RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ABCC4O15439 1325 aa13.99□□□□□ -0.17
TMEM260-208ENST00000555905 TXNRD1Q16881 649 aa13.99□□□□□ -0.17
TMEM260-208ENST00000555905 KSR2Q6VAB6 950 aa13.99□□□□□ -0.17
TMEM260-208ENST00000555905 KIF6Q6ZMV9 814 aa13.99□□□□□ -0.17
TMEM260-208ENST00000555905 LRP10Q7Z4F1 713 aa13.99□□□□□ -0.17
TMEM260-208ENST00000555905 TNNQ9UQP3 1299 aa13.99□□□□□ -0.17
TMEM260-208ENST00000555905 MYH14Q7Z406 1995 aaKnown RBP13.99□□□□□ -0.17
TMEM260-208ENST00000555905 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 PI4KAP2A4QPH2 592 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 RLBP1P12271 317 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 SLC4A10Q6U841 1118 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 ANKRD13DQ6ZTN6 518 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 RIC3Q7Z5B4 369 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 CCDC125Q86Z20 511 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 PI4KAP1Q8N8J0 262 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 LRRC4BQ9NT99 713 aa13.98□□□□□ -0.17
TMEM260-208ENST00000555905 F6X3S4 739 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 BAG6P46379 1132 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 CCT4P50991 539 aaKnown RBP13.97□□□□□ -0.17
TMEM260-208ENST00000555905 ITPRIPQ8IWB1 547 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 TMEM57Q8N5G2 664 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 DNAAF4Q8WXU2 420 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 AK7Q96M32 723 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 ARXQ96QS3 562 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 CRBNQ96SW2 442 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 MAP3K2Q9Y2U5 619 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 COG6Q9Y2V7 657 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 PXDNLA1KZ92 1463 aa13.97□□□□□ -0.17
TMEM260-208ENST00000555905 ADCY9O60503 1353 aa13.96□□□□□ -0.17
TMEM260-208ENST00000555905 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.17
TMEM260-208ENST00000555905 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.17
TMEM260-208ENST00000555905 A0A087WZG4 1122 aa13.96□□□□□ -0.17
TMEM260-208ENST00000555905 GNPATO15228 680 aa13.96□□□□□ -0.17
TMEM260-208ENST00000555905 EIF5P55010 431 aaKnown RBP13.96□□□□□ -0.17
TMEM260-208ENST00000555905 MVPQ14764 893 aaKnown RBP13.96□□□□□ -0.17
TMEM260-208ENST00000555905 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
TMEM260-208ENST00000555905 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
TMEM260-208ENST00000555905 TTLL7Q6ZT98 887 aa13.96□□□□□ -0.17
TMEM260-208ENST00000555905 RPS6KA4O75676 772 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 PROM2Q8N271 834 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 EXOC6Q8TAG9 804 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
TMEM260-208ENST00000555905 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
TMEM260-208ENST00000555905 GTF3C3Q9Y5Q9 886 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 NUP188Q5SRE5 1749 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 COL15A1P39059 1388 aa13.95□□□□□ -0.18
TMEM260-208ENST00000555905 EN1Q05925 392 aaPredicted RBP13.94□□□□□ -0.18
TMEM260-208ENST00000555905 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
TMEM260-208ENST00000555905 CAMKK2Q96RR4 588 aa13.94□□□□□ -0.18
TMEM260-208ENST00000555905 ZBTB3Q9H5J0 574 aa13.94□□□□□ -0.18
TMEM260-208ENST00000555905 ATP10DQ9P241 1426 aa13.94□□□□□ -0.18
TMEM260-208ENST00000555905 MAP3K15Q6ZN16 1313 aa13.93□□□□□ -0.18
TMEM260-208ENST00000555905 METTL22Q9BUU2 404 aaPredicted RBP13.93□□□□□ -0.18
TMEM260-208ENST00000555905 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
TMEM260-208ENST00000555905 TBC1D2BQ9UPU7 963 aa13.93□□□□□ -0.18
TMEM260-208ENST00000555905 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
TMEM260-208ENST00000555905 AAMPQ13685 434 aa13.92□□□□□ -0.18
TMEM260-208ENST00000555905 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
TMEM260-208ENST00000555905 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
TMEM260-208ENST00000555905 LINS1Q8NG48 757 aa13.92□□□□□ -0.18
TMEM260-208ENST00000555905 MYD88Q99836 296 aa13.92□□□□□ -0.18
TMEM260-208ENST00000555905 UBR3Q6ZT12 1888 aa13.92□□□□□ -0.18
TMEM260-208ENST00000555905 AFDNP55196 1824 aaKnown RBP13.92□□□□□ -0.18
TMEM260-208ENST00000555905 ALDH1L1O75891 902 aa13.91□□□□□ -0.18
TMEM260-208ENST00000555905 HSP90AB3PQ58FF7 597 aa13.91□□□□□ -0.18
TMEM260-208ENST00000555905 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
TMEM260-208ENST00000555905 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
TMEM260-208ENST00000555905 NUP98P52948 1817 aa13.91□□□□□ -0.18
TMEM260-208ENST00000555905 ZPR1O75312 459 aa13.9□□□□□ -0.18
TMEM260-208ENST00000555905 PHF14O94880 888 aa13.9□□□□□ -0.18
TMEM260-208ENST00000555905 SSFA2P28290 1259 aa13.9□□□□□ -0.18
TMEM260-208ENST00000555905 RFC4P35249 363 aa13.9□□□□□ -0.18
TMEM260-208ENST00000555905 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
TMEM260-208ENST00000555905 TFCP2L1Q9NZI6 479 aa13.9□□□□□ -0.18
TMEM260-208ENST00000555905 ANKRD36CQ5JPF3 1778 aa13.9□□□□□ -0.18
TMEM260-208ENST00000555905 BCORQ6W2J9 1755 aa13.9□□□□□ -0.18
TMEM260-208ENST00000555905 ZBTB7BO15156 539 aaPredicted RBP13.89□□□□□ -0.19
TMEM260-208ENST00000555905 RGL2O15211 777 aa13.89□□□□□ -0.19
TMEM260-208ENST00000555905 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
TMEM260-208ENST00000555905 GNAI3P08754 354 aa13.89□□□□□ -0.19
TMEM260-208ENST00000555905 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
TMEM260-208ENST00000555905 DEFB132Q7Z7B7 95 aa13.89□□□□□ -0.19
TMEM260-208ENST00000555905 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
TMEM260-208ENST00000555905 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
TMEM260-208ENST00000555905 C4AP0C0L4 1744 aa13.89□□□□□ -0.19
TMEM260-208ENST00000555905 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
TMEM260-208ENST00000555905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
TMEM260-208ENST00000555905 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 IGKV5-2P06315 115 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 HLFQ16534 295 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 ZNF827Q17R98 1081 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 CWF19L2Q2TBE0 894 aaKnown RBP13.88□□□□□ -0.19
TMEM260-208ENST00000555905 FLAD1Q8NFF5 587 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
TMEM260-208ENST00000555905 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms