RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
PRKCH-218ENST00000555628 RRAGCQ9HB90 399 aa12.75□□□□□ -0.37
PRKCH-218ENST00000555628 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
PRKCH-218ENST00000555628 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
PRKCH-218ENST00000555628 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
PRKCH-218ENST00000555628 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
PRKCH-218ENST00000555628 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
PRKCH-218ENST00000555628 HSPA1AP0DMV8 641 aaKnown RBP12.74□□□□□ -0.37
PRKCH-218ENST00000555628 HSPA1BP0DMV9 641 aaKnown RBP12.74□□□□□ -0.37
PRKCH-218ENST00000555628 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
PRKCH-218ENST00000555628 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
PRKCH-218ENST00000555628 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
PRKCH-218ENST00000555628 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
PRKCH-218ENST00000555628 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
PRKCH-218ENST00000555628 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
PRKCH-218ENST00000555628 PARP3Q9Y6F1 533 aa12.73□□□□□ -0.37
PRKCH-218ENST00000555628 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
PRKCH-218ENST00000555628 CHRNA5P30532 468 aa12.72□□□□□ -0.37
PRKCH-218ENST00000555628 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
PRKCH-218ENST00000555628 POTECB2RU33 542 aa12.71□□□□□ -0.37
PRKCH-218ENST00000555628 TM4SF1P30408 202 aa12.71□□□□□ -0.37
PRKCH-218ENST00000555628 RFC4P35249 363 aa12.71□□□□□ -0.37
PRKCH-218ENST00000555628 RASSF7Q02833 373 aa12.71□□□□□ -0.37
PRKCH-218ENST00000555628 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
PRKCH-218ENST00000555628 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
PRKCH-218ENST00000555628 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
PRKCH-218ENST00000555628 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
PRKCH-218ENST00000555628 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
PRKCH-218ENST00000555628 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
PRKCH-218ENST00000555628 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
PRKCH-218ENST00000555628 MRC1P22897 1456 aa12.68□□□□□ -0.38
PRKCH-218ENST00000555628 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
PRKCH-218ENST00000555628 NFKBIEO00221 500 aa12.68□□□□□ -0.38
PRKCH-218ENST00000555628 SLC34A2O95436 690 aa12.68□□□□□ -0.38
PRKCH-218ENST00000555628 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
PRKCH-218ENST00000555628 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
PRKCH-218ENST00000555628 VEGFAP15692 232 aaPredicted RBP12.67□□□□□ -0.38
PRKCH-218ENST00000555628 CARMIL3Q8ND23 1372 aa12.67□□□□□ -0.38
PRKCH-218ENST00000555628 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-218ENST00000555628 ST18O60284 1047 aa12.66□□□□□ -0.38
PRKCH-218ENST00000555628 LMNB1P20700 586 aa12.66□□□□□ -0.38
PRKCH-218ENST00000555628 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
PRKCH-218ENST00000555628 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.38
PRKCH-218ENST00000555628 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
PRKCH-218ENST00000555628 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
PRKCH-218ENST00000555628 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
PRKCH-218ENST00000555628 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
PRKCH-218ENST00000555628 HOXB3P14651 431 aaPredicted RBP12.64□□□□□ -0.39
PRKCH-218ENST00000555628 NFIXQ14938 502 aa12.64□□□□□ -0.39
PRKCH-218ENST00000555628 VIRMAQ69YN4 1812 aaKnown RBP12.64□□□□□ -0.39
PRKCH-218ENST00000555628 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
PRKCH-218ENST00000555628 ADAMTSL1Q8N6G6 1762 aa12.63□□□□□ -0.39
PRKCH-218ENST00000555628 CNTNAP1P78357 1384 aa12.62□□□□□ -0.39
PRKCH-218ENST00000555628 C2orf72A6NCS6 295 aa12.62□□□□□ -0.39
PRKCH-218ENST00000555628 CABP4P57796 275 aa12.62□□□□□ -0.39
PRKCH-218ENST00000555628 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
PRKCH-218ENST00000555628 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-218ENST00000555628 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 COL15A1P39059 1388 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 SNPHO15079 494 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 FOXN1O15353 648 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 AEBP1Q8IUX7 1158 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
PRKCH-218ENST00000555628 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-218ENST00000555628 AMOTQ4VCS5 1084 aa12.6□□□□□ -0.39
PRKCH-218ENST00000555628 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-218ENST00000555628 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
PRKCH-218ENST00000555628 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
PRKCH-218ENST00000555628 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
PRKCH-218ENST00000555628 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
PRKCH-218ENST00000555628 TTLL6Q8N841 843 aa12.59□□□□□ -0.39
PRKCH-218ENST00000555628 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
PRKCH-218ENST00000555628 LTBP3Q9NS15 1303 aa12.59□□□□□ -0.39
PRKCH-218ENST00000555628 MTHFSP49914 203 aa12.58□□□□□ -0.4
PRKCH-218ENST00000555628 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.4
PRKCH-218ENST00000555628 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
PRKCH-218ENST00000555628 SCN4AP35499 1836 aa12.58□□□□□ -0.4
PRKCH-218ENST00000555628 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
PRKCH-218ENST00000555628 POTEMA6NI47 508 aa12.57□□□□□ -0.4
PRKCH-218ENST00000555628 SERPINB2P05120 415 aa12.57□□□□□ -0.4
PRKCH-218ENST00000555628 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
PRKCH-218ENST00000555628 C2CD5Q86YS7 1000 aa12.57□□□□□ -0.4
PRKCH-218ENST00000555628 TNRC18O15417 2968 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-218ENST00000555628 ZPR1O75312 459 aa12.56□□□□□ -0.4
PRKCH-218ENST00000555628 TNNT2P45379 298 aaPredicted RBP12.55□□□□□ -0.4
PRKCH-218ENST00000555628 SLC52A2Q9HAB3 445 aa12.55□□□□□ -0.4
PRKCH-218ENST00000555628 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
PRKCH-218ENST00000555628 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
PRKCH-218ENST00000555628 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-218ENST00000555628 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-218ENST00000555628 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
PRKCH-218ENST00000555628 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
PRKCH-218ENST00000555628 WBP1LQ9NX94 342 aa12.54□□□□□ -0.4
PRKCH-218ENST00000555628 H0YIN7 160 aa12.53□□□□□ -0.4
PRKCH-218ENST00000555628 IL13P35225 146 aa12.53□□□□□ -0.4
PRKCH-218ENST00000555628 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-218ENST00000555628 VEGFBP49765 207 aa12.53□□□□□ -0.4
PRKCH-218ENST00000555628 EIF5P55010 431 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms