RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 KLK14Q9P0G3 267 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 WWC3Q9ULE0 1092 aa4.69□□□□□ -1.66
MTHFD1-212ENST00000555858 RPLP1P05386 114 aaKnown RBP4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 SF3A1Q15459 793 aaKnown RBP4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 SPRYD7Q5W111 196 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 TMEM214Q6NUQ4 689 aaKnown RBP4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 POTEGQ6S5H5 508 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 RHBDD1Q8TEB9 315 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 FBF1Q8TES7 1133 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 ITPKCQ96DU7 683 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 AGBL1Q96MI9 1066 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 KLF16Q9BXK1 252 aaPredicted RBP4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 METTL5Q9NRN9 209 aaKnown RBP4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 FAM13BQ9NYF5 915 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 VTI1BQ9UEU0 232 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 PARP3Q9Y6F1 533 aa4.68□□□□□ -1.66
MTHFD1-212ENST00000555858 ZIC2O95409 532 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 NEFLP07196 543 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 GNA15P30679 374 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 GPC1P35052 558 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 WDR4P57081 412 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 HIF1AQ16665 826 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 GNASQ5JWF2 1037 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 TREML1Q86YW5 311 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 TTC16Q8NEE8 873 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 SNIP1Q8TAD8 396 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 FRMD6Q96NE9 622 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 CSRNP1Q96S65 589 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 SETDB2Q96T68 719 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 RNF19AQ9NV58 838 aa4.67□□□□□ -1.66
MTHFD1-212ENST00000555858 EIF1AYO14602 144 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 FANCCQ00597 558 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 RELBQ01201 579 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 ZNF697Q5TEC3 545 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 C9orf131Q5VYM1 1079 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 ZNF598Q86UK7 904 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 METTL16Q86W50 562 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 NT5DC4Q86YG4 428 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 GPR152Q8TDT2 470 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 PIK3R5Q8WYR1 880 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 UBXN4Q92575 508 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 RNF34Q969K3 372 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 NUDT16Q96DE0 195 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 GRIP2Q9C0E4 1043 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 DNAJC25Q9H1X3 360 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 ZNF395Q9H8N7 513 aaPredicted RBP4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 ZFAND3Q9H8U3 227 aa4.66□□□□□ -1.66
MTHFD1-212ENST00000555858 TGFBR3LH3BV60 316 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 MICAL2O94851 1124 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 TIMP2P16035 220 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 ZNF76P36508 570 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 TXLNAP40222 546 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 PLA2G4AP47712 749 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 RAD51AP2Q09MP3 1159 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 ORC1Q13415 861 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 NBPF1Q3BBV0 1214 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 C8orf34Q49A92 452 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 SLC27A3Q5K4L6 730 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 IFFO2Q5TF58 517 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 RHPN1Q8TCX5 695 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 CFHR5Q9BXR6 569 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 TGIF2Q9GZN2 237 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 ZDHHC3Q9NYG2 299 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 PKD2L1Q9P0L9 805 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 SPG7Q9UQ90 795 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 BCS1LQ9Y276 419 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 GPC6Q9Y625 555 aaPredicted RBP4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 AK5Q9Y6K8 562 aa4.65□□□□□ -1.67
MTHFD1-212ENST00000555858 TTC24A2A3L6 582 aaPredicted RBP4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 RNF144AP50876 292 aaPredicted RBP4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 FOXC1Q12948 553 aa4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 C4orf17Q53FE4 359 aa4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 IER5Q5VY09 327 aa4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 MEIOBQ8N635 442 aa4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 CRELD1Q96HD1 420 aa4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 GGNBP2Q9H3C7 697 aa4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 CCSER2Q9H7U1 834 aa4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 PPP1R1BQ9UD71 204 aaPredicted RBP4.64□□□□□ -1.67
MTHFD1-212ENST00000555858 J3QL48 77 aa4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 CPNE3O75131 537 aaKnown RBP4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 TATP17735 454 aaPredicted RBP4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 EIF4BP23588 611 aaKnown RBP4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 NBPF10Q6P3W6 841 aaKnown RBP4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 CYP4X1Q8N118 509 aa4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 C7orf43Q8WVR3 580 aa4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 SUSD3Q96L08 255 aa4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 TSEN34Q9BSV6 310 aaKnown RBP4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 ANKIB1Q9P2G1 1089 aa4.63□□□□□ -1.67
MTHFD1-212ENST00000555858 A6NHS1 94 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 SPATA31C2B4DYI2 1134 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 OPLAHO14841 1288 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 GIPC1O14908 333 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 SPINT1O43278 529 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 IDH3AP50213 366 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 ARSDP51689 593 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 XKR5Q6UX68 686 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 SLC43A3Q8NBI5 491 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 AIDAQ96BJ3 306 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 TINF2Q9BSI4 451 aa4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 DMGDHQ9UI17 866 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms