RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 ERBB4Q15303 1308 aa14.12□□□□□ -0.15
XRCC3-216ENST00000556682 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-216ENST00000556682 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-216ENST00000556682 ERVV-1B6SEH8 477 aa14.11□□□□□ -0.15
XRCC3-216ENST00000556682 C1QTNF8P60827 252 aa14.11□□□□□ -0.15
XRCC3-216ENST00000556682 ZNF622Q969S3 477 aaKnown RBP eCLIP14.11□□□□□ -0.15
XRCC3-216ENST00000556682 ADCY9O60503 1353 aa14.1□□□□□ -0.15
XRCC3-216ENST00000556682 MYL6BP14649 208 aa14.1□□□□□ -0.15
XRCC3-216ENST00000556682 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
XRCC3-216ENST00000556682 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
XRCC3-216ENST00000556682 ZNF526Q8TF50 670 aaPredicted RBP14.1□□□□□ -0.15
XRCC3-216ENST00000556682 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
XRCC3-216ENST00000556682 CHL1O00533 1208 aa14.09□□□□□ -0.15
XRCC3-216ENST00000556682 C9orf131Q5VYM1 1079 aa14.09□□□□□ -0.15
XRCC3-216ENST00000556682 CCDC24Q8N4L8 307 aa14.09□□□□□ -0.15
XRCC3-216ENST00000556682 CNKSR1Q969H4 720 aa14.09□□□□□ -0.15
XRCC3-216ENST00000556682 TRIM35Q9UPQ4 493 aa14.09□□□□□ -0.15
XRCC3-216ENST00000556682 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
XRCC3-216ENST00000556682 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
XRCC3-216ENST00000556682 DLG5Q8TDM6 1919 aa14.08□□□□□ -0.16
XRCC3-216ENST00000556682 CALD1Q05682 793 aaKnown RBP14.08□□□□□ -0.16
XRCC3-216ENST00000556682 HLFQ16534 295 aa14.08□□□□□ -0.16
XRCC3-216ENST00000556682 MASTLQ96GX5 879 aa14.08□□□□□ -0.16
XRCC3-216ENST00000556682 NYXQ9GZU5 481 aa14.08□□□□□ -0.16
XRCC3-216ENST00000556682 SCN7AQ01118 1682 aa14.07□□□□□ -0.16
XRCC3-216ENST00000556682 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
XRCC3-216ENST00000556682 ANP32CO43423 234 aa14.07□□□□□ -0.16
XRCC3-216ENST00000556682 STYK1Q6J9G0 422 aa14.07□□□□□ -0.16
XRCC3-216ENST00000556682 CFAP44Q96MT7 982 aa14.07□□□□□ -0.16
XRCC3-216ENST00000556682 RNF181Q9P0P0 153 aa14.07□□□□□ -0.16
XRCC3-216ENST00000556682 FAM177BA6PVY3 158 aa14.06□□□□□ -0.16
XRCC3-216ENST00000556682 APAF1O14727 1248 aa14.06□□□□□ -0.16
XRCC3-216ENST00000556682 SRGNP10124 158 aa14.06□□□□□ -0.16
XRCC3-216ENST00000556682 SOGA3Q5TF21 947 aa14.06□□□□□ -0.16
XRCC3-216ENST00000556682 TTLL7Q6ZT98 887 aa14.06□□□□□ -0.16
XRCC3-216ENST00000556682 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
XRCC3-216ENST00000556682 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
XRCC3-216ENST00000556682 HOXB7P09629 217 aa14.05□□□□□ -0.16
XRCC3-216ENST00000556682 LMNB1P20700 586 aa14.05□□□□□ -0.16
XRCC3-216ENST00000556682 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
XRCC3-216ENST00000556682 C21orf2O43822 256 aa14.04□□□□□ -0.16
XRCC3-216ENST00000556682 NPR1P16066 1061 aa14.04□□□□□ -0.16
XRCC3-216ENST00000556682 GNAI1P63096 354 aa14.04□□□□□ -0.16
XRCC3-216ENST00000556682 GIGYF2Q6Y7W6 1299 aaKnown RBP14.04□□□□□ -0.16
XRCC3-216ENST00000556682 BRCA1P38398 1863 aaKnown RBP14.04□□□□□ -0.16
XRCC3-216ENST00000556682 KLRG2A4D1S0 409 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-216ENST00000556682 ALDH1B1P30837 517 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 PDIA6Q15084 440 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 PARP10Q53GL7 1025 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 HSP90AB3PQ58FF7 597 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 PPP1R42Q7Z4L9 355 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
XRCC3-216ENST00000556682 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-216ENST00000556682 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 ZC3H4Q9UPT8 1303 aaKnown RBP14.03□□□□□ -0.16
XRCC3-216ENST00000556682 ARFGEF1Q9Y6D6 1849 aa14.03□□□□□ -0.16
XRCC3-216ENST00000556682 LAMB4A4D0S4 1761 aa14.02□□□□□ -0.16
XRCC3-216ENST00000556682 SENP3-EIF4A1A0A087X0R7 540 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 GPTP24298 496 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 RASSF7Q02833 373 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 HDGFL1Q5TGJ6 251 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 PRPF40BQ6NWY9 871 aaKnown RBP14.02□□□□□ -0.17
XRCC3-216ENST00000556682 COPS6Q7L5N1 327 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 ZNF34Q8IZ26 560 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 CHMP4AQ9BY43 222 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 MRS2Q9HD23 443 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 MBIPQ9NS73 344 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 IFT57Q9NWB7 429 aa14.02□□□□□ -0.17
XRCC3-216ENST00000556682 BCORQ6W2J9 1755 aa14.01□□□□□ -0.17
XRCC3-216ENST00000556682 ANXA1P04083 346 aa14.01□□□□□ -0.17
XRCC3-216ENST00000556682 AIMP1Q12904 312 aaKnown RBP14.01□□□□□ -0.17
XRCC3-216ENST00000556682 PROSER3Q2NL68 480 aa14.01□□□□□ -0.17
XRCC3-216ENST00000556682 DUSP27Q5VZP5 1158 aa14.01□□□□□ -0.17
XRCC3-216ENST00000556682 LRP10Q7Z4F1 713 aa14.01□□□□□ -0.17
XRCC3-216ENST00000556682 XAGE3Q8WTP9 111 aa14.01□□□□□ -0.17
XRCC3-216ENST00000556682 TAOK3Q9H2K8 898 aa14.01□□□□□ -0.17
XRCC3-216ENST00000556682 DBF4Q9UBU7 674 aaPredicted RBP14.01□□□□□ -0.17
XRCC3-216ENST00000556682 IBTKQ9P2D0 1353 aaPredicted RBP14□□□□□ -0.17
XRCC3-216ENST00000556682 NFKBIEO00221 500 aa14□□□□□ -0.17
XRCC3-216ENST00000556682 KIF3CO14782 793 aa14□□□□□ -0.17
XRCC3-216ENST00000556682 ZNF853P0CG23 659 aa14□□□□□ -0.17
XRCC3-216ENST00000556682 KRT24Q2M2I5 525 aa14□□□□□ -0.17
XRCC3-216ENST00000556682 SUSD4Q5VX71 490 aa14□□□□□ -0.17
XRCC3-216ENST00000556682 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
XRCC3-216ENST00000556682 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
XRCC3-216ENST00000556682 RPGRQ92834 1020 aaKnown RBP14□□□□□ -0.17
XRCC3-216ENST00000556682 UBN2Q6ZU65 1347 aa13.99□□□□□ -0.17
XRCC3-216ENST00000556682 TOMM70O94826 608 aa13.99□□□□□ -0.17
XRCC3-216ENST00000556682 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
XRCC3-216ENST00000556682 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
XRCC3-216ENST00000556682 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
XRCC3-216ENST00000556682 UTP14AQ9BVJ6 771 aaKnown RBP13.99□□□□□ -0.17
XRCC3-216ENST00000556682 HYPKQ9NX55 129 aa13.99□□□□□ -0.17
XRCC3-216ENST00000556682 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
XRCC3-216ENST00000556682 LTBP3Q9NS15 1303 aa13.98□□□□□ -0.17
XRCC3-216ENST00000556682 TCIRG1Q13488 830 aa13.98□□□□□ -0.17
XRCC3-216ENST00000556682 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
XRCC3-216ENST00000556682 CCDC184Q52MB2 194 aa13.98□□□□□ -0.17
XRCC3-216ENST00000556682 ANKRD13DQ6ZTN6 518 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms