RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.05□□□□□ -0.96
SLIRP-204ENST00000555890 PARP9Q8IXQ6 854 aa9.05□□□□□ -0.96
SLIRP-204ENST00000555890 SLC12A5Q9H2X9 1139 aa9.05□□□□□ -0.96
SLIRP-204ENST00000555890 C1orf115Q9H7X2 142 aa9.05□□□□□ -0.96
SLIRP-204ENST00000555890 PAPPAQ13219 1627 aa9.05□□□□□ -0.96
SLIRP-204ENST00000555890 BCL9O00512 1426 aa9.05□□□□□ -0.96
SLIRP-204ENST00000555890 PASKQ96RG2 1323 aa9.05□□□□□ -0.96
SLIRP-204ENST00000555890 INSRP06213 1382 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 ANKRD36BQ8N2N9 1353 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 DDB1Q16531 1140 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 CARD14Q9BXL6 1004 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 LRRC4BQ9NT99 713 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 TERF2IPQ9NYB0 399 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 VCANP13611 3396 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
SLIRP-204ENST00000555890 GRXCR2A6NFK2 248 aa9.03□□□□□ -0.96
SLIRP-204ENST00000555890 GLTPD2A6NH11 291 aa9.03□□□□□ -0.96
SLIRP-204ENST00000555890 GNPATO15228 680 aa9.03□□□□□ -0.96
SLIRP-204ENST00000555890 NEFLP07196 543 aa9.03□□□□□ -0.96
SLIRP-204ENST00000555890 GPR101Q96P66 508 aaPredicted RBP9.03□□□□□ -0.96
SLIRP-204ENST00000555890 CDK19Q9BWU1 502 aa9.03□□□□□ -0.96
SLIRP-204ENST00000555890 NSD3Q9BZ95 1437 aa9.03□□□□□ -0.96
SLIRP-204ENST00000555890 CGNL1Q0VF96 1302 aa9.03□□□□□ -0.96
SLIRP-204ENST00000555890 LRRC37A3O60309 1634 aa9.02□□□□□ -0.96
SLIRP-204ENST00000555890 CPDO75976 1380 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 NSD2O96028 1365 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 APBB1O00213 710 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 HIC1Q14526 733 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 HDGFL2Q7Z4V5 671 aaPredicted RBP9.02□□□□□ -0.97
SLIRP-204ENST00000555890 MORC1Q86VD1 984 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 PLPP6Q8IY26 295 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 MICALL2Q8IY33 904 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
SLIRP-204ENST00000555890 ZC3H4Q9UPT8 1303 aaKnown RBP9.02□□□□□ -0.97
SLIRP-204ENST00000555890 FCHSD2O94868 740 aa9.01□□□□□ -0.97
SLIRP-204ENST00000555890 ECE1P42892 770 aa9.01□□□□□ -0.97
SLIRP-204ENST00000555890 WDR43Q15061 677 aaKnown RBP eCLIP9.01□□□□□ -0.97
SLIRP-204ENST00000555890 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
SLIRP-204ENST00000555890 COL5A2P05997 1499 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-204ENST00000555890 ANKRD13DQ6ZTN6 518 aa9□□□□□ -0.97
SLIRP-204ENST00000555890 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
SLIRP-204ENST00000555890 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
SLIRP-204ENST00000555890 ANKRD26Q9UPS8 1709 aa9□□□□□ -0.97
SLIRP-204ENST00000555890 FAM205CA6NFA0 338 aa8.99□□□□□ -0.97
SLIRP-204ENST00000555890 WASLO00401 505 aaPredicted RBP8.99□□□□□ -0.97
SLIRP-204ENST00000555890 OSBPP22059 807 aa8.99□□□□□ -0.97
SLIRP-204ENST00000555890 MAP3K12Q12852 859 aa8.99□□□□□ -0.97
SLIRP-204ENST00000555890 NGDNQ8NEJ9 315 aaKnown RBP8.99□□□□□ -0.97
SLIRP-204ENST00000555890 CAPNS2Q96L46 248 aa8.99□□□□□ -0.97
SLIRP-204ENST00000555890 CRB1P82279 1406 aa8.98□□□□□ -0.97
SLIRP-204ENST00000555890 MAP2K2P36507 400 aa8.98□□□□□ -0.97
SLIRP-204ENST00000555890 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
SLIRP-204ENST00000555890 SLC27A3Q5K4L6 730 aa8.98□□□□□ -0.97
SLIRP-204ENST00000555890 COL23A1Q86Y22 540 aaPredicted RBP8.98□□□□□ -0.97
SLIRP-204ENST00000555890 CFAP53Q96M91 514 aa8.98□□□□□ -0.97
SLIRP-204ENST00000555890 P2RX7Q99572 595 aaKnown RBP8.98□□□□□ -0.97
SLIRP-204ENST00000555890 ABT1Q9ULW3 272 aaKnown RBP8.98□□□□□ -0.97
SLIRP-204ENST00000555890 STXBP5LQ9Y2K9 1186 aa8.98□□□□□ -0.97
SLIRP-204ENST00000555890 KIF20BQ96Q89 1820 aa8.98□□□□□ -0.97
SLIRP-204ENST00000555890 SMG6Q86US8 1419 aaKnown RBP8.97□□□□□ -0.97
SLIRP-204ENST00000555890 COL18A1P39060 1754 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 TMEM265A0A087WTH1 108 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 A6NJR5 290 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 POTECB2RU33 542 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 DPY19L2Q6NUT2 758 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 CABP1Q9NZU7 370 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 HPS5Q9UPZ3 1129 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 A0A1W2PP64 1363 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
SLIRP-204ENST00000555890 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
SLIRP-204ENST00000555890 GCP02774 474 aa8.96□□□□□ -0.98
SLIRP-204ENST00000555890 NUDT16Q96DE0 195 aaKnown RBP8.96□□□□□ -0.98
SLIRP-204ENST00000555890 PCMTD1Q96MG8 357 aaPredicted RBP8.96□□□□□ -0.98
SLIRP-204ENST00000555890 AXIN2Q9Y2T1 843 aa8.96□□□□□ -0.98
SLIRP-204ENST00000555890 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.98
SLIRP-204ENST00000555890 WNK3Q9BYP7 1800 aa8.96□□□□□ -0.98
SLIRP-204ENST00000555890 CASP8AP2Q9UKL3 1982 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 QSER1Q2KHR3 1735 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 AKAP12Q02952 1782 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 C2orf72A6NCS6 295 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 FECHP22830 423 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 GRM1Q13255 1194 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 ADAMTS8Q9UP79 889 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 NUDCQ9Y266 331 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
SLIRP-204ENST00000555890 TTC28Q96AY4 2481 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 PPIP5K1Q6PFW1 1433 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 CD163L1Q9NR16 1453 aa8.95□□□□□ -0.98
SLIRP-204ENST00000555890 TNNT2P45379 298 aaPredicted RBP8.94□□□□□ -0.98
SLIRP-204ENST00000555890 GIGYF2Q6Y7W6 1299 aaKnown RBP8.94□□□□□ -0.98
SLIRP-204ENST00000555890 NGEFQ8N5V2 710 aa8.94□□□□□ -0.98
SLIRP-204ENST00000555890 BAHCC1Q9P281 2608 aa8.94□□□□□ -0.98
SLIRP-204ENST00000555890 LTBP1Q14766 1721 aa8.94□□□□□ -0.98
SLIRP-204ENST00000555890 MON2Q7Z3U7 1717 aa8.94□□□□□ -0.98
SLIRP-204ENST00000555890 TUBGCP6Q96RT7 1819 aa8.94□□□□□ -0.98
SLIRP-204ENST00000555890 FYB1O15117 783 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms