RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 ZNF831Q5JPB2 1677 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 TCERG1O14776 1098 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 BCAR3O75815 825 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 A1BGP04217 495 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 CRKLP46109 303 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 PSEN1P49768 467 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 KCNQ4P56696 695 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 PDIA6Q15084 440 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 LINC00116Q8NCU8 138 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
MTHFD1-213ENST00000556284 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 KIF16BQ96L93 1317 aa12.83□□□□□ -0.36
MTHFD1-213ENST00000556284 LY75O60449 1722 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 EP400Q96L91 3159 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 CLCN6P51797 869 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 PROSER3Q2NL68 480 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 ILDR2Q71H61 639 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 ARHGAP45Q92619 1136 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-213ENST00000556284 ANXA1P04083 346 aa12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 MYL6BP14649 208 aa12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 EIF5P55010 431 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 DEFB132Q7Z7B7 95 aa12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 NOB1Q9ULX3 412 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 PTPRCP08575 1304 aa12.81□□□□□ -0.36
MTHFD1-213ENST00000556284 C5P01031 1676 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 TJP1Q07157 1748 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 RPS6KA4O75676 772 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 FLIIQ13045 1269 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 ZKSCAN2Q63HK3 967 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 COPS6Q7L5N1 327 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 G2E3Q7L622 706 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 AK7Q96M32 723 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
MTHFD1-213ENST00000556284 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 A0A087WZG4 1122 aa12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 MS4A1P11836 297 aa12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 XAGE3Q8WTP9 111 aa12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 RTCBQ9Y3I0 505 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-213ENST00000556284 GNPATO15228 680 aa12.78□□□□□ -0.36
MTHFD1-213ENST00000556284 RRP1P56182 461 aaKnown RBP12.78□□□□□ -0.36
MTHFD1-213ENST00000556284 FKBP5Q13451 457 aaPredicted RBP12.78□□□□□ -0.36
MTHFD1-213ENST00000556284 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
MTHFD1-213ENST00000556284 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
MTHFD1-213ENST00000556284 AIMP1Q12904 312 aaKnown RBP12.77□□□□□ -0.37
MTHFD1-213ENST00000556284 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.37
MTHFD1-213ENST00000556284 KSR2Q6VAB6 950 aa12.77□□□□□ -0.37
MTHFD1-213ENST00000556284 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-213ENST00000556284 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 ERVV-1B6SEH8 477 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 PLIN1O60240 522 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 TRIM27P14373 513 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 SSFA2P28290 1259 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 PDE3AQ14432 1141 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 KIF6Q6ZMV9 814 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 FLAD1Q8NFF5 587 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 STK32BQ9NY57 414 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-213ENST00000556284 C4BP0C0L5 1744 aa12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 COL15A1P39059 1388 aa12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 MAP3K15Q6ZN16 1313 aa12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 DNAAF4Q8WXU2 420 aa12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 RREB1Q92766 1687 aa12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
MTHFD1-213ENST00000556284 ARXQ96QS3 562 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms