RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 PARP10Q53GL7 1025 aa8.44□□□□□ -1.06
PRKCH-217ENST00000555604 PDGFDQ9GZP0 370 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-217ENST00000555604 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
PRKCH-217ENST00000555604 RNF123Q5XPI4 1314 aa8.44□□□□□ -1.06
PRKCH-217ENST00000555604 MYH14Q7Z406 1995 aaKnown RBP8.43□□□□□ -1.06
PRKCH-217ENST00000555604 MMP10P09238 476 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 HSP90B1P14625 803 aaKnown RBP8.43□□□□□ -1.06
PRKCH-217ENST00000555604 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
PRKCH-217ENST00000555604 FKBP8Q14318 412 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 PROSER3Q2NL68 480 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 KSR2Q6VAB6 950 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 TPTE2Q6XPS3 522 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 XAGE3Q8WTP9 111 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 NECTIN2Q92692 538 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 NYXQ9GZU5 481 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-217ENST00000555604 SRP68Q9UHB9 627 aaKnown RBP8.43□□□□□ -1.06
PRKCH-217ENST00000555604 ATF5Q9Y2D1 282 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-217ENST00000555604 CD2APQ9Y5K6 639 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 PTPRCP08575 1304 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 CARMIL3Q8ND23 1372 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 IBTKQ9P2D0 1353 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-217ENST00000555604 ATP10DQ9P241 1426 aa8.43□□□□□ -1.06
PRKCH-217ENST00000555604 IPO8O15397 1037 aaKnown RBP8.42□□□□□ -1.06
PRKCH-217ENST00000555604 PIP4K2AP48426 406 aaPredicted RBP8.42□□□□□ -1.06
PRKCH-217ENST00000555604 NEXNQ0ZGT2 675 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 AIMP1Q12904 312 aaKnown RBP8.42□□□□□ -1.06
PRKCH-217ENST00000555604 FLIIQ13045 1269 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 TCIRG1Q13488 830 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 NFIXQ14938 502 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 TTLL7Q6ZT98 887 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 PPP1R42Q7Z4L9 355 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 ZNF34Q8IZ26 560 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 ARHGAP45Q92619 1136 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 LRP5O75197 1615 aa8.42□□□□□ -1.06
PRKCH-217ENST00000555604 COL24A1Q17RW2 1714 aa8.41□□□□□ -1.06
PRKCH-217ENST00000555604 KIF16BQ96L93 1317 aa8.41□□□□□ -1.06
PRKCH-217ENST00000555604 POLRMTO00411 1230 aaKnown RBP8.41□□□□□ -1.06
PRKCH-217ENST00000555604 SERPINB2P05120 415 aa8.41□□□□□ -1.06
PRKCH-217ENST00000555604 TGFB2P61812 414 aa8.41□□□□□ -1.06
PRKCH-217ENST00000555604 FKBP5Q13451 457 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-217ENST00000555604 TBC1D9BQ66K14 1250 aa8.41□□□□□ -1.06
PRKCH-217ENST00000555604 SMIM5Q71RC9 77 aa8.41□□□□□ -1.06
PRKCH-217ENST00000555604 METTL22Q9BUU2 404 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-217ENST00000555604 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
PRKCH-217ENST00000555604 NIP7Q9Y221 180 aaKnown RBP eCLIP8.41□□□□□ -1.06
PRKCH-217ENST00000555604 TUBGCP6Q96RT7 1819 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 PI4KAP2A4QPH2 592 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 NPHP1O15259 732 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 ANXA1P04083 346 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 RARSP54136 660 aaKnown RBP8.4□□□□□ -1.06
PRKCH-217ENST00000555604 ST5P78524 1137 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 HLFQ16534 295 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 MSL1Q68DK7 614 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 NBPF5PQ86XG9 351 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-217ENST00000555604 MRPL50Q8N5N7 158 aaKnown RBP8.4□□□□□ -1.06
PRKCH-217ENST00000555604 PI4KAP1Q8N8J0 262 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 CNBD1Q8NA66 436 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 CCDC191Q8NCU4 936 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 SSH1Q8WYL5 1049 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 ISCA1Q9BUE6 129 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 BRIP1Q9BX63 1249 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 PHAXQ9H814 394 aaKnown RBP8.4□□□□□ -1.06
PRKCH-217ENST00000555604 SMC4Q9NTJ3 1288 aa8.4□□□□□ -1.06
PRKCH-217ENST00000555604 C4AP0C0L4 1744 aa8.4□□□□□ -1.07
PRKCH-217ENST00000555604 SCN7AQ01118 1682 aa8.4□□□□□ -1.07
PRKCH-217ENST00000555604 GTF2E1P29083 439 aaPredicted RBP8.39□□□□□ -1.07
PRKCH-217ENST00000555604 PDE6BP35913 854 aa8.39□□□□□ -1.07
PRKCH-217ENST00000555604 DDR1Q08345 913 aa8.39□□□□□ -1.07
PRKCH-217ENST00000555604 LINS1Q8NG48 757 aa8.39□□□□□ -1.07
PRKCH-217ENST00000555604 DNAAF4Q8WXU2 420 aa8.39□□□□□ -1.07
PRKCH-217ENST00000555604 UTP14AQ9BVJ6 771 aaKnown RBP8.39□□□□□ -1.07
PRKCH-217ENST00000555604 API5Q9BZZ5 524 aaKnown RBP8.39□□□□□ -1.07
PRKCH-217ENST00000555604 HDAC5Q9UQL6 1122 aa8.39□□□□□ -1.07
PRKCH-217ENST00000555604 MAP3K2Q9Y2U5 619 aa8.39□□□□□ -1.07
PRKCH-217ENST00000555604 ALDH1L1O75891 902 aa8.38□□□□□ -1.07
PRKCH-217ENST00000555604 MS4A1P11836 297 aa8.38□□□□□ -1.07
PRKCH-217ENST00000555604 SLC10A5Q5PT55 438 aa8.38□□□□□ -1.07
PRKCH-217ENST00000555604 BICDL1Q6ZP65 573 aa8.38□□□□□ -1.07
PRKCH-217ENST00000555604 NLRP10Q86W26 655 aa8.38□□□□□ -1.07
PRKCH-217ENST00000555604 ZBTB38Q8NAP3 1195 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-217ENST00000555604 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-217ENST00000555604 CACNA1FO60840 1977 aa8.38□□□□□ -1.07
PRKCH-217ENST00000555604 BCORQ6W2J9 1755 aa8.38□□□□□ -1.07
PRKCH-217ENST00000555604 RIC1Q4ADV7 1423 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 ADCY9O60503 1353 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 SH3TC1Q8TE82 1336 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 KLRG2A4D1S0 409 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-217ENST00000555604 CCT4P50991 539 aaKnown RBP8.37□□□□□ -1.07
PRKCH-217ENST00000555604 SUSD4Q5VX71 490 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 PRR5LQ6MZQ0 368 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 G2E3Q7L622 706 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 SYT17Q9BSW7 474 aa8.37□□□□□ -1.07
PRKCH-217ENST00000555604 FHDC1Q9C0D6 1143 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-217ENST00000555604 TRMT112Q9UI30 125 aaKnown RBP8.37□□□□□ -1.07
PRKCH-217ENST00000555604 UBN2Q6ZU65 1347 aa8.36□□□□□ -1.07
PRKCH-217ENST00000555604 DCAF8L1A6NGE4 600 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms