RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 CNTLNQ9NXG0 1405 aa6.92□□□□□ -1.3
ATXN3-238ENST00000556288 EIF2AK4Q9P2K8 1649 aaKnown RBP6.91□□□□□ -1.3
ATXN3-238ENST00000556288 USP17L3A6NCW0 530 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 USP17L4A6NCW7 530 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 LZTS3O60299 673 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-238ENST00000556288 BMP1P13497 986 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 RELBQ01201 579 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 NCOA4Q13772 614 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 MRPL14Q6P1L8 145 aaKnown RBP6.91□□□□□ -1.3
ATXN3-238ENST00000556288 USP17L2Q6R6M4 530 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 USP17L1Q7RTZ2 530 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 KCTD17Q8N5Z5 321 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 MEIOBQ8N635 442 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 TSEN34Q9BSV6 310 aaKnown RBP6.91□□□□□ -1.3
ATXN3-238ENST00000556288 SERPINA10Q9UK55 444 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 MYO5BQ9ULV0 1848 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 NCOA1Q15788 1441 aa6.91□□□□□ -1.3
ATXN3-238ENST00000556288 CAMSAP1Q5T5Y3 1602 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 ATP5J2-PTCD1G3V325 749 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 ADH1AP07327 375 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 BMP2P12643 396 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 LMOD1P29536 600 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-238ENST00000556288 GSK3AP49840 483 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 SCARF1Q14162 830 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 C6orf118Q5T5N4 469 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 TRIM46Q7Z4K8 759 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 IRF7Q92985 503 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 OSBPL3Q9H4L5 887 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 C1orf115Q9H7X2 142 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 NOD1Q9Y239 953 aa6.9□□□□□ -1.3
ATXN3-238ENST00000556288 MAFBQ9Y5Q3 323 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-238ENST00000556288 PTPRKQ15262 1439 aa6.9□□□□□ -1.31
ATXN3-238ENST00000556288 SHANK2Q9UPX8 1470 aa6.9□□□□□ -1.31
ATXN3-238ENST00000556288 RFX1P22670 979 aa6.89□□□□□ -1.31
ATXN3-238ENST00000556288 PTGIRP43119 386 aa6.89□□□□□ -1.31
ATXN3-238ENST00000556288 CYP2U1Q7Z449 544 aa6.89□□□□□ -1.31
ATXN3-238ENST00000556288 PLEKHM2Q8IWE5 1019 aa6.89□□□□□ -1.31
ATXN3-238ENST00000556288 LINC00528Q8N1L1 170 aa6.89□□□□□ -1.31
ATXN3-238ENST00000556288 PURBQ96QR8 312 aaKnown RBP6.89□□□□□ -1.31
ATXN3-238ENST00000556288 ZNF395Q9H8N7 513 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-238ENST00000556288 UHRF1BP1Q6BDS2 1440 aa6.89□□□□□ -1.31
ATXN3-238ENST00000556288 ANKRD50Q9ULJ7 1429 aa6.89□□□□□ -1.31
ATXN3-238ENST00000556288 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
ATXN3-238ENST00000556288 ZC3H13Q5T200 1668 aaKnown RBP6.89□□□□□ -1.31
ATXN3-238ENST00000556288 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
ATXN3-238ENST00000556288 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
ATXN3-238ENST00000556288 NUP155O75694 1391 aa6.88□□□□□ -1.31
ATXN3-238ENST00000556288 ERBB4Q15303 1308 aa6.88□□□□□ -1.31
ATXN3-238ENST00000556288 CCDC82Q8N4S0 544 aa6.88□□□□□ -1.31
ATXN3-238ENST00000556288 ZFP42Q96MM3 310 aa6.88□□□□□ -1.31
ATXN3-238ENST00000556288 MKRN1Q9UHC7 482 aaKnown RBP6.88□□□□□ -1.31
ATXN3-238ENST00000556288 STRCQ7RTU9 1775 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 RRBP1Q9P2E9 1410 aaKnown RBP6.87□□□□□ -1.31
ATXN3-238ENST00000556288 TNRQ92752 1358 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 VEGFBP49765 207 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 CFAP70Q5T0N1 1121 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 TRIM50Q86XT4 487 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 NPAS3Q8IXF0 933 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 KDF1Q8NAX2 398 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-238ENST00000556288 MYO3AQ8NEV4 1616 aa6.87□□□□□ -1.31
ATXN3-238ENST00000556288 ABCC3O15438 1527 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 ADGRL2O95490 1459 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATXN3-238ENST00000556288 KIF1BO60333 1816 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 A0A1W2PRU2 124 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 MEN1O00255 615 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 GNRH1P01148 92 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 GTF2IP78347 998 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 PSME1Q06323 249 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-238ENST00000556288 INSM2Q96T92 566 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-238ENST00000556288 VRTNQ9H8Y1 702 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 DEPDC5O75140 1603 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 MROH1Q8NDA8 1641 aa6.86□□□□□ -1.31
ATXN3-238ENST00000556288 LMTK3Q96Q04 1460 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 ROCK1Q13464 1354 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 POLR1AO95602 1720 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-238ENST00000556288 E9PCH4 1651 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 H3BM21 787 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 SPINT1O43278 529 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 RASA1P20936 1047 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 CDCA8Q53HL2 280 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 NLRP3Q96P20 1036 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 ARID3AQ99856 593 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 ARHGEF10LQ9HCE6 1279 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 POLMQ9NP87 494 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-238ENST00000556288 RAB6BQ9NRW1 208 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 PCDHGA11Q9Y5H2 935 aa6.85□□□□□ -1.31
ATXN3-238ENST00000556288 TET3O43151 1660 aa6.84□□□□□ -1.31
ATXN3-238ENST00000556288 STAU1O95793 577 aaKnown RBP6.84□□□□□ -1.31
ATXN3-238ENST00000556288 CTSOP43234 321 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-238ENST00000556288 ATP1A2P50993 1020 aa6.84□□□□□ -1.31
ATXN3-238ENST00000556288 ANKLE2Q86XL3 938 aa6.84□□□□□ -1.31
ATXN3-238ENST00000556288 OGFOD1Q8N543 542 aa6.84□□□□□ -1.31
ATXN3-238ENST00000556288 DNAAF2Q9NVR5 837 aaKnown RBP6.84□□□□□ -1.31
ATXN3-238ENST00000556288 PZPP20742 1482 aa6.84□□□□□ -1.31
ATXN3-238ENST00000556288 NPATQ14207 1427 aa6.84□□□□□ -1.32
ATXN3-238ENST00000556288 PIK3C2BO00750 1634 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms