RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 KIF6Q6ZMV9 814 aa20.26■□□□□ 0.83
SNX6-205ENST00000555648 NMRK2Q9NPI5 230 aa20.26■□□□□ 0.83
SNX6-205ENST00000555648 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
SNX6-205ENST00000555648 TOMM70O94826 608 aa20.25■□□□□ 0.83
SNX6-205ENST00000555648 HSPA6P17066 643 aa20.25■□□□□ 0.83
SNX6-205ENST00000555648 MASTLQ96GX5 879 aa20.25■□□□□ 0.83
SNX6-205ENST00000555648 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
SNX6-205ENST00000555648 NRXN2Q9P2S2 1712 aa20.24■□□□□ 0.83
SNX6-205ENST00000555648 C21orf2O43822 256 aa20.24■□□□□ 0.83
SNX6-205ENST00000555648 MYL6BP14649 208 aa20.24■□□□□ 0.83
SNX6-205ENST00000555648 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
SNX6-205ENST00000555648 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
SNX6-205ENST00000555648 STYK1Q6J9G0 422 aa20.24■□□□□ 0.83
SNX6-205ENST00000555648 BRCA1P38398 1863 aaKnown RBP20.23■□□□□ 0.83
SNX6-205ENST00000555648 CCDC146Q8IYE0 955 aa20.23■□□□□ 0.83
SNX6-205ENST00000555648 ZC3H4Q9UPT8 1303 aaKnown RBP20.23■□□□□ 0.83
SNX6-205ENST00000555648 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
SNX6-205ENST00000555648 ARFGEF1Q9Y6D6 1849 aa20.23■□□□□ 0.83
SNX6-205ENST00000555648 SRGNP10124 158 aa20.22■□□□□ 0.83
SNX6-205ENST00000555648 SOGA3Q5TF21 947 aa20.22■□□□□ 0.83
SNX6-205ENST00000555648 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
SNX6-205ENST00000555648 ERVV-1B6SEH8 477 aa20.21■□□□□ 0.83
SNX6-205ENST00000555648 EIF2S2P20042 333 aaKnown RBP20.21■□□□□ 0.83
SNX6-205ENST00000555648 HLFQ16534 295 aa20.21■□□□□ 0.83
SNX6-205ENST00000555648 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
SNX6-205ENST00000555648 NYXQ9GZU5 481 aa20.21■□□□□ 0.83
SNX6-205ENST00000555648 ERBB4Q15303 1308 aa20.21■□□□□ 0.83
SNX6-205ENST00000555648 NPR1P16066 1061 aa20.2■□□□□ 0.82
SNX6-205ENST00000555648 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
SNX6-205ENST00000555648 RRAGCQ9HB90 399 aa20.2■□□□□ 0.82
SNX6-205ENST00000555648 MAP3K15Q6ZN16 1313 aa20.2■□□□□ 0.82
SNX6-205ENST00000555648 NFKBIEO00221 500 aa20.19■□□□□ 0.82
SNX6-205ENST00000555648 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
SNX6-205ENST00000555648 TAOK3Q9H2K8 898 aa20.19■□□□□ 0.82
SNX6-205ENST00000555648 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
SNX6-205ENST00000555648 RBM46Q8TBY0 533 aaKnown RBP20.18■□□□□ 0.82
SNX6-205ENST00000555648 ZBTB3Q9H5J0 574 aa20.18■□□□□ 0.82
SNX6-205ENST00000555648 ERFEQ4G0M1 354 aa20.17■□□□□ 0.82
SNX6-205ENST00000555648 TTLL7Q6ZT98 887 aa20.17■□□□□ 0.82
SNX6-205ENST00000555648 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
SNX6-205ENST00000555648 GLTPD2A6NH11 291 aa20.16■□□□□ 0.82
SNX6-205ENST00000555648 GPTP24298 496 aa20.16■□□□□ 0.82
SNX6-205ENST00000555648 APLP1P51693 650 aa20.16■□□□□ 0.82
SNX6-205ENST00000555648 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
SNX6-205ENST00000555648 ALDH1B1P30837 517 aa20.15■□□□□ 0.82
SNX6-205ENST00000555648 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
SNX6-205ENST00000555648 BCORQ6W2J9 1755 aa20.14■□□□□ 0.81
SNX6-205ENST00000555648 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
SNX6-205ENST00000555648 PRELPP51888 382 aa20.14■□□□□ 0.81
SNX6-205ENST00000555648 NUTM1Q86Y26 1132 aa20.14■□□□□ 0.81
SNX6-205ENST00000555648 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
SNX6-205ENST00000555648 KLRG2A4D1S0 409 aaPredicted RBP20.13■□□□□ 0.81
SNX6-205ENST00000555648 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
SNX6-205ENST00000555648 FSTL1Q12841 308 aa20.13■□□□□ 0.81
SNX6-205ENST00000555648 GIGYF2Q6Y7W6 1299 aaKnown RBP20.13■□□□□ 0.81
SNX6-205ENST00000555648 PPP1R42Q7Z4L9 355 aa20.13■□□□□ 0.81
SNX6-205ENST00000555648 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
SNX6-205ENST00000555648 RPGRQ92834 1020 aaKnown RBP20.13■□□□□ 0.81
SNX6-205ENST00000555648 DLG5Q8TDM6 1919 aa20.12■□□□□ 0.81
SNX6-205ENST00000555648 KDM3BQ7LBC6 1761 aa20.12■□□□□ 0.81
SNX6-205ENST00000555648 DLEC1Q9Y238 1755 aa20.12■□□□□ 0.81
SNX6-205ENST00000555648 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
SNX6-205ENST00000555648 CHL1O00533 1208 aa20.11■□□□□ 0.81
SNX6-205ENST00000555648 AIMP1Q12904 312 aaKnown RBP20.11■□□□□ 0.81
SNX6-205ENST00000555648 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
SNX6-205ENST00000555648 RTKN2Q8IZC4 609 aa20.11■□□□□ 0.81
SNX6-205ENST00000555648 SMC1BQ8NDV3 1235 aa20.11■□□□□ 0.81
SNX6-205ENST00000555648 ANKRD31Q8N7Z5 1873 aa20.1■□□□□ 0.81
SNX6-205ENST00000555648 ANXA1P04083 346 aa20.1■□□□□ 0.81
SNX6-205ENST00000555648 SUSD4Q5VX71 490 aa20.1■□□□□ 0.81
SNX6-205ENST00000555648 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
SNX6-205ENST00000555648 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
SNX6-205ENST00000555648 ZNF34Q8IZ26 560 aa20.09■□□□□ 0.81
SNX6-205ENST00000555648 TMX4Q9H1E5 349 aaPredicted RBP20.09■□□□□ 0.81
SNX6-205ENST00000555648 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.81
SNX6-205ENST00000555648 UBN2Q6ZU65 1347 aa20.08■□□□□ 0.81
SNX6-205ENST00000555648 FKBP4Q02790 459 aaKnown RBP eCLIP20.08■□□□□ 0.81
SNX6-205ENST00000555648 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
SNX6-205ENST00000555648 PDIA6Q15084 440 aa20.08■□□□□ 0.81
SNX6-205ENST00000555648 PROSER3Q2NL68 480 aa20.08■□□□□ 0.81
SNX6-205ENST00000555648 COPS6Q7L5N1 327 aa20.08■□□□□ 0.81
SNX6-205ENST00000555648 XAGE3Q8WTP9 111 aa20.08■□□□□ 0.81
SNX6-205ENST00000555648 C7orf43Q8WVR3 580 aa20.08■□□□□ 0.81
SNX6-205ENST00000555648 RBM17Q96I25 401 aaKnown RBP20.08■□□□□ 0.81
SNX6-205ENST00000555648 UTP14AQ9BVJ6 771 aaKnown RBP20.08■□□□□ 0.81
SNX6-205ENST00000555648 ABCC12Q96J65 1359 aa20.08■□□□□ 0.8
SNX6-205ENST00000555648 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
SNX6-205ENST00000555648 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
SNX6-205ENST00000555648 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
SNX6-205ENST00000555648 COL11A2P13942 1736 aaPredicted RBP20.07■□□□□ 0.8
SNX6-205ENST00000555648 APAF1O14727 1248 aa20.06■□□□□ 0.8
SNX6-205ENST00000555648 HOXB7P09629 217 aa20.06■□□□□ 0.8
SNX6-205ENST00000555648 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
SNX6-205ENST00000555648 CRY2Q49AN0 593 aa20.06■□□□□ 0.8
SNX6-205ENST00000555648 CC2D2BQ6DHV5 1058 aa20.06■□□□□ 0.8
SNX6-205ENST00000555648 CFAP44Q96MT7 982 aa20.06■□□□□ 0.8
SNX6-205ENST00000555648 ZNF277Q9NRM2 450 aaPredicted RBP20.06■□□□□ 0.8
SNX6-205ENST00000555648 NTSR2O95665 410 aa20.05■□□□□ 0.8
SNX6-205ENST00000555648 LRP10Q7Z4F1 713 aa20.04■□□□□ 0.8
SNX6-205ENST00000555648 SYNE4Q8N205 404 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms