RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 EML1O00423 815 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 FAM157BP0CG42 384 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 ARAFP10398 606 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 SNRPNP63162 240 aaKnown RBP7.97□□□□□ -1.13
ATXN3-243ENST00000556671 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 LARGE2Q8N3Y3 721 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 OGFOD1Q8N543 542 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 GLMNQ92990 594 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 MKRN1Q9UHC7 482 aaKnown RBP7.97□□□□□ -1.13
ATXN3-243ENST00000556671 TOPBP1Q92547 1522 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 ABCC8Q09428 1581 aa7.97□□□□□ -1.13
ATXN3-243ENST00000556671 M0R2N6 131 aa7.96□□□□□ -1.14
ATXN3-243ENST00000556671 KHNYNO15037 678 aaKnown RBP7.96□□□□□ -1.14
ATXN3-243ENST00000556671 TBCELQ5QJ74 424 aa7.96□□□□□ -1.14
ATXN3-243ENST00000556671 BICDL1Q6ZP65 573 aa7.96□□□□□ -1.14
ATXN3-243ENST00000556671 SIX5Q8N196 739 aa7.96□□□□□ -1.14
ATXN3-243ENST00000556671 DNMBPQ6XZF7 1577 aa7.96□□□□□ -1.14
ATXN3-243ENST00000556671 PALM3A6NDB9 673 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-243ENST00000556671 DKK1O94907 266 aa7.95□□□□□ -1.14
ATXN3-243ENST00000556671 CD33P20138 364 aa7.95□□□□□ -1.14
ATXN3-243ENST00000556671 C7orf43Q8WVR3 580 aa7.95□□□□□ -1.14
ATXN3-243ENST00000556671 DCAF5Q96JK2 942 aa7.95□□□□□ -1.14
ATXN3-243ENST00000556671 GPC6Q9Y625 555 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-243ENST00000556671 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
ATXN3-243ENST00000556671 SERTM1A2A2V5 107 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 A6NJR5 290 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 EFSO43281 561 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 IGHA1P01876 353 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 EPXP11678 715 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 HOXB4P17483 251 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-243ENST00000556671 SH3PXD2AQ5TCZ1 1133 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 GPAT2Q6NUI2 795 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 POTEAQ6S8J7 498 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 TSPAN10Q9H1Z9 355 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-243ENST00000556671 AVENQ9NQS1 362 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-243ENST00000556671 TFIP11Q9UBB9 837 aaKnown RBP7.94□□□□□ -1.14
ATXN3-243ENST00000556671 MKL2Q9ULH7 1088 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 ZNF232Q9UNY5 417 aa7.94□□□□□ -1.14
ATXN3-243ENST00000556671 NEURL1BA8MQ27 555 aa7.93□□□□□ -1.14
ATXN3-243ENST00000556671 PSMA6P60900 246 aaKnown RBP7.93□□□□□ -1.14
ATXN3-243ENST00000556671 LAMC2Q13753 1193 aa7.93□□□□□ -1.14
ATXN3-243ENST00000556671 KLF15Q9UIH9 416 aa7.93□□□□□ -1.14
ATXN3-243ENST00000556671 MAFBQ9Y5Q3 323 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-243ENST00000556671 ADH6P28332 368 aa7.92□□□□□ -1.14
ATXN3-243ENST00000556671 HIRAP54198 1017 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-243ENST00000556671 ZNF594Q96JF6 807 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-243ENST00000556671 BTBD6Q96KE9 485 aa7.92□□□□□ -1.14
ATXN3-243ENST00000556671 RRAGCQ9HB90 399 aa7.92□□□□□ -1.14
ATXN3-243ENST00000556671 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
ATXN3-243ENST00000556671 MARK1Q9P0L2 795 aa7.92□□□□□ -1.14
ATXN3-243ENST00000556671 SOGA1O94964 1423 aa7.92□□□□□ -1.14
ATXN3-243ENST00000556671 SFI1A8K8P3 1242 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 ITGB2P05107 769 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 AMPD1P23109 780 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 PLA2G4EQ3MJ16 856 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 C1orf53Q5VUE5 145 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 LINC00114Q6XXX2 140 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 LRRC69Q6ZNQ3 347 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 FCHSD1Q86WN1 690 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 TSEN2Q8NCE0 465 aaKnown RBP7.91□□□□□ -1.14
ATXN3-243ENST00000556671 RAD54L2Q9Y4B4 1467 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 CUX1P39880 1505 aa7.91□□□□□ -1.14
ATXN3-243ENST00000556671 FGD5Q6ZNL6 1462 aa7.9□□□□□ -1.14
ATXN3-243ENST00000556671 IFT140Q96RY7 1462 aa7.9□□□□□ -1.14
ATXN3-243ENST00000556671 RASA1P20936 1047 aa7.9□□□□□ -1.14
ATXN3-243ENST00000556671 ZNF468Q5VIY5 522 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-243ENST00000556671 RHPN1Q8TCX5 695 aa7.9□□□□□ -1.14
ATXN3-243ENST00000556671 PPP1R12CQ9BZL4 782 aa7.9□□□□□ -1.14
ATXN3-243ENST00000556671 CHMP3Q9Y3E7 222 aa7.9□□□□□ -1.14
ATXN3-243ENST00000556671 RBM19Q9Y4C8 960 aaKnown RBP7.9□□□□□ -1.14
ATXN3-243ENST00000556671 ZNF608Q9ULD9 1512 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-243ENST00000556671 C21orf2O43822 256 aa7.89□□□□□ -1.15
ATXN3-243ENST00000556671 DGKGP49619 791 aa7.89□□□□□ -1.15
ATXN3-243ENST00000556671 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
ATXN3-243ENST00000556671 AQRO60306 1485 aaKnown RBP eCLIP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 POLA1P09884 1462 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 TDRD9Q8NDG6 1382 aaKnown RBP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 COL8A1P27658 744 aa7.88□□□□□ -1.15
ATXN3-243ENST00000556671 SEC13P55735 322 aa7.88□□□□□ -1.15
ATXN3-243ENST00000556671 PCBP4P57723 403 aaKnown RBP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 KANK4Q5T7N3 995 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 CHSY3Q70JA7 882 aa7.88□□□□□ -1.15
ATXN3-243ENST00000556671 ALYREFQ86V81 257 aaKnown RBP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 PHACTR1Q9C0D0 580 aa7.88□□□□□ -1.15
ATXN3-243ENST00000556671 NEUROD4Q9HD90 331 aa7.88□□□□□ -1.15
ATXN3-243ENST00000556671 PRR12Q9ULL5 1215 aa7.88□□□□□ -1.15
ATXN3-243ENST00000556671 HCN4Q9Y3Q4 1203 aa7.88□□□□□ -1.15
ATXN3-243ENST00000556671 TARBP1Q13395 1621 aaKnown RBP7.88□□□□□ -1.15
ATXN3-243ENST00000556671 PPP1R12BO60237 982 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-243ENST00000556671 STAG2Q8N3U4 1231 aa7.87□□□□□ -1.15
ATXN3-243ENST00000556671 EIF4G3O43432 1585 aaKnown RBP7.87□□□□□ -1.15
ATXN3-243ENST00000556671 WRNQ14191 1432 aaPredicted RBP eCLIP7.86□□□□□ -1.15
ATXN3-243ENST00000556671 CHD1O14646 1710 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 ATAD2Q6PL18 1390 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 SYNJ1O43426 1573 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 PIK3R2O00459 728 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 GNB5O14775 395 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 MSTNO14793 375 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 324.1 ms