RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SRGNP10124 158 aa19.27■□□□□ 0.68
CHMP4BP1-201ENST00000556017 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
CHMP4BP1-201ENST00000556017 DZIP3Q86Y13 1208 aaKnown RBP19.27■□□□□ 0.68
CHMP4BP1-201ENST00000556017 C7orf43Q8WVR3 580 aa19.27■□□□□ 0.68
CHMP4BP1-201ENST00000556017 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
CHMP4BP1-201ENST00000556017 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.67
CHMP4BP1-201ENST00000556017 SETDB2Q96T68 719 aa19.26■□□□□ 0.67
CHMP4BP1-201ENST00000556017 PDZRN3Q9UPQ7 1066 aa19.26■□□□□ 0.67
CHMP4BP1-201ENST00000556017 KDM3BQ7LBC6 1761 aa19.26■□□□□ 0.67
CHMP4BP1-201ENST00000556017 CNBD1Q8NA66 436 aa19.25■□□□□ 0.67
CHMP4BP1-201ENST00000556017 KLRG2A4D1S0 409 aaPredicted RBP19.24■□□□□ 0.67
CHMP4BP1-201ENST00000556017 STYK1Q6J9G0 422 aa19.24■□□□□ 0.67
CHMP4BP1-201ENST00000556017 PRPF40BQ6NWY9 871 aaKnown RBP19.24■□□□□ 0.67
CHMP4BP1-201ENST00000556017 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
CHMP4BP1-201ENST00000556017 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHMP4BP1-201ENST00000556017 COL13A1Q5TAT6 717 aaPredicted RBP19.23■□□□□ 0.67
CHMP4BP1-201ENST00000556017 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
CHMP4BP1-201ENST00000556017 CFAP53Q96M91 514 aa19.23■□□□□ 0.67
CHMP4BP1-201ENST00000556017 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
CHMP4BP1-201ENST00000556017 POTEIP0CG38 1075 aa19.22■□□□□ 0.67
CHMP4BP1-201ENST00000556017 POTEJP0CG39 1038 aa19.22■□□□□ 0.67
CHMP4BP1-201ENST00000556017 ERFEQ4G0M1 354 aa19.22■□□□□ 0.67
CHMP4BP1-201ENST00000556017 NUP98P52948 1817 aa19.22■□□□□ 0.67
CHMP4BP1-201ENST00000556017 SNED1Q8TER0 1413 aa19.21■□□□□ 0.67
CHMP4BP1-201ENST00000556017 CNKSR1Q969H4 720 aa19.21■□□□□ 0.67
CHMP4BP1-201ENST00000556017 MASTLQ96GX5 879 aa19.21■□□□□ 0.67
CHMP4BP1-201ENST00000556017 HLFQ16534 295 aa19.2■□□□□ 0.66
CHMP4BP1-201ENST00000556017 TAOK3Q9H2K8 898 aa19.2■□□□□ 0.66
CHMP4BP1-201ENST00000556017 NUDCQ9Y266 331 aa19.2■□□□□ 0.66
CHMP4BP1-201ENST00000556017 SCN4AP35499 1836 aa19.19■□□□□ 0.66
CHMP4BP1-201ENST00000556017 HTATSF1O43719 755 aaKnown RBP19.19■□□□□ 0.66
CHMP4BP1-201ENST00000556017 DDNO94850 711 aaPredicted RBP19.19■□□□□ 0.66
CHMP4BP1-201ENST00000556017 ST5P78524 1137 aa19.19■□□□□ 0.66
CHMP4BP1-201ENST00000556017 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
CHMP4BP1-201ENST00000556017 MIS18AQ9NYP9 233 aa19.19■□□□□ 0.66
CHMP4BP1-201ENST00000556017 RGL2O15211 777 aa19.18■□□□□ 0.66
CHMP4BP1-201ENST00000556017 DPY19L2Q6NUT2 758 aa19.18■□□□□ 0.66
CHMP4BP1-201ENST00000556017 NBPF5PQ86XG9 351 aaPredicted RBP19.18■□□□□ 0.66
CHMP4BP1-201ENST00000556017 ADAMTSL1Q8N6G6 1762 aa19.17■□□□□ 0.66
CHMP4BP1-201ENST00000556017 TAF7Q15545 349 aaPredicted RBP19.17■□□□□ 0.66
CHMP4BP1-201ENST00000556017 RTF1Q92541 710 aaKnown RBP19.17■□□□□ 0.66
CHMP4BP1-201ENST00000556017 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
CHMP4BP1-201ENST00000556017 NPR1P16066 1061 aa19.16■□□□□ 0.66
CHMP4BP1-201ENST00000556017 NIP7Q9Y221 180 aaKnown RBP eCLIP19.16■□□□□ 0.66
CHMP4BP1-201ENST00000556017 ABCC12Q96J65 1359 aa19.15■□□□□ 0.66
CHMP4BP1-201ENST00000556017 COL4A5P29400 1685 aa19.14■□□□□ 0.66
CHMP4BP1-201ENST00000556017 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
CHMP4BP1-201ENST00000556017 L3MBTL3Q96JM7 780 aaPredicted RBP19.14■□□□□ 0.65
CHMP4BP1-201ENST00000556017 ZNF652Q9Y2D9 606 aa19.14■□□□□ 0.65
CHMP4BP1-201ENST00000556017 SOGA3Q5TF21 947 aa19.13■□□□□ 0.65
CHMP4BP1-201ENST00000556017 CHADLQ6NUI6 762 aa19.13■□□□□ 0.65
CHMP4BP1-201ENST00000556017 SLC51AQ86UW1 340 aa19.13■□□□□ 0.65
CHMP4BP1-201ENST00000556017 ZNF541Q9H0D2 1346 aa19.13■□□□□ 0.65
CHMP4BP1-201ENST00000556017 NPHP1O15259 732 aa19.12■□□□□ 0.65
CHMP4BP1-201ENST00000556017 EIF4A1P60842 406 aaKnown RBP19.12■□□□□ 0.65
CHMP4BP1-201ENST00000556017 CRY2Q49AN0 593 aa19.12■□□□□ 0.65
CHMP4BP1-201ENST00000556017 CCDC93Q567U6 631 aa19.12■□□□□ 0.65
CHMP4BP1-201ENST00000556017 TPTE2Q6XPS3 522 aa19.12■□□□□ 0.65
CHMP4BP1-201ENST00000556017 THUMPD2Q9BTF0 503 aaKnown RBP19.12■□□□□ 0.65
CHMP4BP1-201ENST00000556017 PASKQ96RG2 1323 aa19.11■□□□□ 0.65
CHMP4BP1-201ENST00000556017 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
CHMP4BP1-201ENST00000556017 HSPA1AP0DMV8 641 aaKnown RBP19.11■□□□□ 0.65
CHMP4BP1-201ENST00000556017 HSPA1BP0DMV9 641 aaKnown RBP19.11■□□□□ 0.65
CHMP4BP1-201ENST00000556017 FKBP4Q02790 459 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHMP4BP1-201ENST00000556017 TTLL7Q6ZT98 887 aa19.11■□□□□ 0.65
CHMP4BP1-201ENST00000556017 ZNF277Q9NRM2 450 aaPredicted RBP19.11■□□□□ 0.65
CHMP4BP1-201ENST00000556017 UBN2Q6ZU65 1347 aa19.1■□□□□ 0.65
CHMP4BP1-201ENST00000556017 TAF1DQ9H5J8 278 aaPredicted RBP19.1■□□□□ 0.65
CHMP4BP1-201ENST00000556017 LTBP1Q14766 1721 aa19.1■□□□□ 0.65
CHMP4BP1-201ENST00000556017 RIC1Q4ADV7 1423 aa19.09■□□□□ 0.65
CHMP4BP1-201ENST00000556017 ERVV-1B6SEH8 477 aa19.09■□□□□ 0.65
CHMP4BP1-201ENST00000556017 LRP10Q7Z4F1 713 aa19.09■□□□□ 0.65
CHMP4BP1-201ENST00000556017 NUTM1Q86Y26 1132 aa19.09■□□□□ 0.65
CHMP4BP1-201ENST00000556017 CREBZFQ9NS37 354 aa19.09■□□□□ 0.65
CHMP4BP1-201ENST00000556017 MAP3K15Q6ZN16 1313 aa19.08■□□□□ 0.65
CHMP4BP1-201ENST00000556017 FZD9O00144 591 aa19.08■□□□□ 0.64
CHMP4BP1-201ENST00000556017 ITGBL1O95965 494 aaPredicted RBP19.08■□□□□ 0.64
CHMP4BP1-201ENST00000556017 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
CHMP4BP1-201ENST00000556017 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
CHMP4BP1-201ENST00000556017 HOXA10P31260 410 aaPredicted RBP19.06■□□□□ 0.64
CHMP4BP1-201ENST00000556017 C3orf67Q6ZVT6 689 aa19.06■□□□□ 0.64
CHMP4BP1-201ENST00000556017 LDHDQ86WU2 507 aa19.06■□□□□ 0.64
CHMP4BP1-201ENST00000556017 SYNE4Q8N205 404 aa19.06■□□□□ 0.64
CHMP4BP1-201ENST00000556017 RRP7AQ9Y3A4 280 aaKnown RBP19.06■□□□□ 0.64
CHMP4BP1-201ENST00000556017 IBTKQ9P2D0 1353 aaPredicted RBP19.06■□□□□ 0.64
CHMP4BP1-201ENST00000556017 ALDH1B1P30837 517 aa19.05■□□□□ 0.64
CHMP4BP1-201ENST00000556017 IARSP41252 1262 aaKnown RBP19.05■□□□□ 0.64
CHMP4BP1-201ENST00000556017 PDIA6Q15084 440 aa19.05■□□□□ 0.64
CHMP4BP1-201ENST00000556017 ZNF34Q8IZ26 560 aa19.05■□□□□ 0.64
CHMP4BP1-201ENST00000556017 RTKN2Q8IZC4 609 aa19.05■□□□□ 0.64
CHMP4BP1-201ENST00000556017 MKRN1Q9UHC7 482 aaKnown RBP19.05■□□□□ 0.64
CHMP4BP1-201ENST00000556017 LAMB2P55268 1798 aa19.05■□□□□ 0.64
CHMP4BP1-201ENST00000556017 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
CHMP4BP1-201ENST00000556017 GPTP24298 496 aa19.04■□□□□ 0.64
CHMP4BP1-201ENST00000556017 SUSD4Q5VX71 490 aa19.04■□□□□ 0.64
CHMP4BP1-201ENST00000556017 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
CHMP4BP1-201ENST00000556017 PSMD1Q99460 953 aa19.04■□□□□ 0.64
CHMP4BP1-201ENST00000556017 CNTNAP1P78357 1384 aa19.04■□□□□ 0.64
CHMP4BP1-201ENST00000556017 ANKRD36CQ5JPF3 1778 aa19.04■□□□□ 0.64
CHMP4BP1-201ENST00000556017 NTSR2O95665 410 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms