RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 IPO8O15397 1037 aaKnown RBP9.74□□□□□ -0.85
TDP1-214ENST00000556063 RARSP54136 660 aaKnown RBP9.74□□□□□ -0.85
TDP1-214ENST00000556063 HSP90AB3PQ58FF7 597 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 CLEC4GQ6UXB4 293 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 ANKRD13DQ6ZTN6 518 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 PLBD2Q8NHP8 589 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 SSH1Q8WYL5 1049 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 MAP3K15Q6ZN16 1313 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 KIF16BQ96L93 1317 aa9.74□□□□□ -0.85
TDP1-214ENST00000556063 USP42Q9H9J4 1324 aaKnown RBP9.74□□□□□ -0.85
TDP1-214ENST00000556063 TUBGCP6Q96RT7 1819 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 BRPF1P55201 1214 aaPredicted RBP9.73□□□□□ -0.85
TDP1-214ENST00000556063 FLIIQ13045 1269 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 FKBP5Q13451 457 aaPredicted RBP9.73□□□□□ -0.85
TDP1-214ENST00000556063 USPL1Q5W0Q7 1092 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 TTLL7Q6ZT98 887 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 SMIM5Q71RC9 77 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 LRP10Q7Z4F1 713 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 AMIGO3Q86WK7 504 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 MRPL50Q8N5N7 158 aaKnown RBP9.73□□□□□ -0.85
TDP1-214ENST00000556063 MTFR1LQ9H019 292 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 PHAXQ9H814 394 aaKnown RBP9.73□□□□□ -0.85
TDP1-214ENST00000556063 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 PTPRCP08575 1304 aa9.73□□□□□ -0.85
TDP1-214ENST00000556063 CAMTA2O94983 1202 aa9.72□□□□□ -0.85
TDP1-214ENST00000556063 GYS1P13807 737 aa9.72□□□□□ -0.85
TDP1-214ENST00000556063 POLD1P28340 1107 aa9.72□□□□□ -0.85
TDP1-214ENST00000556063 NEXNQ0ZGT2 675 aa9.72□□□□□ -0.85
TDP1-214ENST00000556063 KSR2Q6VAB6 950 aa9.72□□□□□ -0.85
TDP1-214ENST00000556063 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
TDP1-214ENST00000556063 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
TDP1-214ENST00000556063 API5Q9BZZ5 524 aaKnown RBP9.72□□□□□ -0.85
TDP1-214ENST00000556063 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
TDP1-214ENST00000556063 SRP68Q9UHB9 627 aaKnown RBP9.72□□□□□ -0.85
TDP1-214ENST00000556063 C4AP0C0L4 1744 aa9.71□□□□□ -0.85
TDP1-214ENST00000556063 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.71□□□□□ -0.86
TDP1-214ENST00000556063 ARHGAP45Q92619 1136 aa9.71□□□□□ -0.86
TDP1-214ENST00000556063 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
TDP1-214ENST00000556063 SPON1Q9HCB6 807 aa9.71□□□□□ -0.86
TDP1-214ENST00000556063 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 NPHP1O15259 732 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 ZBTB7AO95365 584 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 MS4A1P11836 297 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 TCIRG1Q13488 830 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 FKBP8Q14318 412 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 PARP10Q53GL7 1025 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 G2E3Q7L622 706 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 PI4KAP1Q8N8J0 262 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 DNAAF4Q8WXU2 420 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 METTL22Q9BUU2 404 aaPredicted RBP9.7□□□□□ -0.86
TDP1-214ENST00000556063 NIP7Q9Y221 180 aaKnown RBP eCLIP9.7□□□□□ -0.86
TDP1-214ENST00000556063 MAP3K2Q9Y2U5 619 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 PARP3Q9Y6F1 533 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 NUP98P52948 1817 aa9.7□□□□□ -0.86
TDP1-214ENST00000556063 MMP10P09238 476 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 SCN7AQ01118 1682 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 NFIXQ14938 502 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 HLFQ16534 295 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 ZKSCAN2Q63HK3 967 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 MSL1Q68DK7 614 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 BICDL1Q6ZP65 573 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 FRAT1Q92837 279 aaPredicted RBP9.69□□□□□ -0.86
TDP1-214ENST00000556063 PDGFDQ9GZP0 370 aaPredicted RBP9.69□□□□□ -0.86
TDP1-214ENST00000556063 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
TDP1-214ENST00000556063 NOB1Q9ULX3 412 aaKnown RBP9.69□□□□□ -0.86
TDP1-214ENST00000556063 ATF5Q9Y2D1 282 aaPredicted RBP9.69□□□□□ -0.86
TDP1-214ENST00000556063 BCORQ6W2J9 1755 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 ATP10DQ9P241 1426 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 CARMIL3Q8ND23 1372 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 BCAR3O75815 825 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
TDP1-214ENST00000556063 GPTP24298 496 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
TDP1-214ENST00000556063 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
TDP1-214ENST00000556063 TBC1D9BQ66K14 1250 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 TPTE2Q6XPS3 522 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 PPP1R42Q7Z4L9 355 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 NBPF5PQ86XG9 351 aaPredicted RBP9.68□□□□□ -0.86
TDP1-214ENST00000556063 LINS1Q8NG48 757 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 NYXQ9GZU5 481 aa9.68□□□□□ -0.86
TDP1-214ENST00000556063 ADCY9O60503 1353 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 SERPINB2P05120 415 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 HSP90B1P14625 803 aaKnown RBP9.67□□□□□ -0.86
TDP1-214ENST00000556063 TM4SF1P30408 202 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 CCT4P50991 539 aaKnown RBP9.67□□□□□ -0.86
TDP1-214ENST00000556063 SLC4A10Q6U841 1118 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 ATF7IPQ6VMQ6 1270 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 FTSJ3Q8IY81 847 aaKnown RBP9.67□□□□□ -0.86
TDP1-214ENST00000556063 ZNF34Q8IZ26 560 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 MYD88Q99836 296 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 ISCA1Q9BUE6 129 aa9.67□□□□□ -0.86
TDP1-214ENST00000556063 ARFGEF2Q9Y6D5 1785 aa9.66□□□□□ -0.86
TDP1-214ENST00000556063 F6X3S4 739 aa9.66□□□□□ -0.86
TDP1-214ENST00000556063 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
TDP1-214ENST00000556063 ALDH1L1O75891 902 aa9.66□□□□□ -0.86
TDP1-214ENST00000556063 ST5P78524 1137 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms