RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SETD1AO15047 1707 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 CTIFO43310 598 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 TPM3P06753 285 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 PAX3P23760 479 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 RAD51AP2Q09MP3 1159 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 MAP9Q49MG5 647 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 ATF7IPQ6VMQ6 1270 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 NUCKS1Q9H1E3 243 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 ARHGEF28Q8N1W1 1705 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 TPD52L2O43399 206 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 FAM163BP0C2L3 166 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 SART3Q15020 963 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 CTNNA3Q9UI47 895 aa12.29□□□□□ -0.44
EFCAB11-208ENST00000555872 ERBB3P21860 1342 aa12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 NCBP1Q09161 790 aaKnown RBP12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 DRC1Q96MC2 740 aa12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 NOB1Q9ULX3 412 aaKnown RBP12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 CALRP27797 417 aaKnown RBP12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 CREBRFQ8IUR6 639 aa12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 MAF1Q9H063 256 aa12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 ANAPC4Q9UJX5 808 aa12.28□□□□□ -0.44
EFCAB11-208ENST00000555872 KIF3CO14782 793 aa12.27□□□□□ -0.44
EFCAB11-208ENST00000555872 TERF2Q15554 542 aa12.27□□□□□ -0.44
EFCAB11-208ENST00000555872 RPAINQ86UA6 219 aa12.27□□□□□ -0.44
EFCAB11-208ENST00000555872 RIMS2Q9UQ26 1411 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 QRICH2Q9H0J4 1663 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 ALKQ9UM73 1620 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 H0YHG0 523 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 CDC45O75419 566 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 ECEL1O95672 775 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 SKILP12757 684 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 TSGA10IPQ3SY00 556 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 KIAA1524Q8TCG1 905 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 PYCARDQ9ULZ3 195 aa12.27□□□□□ -0.45
EFCAB11-208ENST00000555872 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 EXOSC9Q06265 439 aaKnown RBP12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 DDX41Q9UJV9 622 aaKnown RBP12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 ZNF280DQ6N043 979 aa12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 PRPF38AQ8NAV1 312 aaKnown RBP12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 FAM184AQ8NB25 1140 aa12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 MTA3Q9BTC8 594 aa12.26□□□□□ -0.45
EFCAB11-208ENST00000555872 NRXN3Q9Y4C0 1643 aa12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 IRAK4Q9NWZ3 460 aa12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 ST18O60284 1047 aa12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 CAPN15O75808 1086 aa12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 GSCP56915 257 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 NAA30Q147X3 362 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 SLIT1O75093 1534 aa12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-208ENST00000555872 LIG1P18858 919 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 GDPD2Q9HCC8 539 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 ZNF232Q9UNY5 417 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 TESPA1A2RU30 521 aaPredicted RBP12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 RBM26Q5T8P6 1007 aaKnown RBP12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 KNDC1Q76NI1 1749 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 NAT1P18440 290 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 HNRNPH2P55795 449 aaKnown RBP12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 SUDS3Q9H7L9 328 aaPredicted RBP12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 JRKLQ9Y4A0 524 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 NUB1Q9Y5A7 615 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 PAXBP1Q9Y5B6 917 aa12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
EFCAB11-208ENST00000555872 GADD45BO75293 160 aaPredicted RBP12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 ABCD1P33897 745 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 TMEM2Q9UHN6 1383 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 MYOM1P52179 1685 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 ARHGAP23Q9P227 1491 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 CASQ1P31415 396 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 SPC24Q8NBT2 197 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 USP26Q9BXU7 913 aa12.23□□□□□ -0.45
EFCAB11-208ENST00000555872 ANKRD33BA6NCL7 494 aa12.22□□□□□ -0.45
EFCAB11-208ENST00000555872 KIF18AQ8NI77 898 aa12.22□□□□□ -0.45
EFCAB11-208ENST00000555872 GSPT1P15170 499 aaKnown RBP12.22□□□□□ -0.45
EFCAB11-208ENST00000555872 ZSCAN26Q16670 478 aa12.22□□□□□ -0.45
EFCAB11-208ENST00000555872 TTC19Q6DKK2 380 aaPredicted RBP12.22□□□□□ -0.45
EFCAB11-208ENST00000555872 RAD50Q92878 1312 aa12.21□□□□□ -0.45
EFCAB11-208ENST00000555872 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
EFCAB11-208ENST00000555872 CCDC91Q7Z6B0 441 aa12.21□□□□□ -0.45
EFCAB11-208ENST00000555872 KRT222Q8N1A0 295 aa12.21□□□□□ -0.45
EFCAB11-208ENST00000555872 GCC1Q96CN9 775 aa12.21□□□□□ -0.45
EFCAB11-208ENST00000555872 SMARCA5O60264 1052 aaPredicted RBP12.21□□□□□ -0.46
EFCAB11-208ENST00000555872 HDGFL1Q5TGJ6 251 aa12.21□□□□□ -0.46
EFCAB11-208ENST00000555872 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.46
EFCAB11-208ENST00000555872 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
EFCAB11-208ENST00000555872 CEP170BQ9Y4F5 1589 aaPredicted RBP12.2□□□□□ -0.46
EFCAB11-208ENST00000555872 C16orf45Q96MC5 204 aaPredicted RBP12.2□□□□□ -0.46
EFCAB11-208ENST00000555872 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms