RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 CLSTN2Q9H4D0 955 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 CLIP2Q9UDT6 1046 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 PREX1Q8TCU6 1659 aa9.22□□□□□ -0.93
CHD8-209ENST00000555935 KIF2AO00139 706 aaPredicted RBP9.21□□□□□ -0.93
CHD8-209ENST00000555935 LARGE1O95461 756 aa9.21□□□□□ -0.93
CHD8-209ENST00000555935 LIG1P18858 919 aa9.21□□□□□ -0.93
CHD8-209ENST00000555935 SARM1Q6SZW1 724 aa9.21□□□□□ -0.93
CHD8-209ENST00000555935 CACTINQ8WUQ7 758 aaKnown RBP9.21□□□□□ -0.93
CHD8-209ENST00000555935 ZSWIM6Q9HCJ5 1215 aa9.21□□□□□ -0.93
CHD8-209ENST00000555935 PPP6R1Q9UPN7 881 aa9.21□□□□□ -0.93
CHD8-209ENST00000555935 CYP46A1Q9Y6A2 500 aa9.21□□□□□ -0.93
CHD8-209ENST00000555935 GOLGA6L4A6NEF3 574 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 FLIIQ13045 1269 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 KMT5BQ4FZB7 885 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 KCND1Q9NSA2 647 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 DACT1Q9NYF0 836 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 NRBP1Q9UHY1 535 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 TSPYL4Q9UJ04 414 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 LRRFIP2Q9Y608 721 aaKnown RBP9.21□□□□□ -0.94
CHD8-209ENST00000555935 MAP3K5Q99683 1374 aa9.21□□□□□ -0.94
CHD8-209ENST00000555935 ZNF165P49910 485 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 PTPN14Q15678 1187 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 LARP1BQ659C4 914 aaKnown RBP9.2□□□□□ -0.94
CHD8-209ENST00000555935 MRFAP1L1Q96HT8 127 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 ZRANB1Q9UGI0 708 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
CHD8-209ENST00000555935 WASLO00401 505 aaPredicted RBP9.2□□□□□ -0.94
CHD8-209ENST00000555935 NAA30Q147X3 362 aaPredicted RBP9.2□□□□□ -0.94
CHD8-209ENST00000555935 CAMK4Q16566 473 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 CCDC30Q5VVM6 783 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 LRRC8AQ8IWT6 810 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 KIF1BPQ96EK5 621 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 JAKMIP1Q96N16 626 aaKnown RBP9.2□□□□□ -0.94
CHD8-209ENST00000555935 IL1RAPL2Q9NP60 686 aa9.2□□□□□ -0.94
CHD8-209ENST00000555935 UBTFL1P0CB47 393 aaPredicted RBP9.19□□□□□ -0.94
CHD8-209ENST00000555935 KCNJ4P48050 445 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 NUTM1Q86Y26 1132 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 CKAP2LQ8IYA6 745 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 LARP6Q9BRS8 491 aaKnown RBP9.19□□□□□ -0.94
CHD8-209ENST00000555935 TSPYL1Q9H0U9 437 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 ZNF215Q9UL58 517 aaPredicted RBP9.19□□□□□ -0.94
CHD8-209ENST00000555935 MON2Q7Z3U7 1717 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 CPS1P31327 1500 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 HTATSF1O43719 755 aaKnown RBP9.19□□□□□ -0.94
CHD8-209ENST00000555935 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
CHD8-209ENST00000555935 PDE4CQ08493 712 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 ST3GAL1Q11201 340 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 POLA2Q14181 598 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 RHPN1Q8TCX5 695 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 ZNF592Q92610 1267 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 SPATA32Q96LK8 384 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 DNAJC2Q99543 621 aaKnown RBP9.19□□□□□ -0.94
CHD8-209ENST00000555935 TTC41PQ6P2S7 1318 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 ITSN1Q15811 1721 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 CRYBG1Q9Y4K1 1723 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 MYO5BQ9ULV0 1848 aa9.19□□□□□ -0.94
CHD8-209ENST00000555935 GOLGA6L19H0YKK7 550 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 SLU7O95391 586 aaKnown RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 ZKSCAN1P17029 563 aaPredicted RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 ME3Q16798 604 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 CCDC144BQ3MJ40 725 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 HSP90AB4PQ58FF6 505 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 FBXO38Q6PIJ6 1188 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 CWC27Q6UX04 472 aaKnown RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 WAPLQ7Z5K2 1190 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 CCDC144CPQ8IYA2 1237 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 C3P01024 1663 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 XRN1Q8IZH2 1706 aaKnown RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 N4BP2Q86UW6 1770 aaPredicted RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 GIGYF1O75420 1035 aaPredicted RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 GLRX3O76003 335 aaKnown RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 BMS1Q14692 1282 aaKnown RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 ANKRD1Q15327 319 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 CDC37L1Q7L3B6 337 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 LEO1Q8WVC0 666 aaPredicted RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 USP44Q9H0E7 712 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 SPG7Q9UQ90 795 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 SPATA31D1Q6ZQQ2 1576 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 TULP2O00295 520 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 MAP4K4O95819 1239 aaPredicted RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 SKILP12757 684 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 CPA1P15085 419 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 PSMA5P28066 241 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 IPO4Q8TEX9 1081 aaKnown RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 DNAJC25Q9H1X3 360 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 SENP3Q9H4L4 574 aaPredicted RBP9.18□□□□□ -0.94
CHD8-209ENST00000555935 CHMP3Q9Y3E7 222 aa9.18□□□□□ -0.94
CHD8-209ENST00000555935 DIP2CQ9Y2E4 1556 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 CTAGE5O15320 804 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 TUBB4AP04350 444 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 ELF2Q15723 593 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 PRPF40BQ6NWY9 871 aaKnown RBP9.17□□□□□ -0.94
CHD8-209ENST00000555935 NUDT16Q96DE0 195 aaKnown RBP9.17□□□□□ -0.94
CHD8-209ENST00000555935 ALDH8A1Q9H2A2 487 aaPredicted RBP9.17□□□□□ -0.94
CHD8-209ENST00000555935 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms