RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ANKRD31Q8N7Z5 1873 aa29.83■■■□□ 2.37
ACTN1-220ENST00000556433 NFKBIEO00221 500 aa29.83■■■□□ 2.37
ACTN1-220ENST00000556433 EIF4A1P60842 406 aaKnown RBP29.83■■■□□ 2.37
ACTN1-220ENST00000556433 NIP7Q9Y221 180 aaKnown RBP eCLIP29.83■■■□□ 2.37
ACTN1-220ENST00000556433 RGL2O15211 777 aa29.82■■■□□ 2.36
ACTN1-220ENST00000556433 NGEFQ8N5V2 710 aa29.82■■■□□ 2.36
ACTN1-220ENST00000556433 CNKSR1Q969H4 720 aa29.82■■■□□ 2.36
ACTN1-220ENST00000556433 ZC3H4Q9UPT8 1303 aaKnown RBP29.81■■■□□ 2.36
ACTN1-220ENST00000556433 SRGNP10124 158 aa29.81■■■□□ 2.36
ACTN1-220ENST00000556433 STYK1Q6J9G0 422 aa29.81■■■□□ 2.36
ACTN1-220ENST00000556433 DLG5Q8TDM6 1919 aa29.81■■■□□ 2.36
ACTN1-220ENST00000556433 HLFQ16534 295 aa29.8■■■□□ 2.36
ACTN1-220ENST00000556433 TPTE2Q6XPS3 522 aa29.8■■■□□ 2.36
ACTN1-220ENST00000556433 RBM46Q8TBY0 533 aaKnown RBP29.8■■■□□ 2.36
ACTN1-220ENST00000556433 MASTLQ96GX5 879 aa29.8■■■□□ 2.36
ACTN1-220ENST00000556433 BCORQ6W2J9 1755 aa29.8■■■□□ 2.36
ACTN1-220ENST00000556433 RIPK4P57078 832 aa29.79■■■□□ 2.36
ACTN1-220ENST00000556433 RRP7AQ9Y3A4 280 aaKnown RBP29.79■■■□□ 2.36
ACTN1-220ENST00000556433 FAM177BA6PVY3 158 aa29.78■■■□□ 2.36
ACTN1-220ENST00000556433 APLP1P51693 650 aa29.77■■■□□ 2.36
ACTN1-220ENST00000556433 GLTPD2A6NH11 291 aa29.76■■■□□ 2.35
ACTN1-220ENST00000556433 PRPF40BQ6NWY9 871 aaKnown RBP29.76■■■□□ 2.35
ACTN1-220ENST00000556433 TSPYL4Q9UJ04 414 aa29.75■■■□□ 2.35
ACTN1-220ENST00000556433 MYBBP1AQ9BQG0 1328 aaKnown RBP29.74■■■□□ 2.35
ACTN1-220ENST00000556433 CEP350Q5VT06 3117 aa29.74■■■□□ 2.35
ACTN1-220ENST00000556433 MYL6BP14649 208 aa29.74■■■□□ 2.35
ACTN1-220ENST00000556433 COL11A2P13942 1736 aaPredicted RBP29.74■■■□□ 2.35
ACTN1-220ENST00000556433 KDM3BQ7LBC6 1761 aa29.73■■■□□ 2.35
ACTN1-220ENST00000556433 ERVV-1B6SEH8 477 aa29.73■■■□□ 2.35
ACTN1-220ENST00000556433 GTF2E1P29083 439 aaPredicted RBP29.73■■■□□ 2.35
ACTN1-220ENST00000556433 TMPOP42166 694 aaKnown RBP29.73■■■□□ 2.35
ACTN1-220ENST00000556433 NPR1P16066 1061 aa29.72■■■□□ 2.35
ACTN1-220ENST00000556433 FSTL1Q12841 308 aa29.72■■■□□ 2.35
ACTN1-220ENST00000556433 SOGA3Q5TF21 947 aa29.72■■■□□ 2.35
ACTN1-220ENST00000556433 KIF6Q6ZMV9 814 aa29.72■■■□□ 2.35
ACTN1-220ENST00000556433 TTLL7Q6ZT98 887 aa29.72■■■□□ 2.35
ACTN1-220ENST00000556433 TAOK3Q9H2K8 898 aa29.72■■■□□ 2.35
ACTN1-220ENST00000556433 MAP3K15Q6ZN16 1313 aa29.71■■■□□ 2.35
ACTN1-220ENST00000556433 KLRG2A4D1S0 409 aaPredicted RBP29.71■■■□□ 2.35
ACTN1-220ENST00000556433 ERFEQ4G0M1 354 aa29.71■■■□□ 2.35
ACTN1-220ENST00000556433 VEGFAP15692 232 aaPredicted RBP29.7■■■□□ 2.35
ACTN1-220ENST00000556433 LMOD3Q0VAK6 560 aa29.7■■■□□ 2.35
ACTN1-220ENST00000556433 DPY19L2Q6NUT2 758 aa29.7■■■□□ 2.35
ACTN1-220ENST00000556433 LTBP3Q9NS15 1303 aa29.7■■■□□ 2.34
ACTN1-220ENST00000556433 SLX4Q8IY92 1834 aa29.69■■■□□ 2.34
ACTN1-220ENST00000556433 LAMB4A4D0S4 1761 aa29.69■■■□□ 2.34
ACTN1-220ENST00000556433 CCDC88AQ3V6T2 1871 aa29.68■■■□□ 2.34
ACTN1-220ENST00000556433 CCDC146Q8IYE0 955 aa29.68■■■□□ 2.34
ACTN1-220ENST00000556433 C7orf43Q8WVR3 580 aa29.68■■■□□ 2.34
ACTN1-220ENST00000556433 NYXQ9GZU5 481 aa29.68■■■□□ 2.34
ACTN1-220ENST00000556433 ZBTB3Q9H5J0 574 aa29.68■■■□□ 2.34
ACTN1-220ENST00000556433 BABAM1Q9NWV8 329 aa29.68■■■□□ 2.34
ACTN1-220ENST00000556433 EIF2S2P20042 333 aaKnown RBP29.67■■■□□ 2.34
ACTN1-220ENST00000556433 NEUROD2Q15784 382 aa29.67■■■□□ 2.34
ACTN1-220ENST00000556433 ERBB4Q15303 1308 aa29.67■■■□□ 2.34
ACTN1-220ENST00000556433 IFFO2Q5TF58 517 aa29.66■■■□□ 2.34
ACTN1-220ENST00000556433 GPTP24298 496 aa29.65■■■□□ 2.34
ACTN1-220ENST00000556433 WDR43Q15061 677 aaKnown RBP eCLIP29.65■■■□□ 2.34
ACTN1-220ENST00000556433 CCDC93Q567U6 631 aa29.65■■■□□ 2.34
ACTN1-220ENST00000556433 NUTM1Q86Y26 1132 aa29.65■■■□□ 2.34
ACTN1-220ENST00000556433 SMC1BQ8NDV3 1235 aa29.65■■■□□ 2.34
ACTN1-220ENST00000556433 TNRC6CQ9HCJ0 1690 aaKnown RBP29.65■■■□□ 2.34
ACTN1-220ENST00000556433 FER1L6Q2WGJ9 1857 aa29.64■■■□□ 2.34
ACTN1-220ENST00000556433 ALDH1B1P30837 517 aa29.63■■■□□ 2.33
ACTN1-220ENST00000556433 DNAJC5GQ8N7S2 189 aa29.63■■■□□ 2.33
ACTN1-220ENST00000556433 RUNDC1Q96C34 613 aa29.63■■■□□ 2.33
ACTN1-220ENST00000556433 POTECB2RU33 542 aa29.61■■■□□ 2.33
ACTN1-220ENST00000556433 PDIA6Q15084 440 aa29.61■■■□□ 2.33
ACTN1-220ENST00000556433 SUSD4Q5VX71 490 aa29.61■■■□□ 2.33
ACTN1-220ENST00000556433 GIGYF2Q6Y7W6 1299 aaKnown RBP29.61■■■□□ 2.33
ACTN1-220ENST00000556433 TIAM2Q8IVF5 1701 aa29.6■■■□□ 2.33
ACTN1-220ENST00000556433 OLFM4Q6UX06 510 aa29.6■■■□□ 2.33
ACTN1-220ENST00000556433 ZNF34Q8IZ26 560 aa29.6■■■□□ 2.33
ACTN1-220ENST00000556433 ADAMTS8Q9UP79 889 aa29.6■■■□□ 2.33
ACTN1-220ENST00000556433 CACNA1SQ13698 1873 aa29.59■■■□□ 2.33
ACTN1-220ENST00000556433 HTRA3P83110 453 aa29.59■■■□□ 2.33
ACTN1-220ENST00000556433 UBN2Q6ZU65 1347 aa29.59■■■□□ 2.33
ACTN1-220ENST00000556433 ABCC12Q96J65 1359 aa29.59■■■□□ 2.33
ACTN1-220ENST00000556433 ANXA1P04083 346 aa29.58■■■□□ 2.33
ACTN1-220ENST00000556433 NUP98P52948 1817 aa29.58■■■□□ 2.33
ACTN1-220ENST00000556433 FKBP4Q02790 459 aaKnown RBP eCLIP29.58■■■□□ 2.33
ACTN1-220ENST00000556433 PROSER3Q2NL68 480 aa29.58■■■□□ 2.33
ACTN1-220ENST00000556433 CRY2Q49AN0 593 aa29.58■■■□□ 2.33
ACTN1-220ENST00000556433 LRP10Q7Z4F1 713 aa29.58■■■□□ 2.33
ACTN1-220ENST00000556433 RTKN2Q8IZC4 609 aa29.58■■■□□ 2.33
ACTN1-220ENST00000556433 LAS1LQ9Y4W2 734 aaKnown RBP29.58■■■□□ 2.33
ACTN1-220ENST00000556433 ARFGEF2Q9Y6D5 1785 aa29.57■■■□□ 2.32
ACTN1-220ENST00000556433 CHL1O00533 1208 aa29.57■■■□□ 2.32
ACTN1-220ENST00000556433 DDNO94850 711 aaPredicted RBP29.57■■■□□ 2.32
ACTN1-220ENST00000556433 NECTIN2Q92692 538 aa29.57■■■□□ 2.32
ACTN1-220ENST00000556433 TRIM35Q9UPQ4 493 aa29.57■■■□□ 2.32
ACTN1-220ENST00000556433 DICER1Q9UPY3 1922 aaKnown RBP29.56■■■□□ 2.32
ACTN1-220ENST00000556433 PRKRIP1Q9H875 184 aaPredicted RBP29.56■■■□□ 2.32
ACTN1-220ENST00000556433 ZNF277Q9NRM2 450 aaPredicted RBP29.56■■■□□ 2.32
ACTN1-220ENST00000556433 PPP1R42Q7Z4L9 355 aa29.55■■■□□ 2.32
ACTN1-220ENST00000556433 RPGRQ92834 1020 aaKnown RBP29.55■■■□□ 2.32
ACTN1-220ENST00000556433 IBTKQ9P2D0 1353 aaPredicted RBP29.54■■■□□ 2.32
ACTN1-220ENST00000556433 PARP10Q53GL7 1025 aa29.54■■■□□ 2.32
ACTN1-220ENST00000556433 NTSR2O95665 410 aa29.53■■■□□ 2.32
ACTN1-220ENST00000556433 KRT24Q2M2I5 525 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms