RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 PROCP04070 461 aa9.49□□□□□ -0.89
LINC00643-203ENST00000555518 FAM50AQ14320 339 aaKnown RBP9.49□□□□□ -0.89
LINC00643-203ENST00000555518 EFHC2Q5JST6 749 aa9.49□□□□□ -0.89
LINC00643-203ENST00000555518 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
LINC00643-203ENST00000555518 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
LINC00643-203ENST00000555518 XAGE2Q96GT9 111 aa9.48□□□□□ -0.89
LINC00643-203ENST00000555518 ATXN7L1Q9ULK2 861 aaPredicted RBP9.48□□□□□ -0.89
LINC00643-203ENST00000555518 ABCC5O15440 1437 aa9.48□□□□□ -0.89
LINC00643-203ENST00000555518 MBD5Q9P267 1494 aa9.47□□□□□ -0.89
LINC00643-203ENST00000555518 IL2RAP01589 272 aa9.47□□□□□ -0.89
LINC00643-203ENST00000555518 RAB6BQ9NRW1 208 aa9.47□□□□□ -0.89
LINC00643-203ENST00000555518 CFDP1Q9UEE9 299 aaPredicted RBP9.47□□□□□ -0.89
LINC00643-203ENST00000555518 HRH3Q9Y5N1 445 aa9.47□□□□□ -0.89
LINC00643-203ENST00000555518 DAPK1P53355 1430 aa9.47□□□□□ -0.89
LINC00643-203ENST00000555518 CROCC2H7BZ55 1655 aa9.46□□□□□ -0.89
LINC00643-203ENST00000555518 ITGB2P05107 769 aa9.46□□□□□ -0.9
LINC00643-203ENST00000555518 GPAMQ9HCL2 828 aa9.46□□□□□ -0.9
LINC00643-203ENST00000555518 ARHGAP5Q13017 1502 aa9.46□□□□□ -0.9
LINC00643-203ENST00000555518 ARHGEF12Q9NZN5 1544 aa9.46□□□□□ -0.9
LINC00643-203ENST00000555518 GLI2P10070 1586 aa9.46□□□□□ -0.9
LINC00643-203ENST00000555518 ARHGEF5Q12774 1597 aa9.46□□□□□ -0.9
LINC00643-203ENST00000555518 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
LINC00643-203ENST00000555518 EDARADDQ8WWZ3 215 aa9.45□□□□□ -0.9
LINC00643-203ENST00000555518 SIRT1Q96EB6 747 aa9.45□□□□□ -0.9
LINC00643-203ENST00000555518 CEP126Q9P2H0 1117 aa9.45□□□□□ -0.9
LINC00643-203ENST00000555518 HFM1A2PYH4 1435 aa9.45□□□□□ -0.9
LINC00643-203ENST00000555518 AKNAQ7Z591 1439 aa9.45□□□□□ -0.9
LINC00643-203ENST00000555518 ABCC1P33527 1531 aa9.45□□□□□ -0.9
LINC00643-203ENST00000555518 DIP2BQ9P265 1576 aa9.45□□□□□ -0.9
LINC00643-203ENST00000555518 BMP4P12644 408 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 ITGAEP38570 1179 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 SNRPNP63162 240 aaKnown RBP9.44□□□□□ -0.9
LINC00643-203ENST00000555518 USP4Q13107 963 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 FIGNL1Q6PIW4 674 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 RRAGCQ9HB90 399 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 PRM3Q9NNZ6 103 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 KIAA1107Q9UPP5 1409 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 SHANK2Q9UPX8 1470 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 SYCP2Q9BX26 1530 aa9.44□□□□□ -0.9
LINC00643-203ENST00000555518 MAP3K4Q9Y6R4 1608 aa9.43□□□□□ -0.9
LINC00643-203ENST00000555518 ADGRL2O95490 1459 aa9.43□□□□□ -0.9
LINC00643-203ENST00000555518 NAIPQ13075 1403 aa9.43□□□□□ -0.9
LINC00643-203ENST00000555518 PHKA2P46019 1235 aa9.43□□□□□ -0.9
LINC00643-203ENST00000555518 SLCO4C1Q6ZQN7 724 aa9.43□□□□□ -0.9
LINC00643-203ENST00000555518 IL27Q8NEV9 243 aa9.43□□□□□ -0.9
LINC00643-203ENST00000555518 RHBDD1Q8TEB9 315 aa9.43□□□□□ -0.9
LINC00643-203ENST00000555518 FHDC1Q9C0D6 1143 aaPredicted RBP9.43□□□□□ -0.9
LINC00643-203ENST00000555518 GCC2Q8IWJ2 1684 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 PLEKHH2Q8IVE3 1493 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 SETD5Q9C0A6 1442 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 SHISA8B8ZZ34 492 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 THBS1P07996 1170 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 CRISPLD1Q9H336 500 aa9.42□□□□□ -0.9
LINC00643-203ENST00000555518 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
LINC00643-203ENST00000555518 FANCAO15360 1455 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 CCDC141Q6ZP82 1450 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 RAB3GAP2Q9H2M9 1393 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 KRBA1A5PL33 1030 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 AMPD1P23109 780 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 MSX1P28360 303 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 BAG6P46379 1132 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 EIF4G2P78344 907 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00643-203ENST00000555518 UBAP2LQ14157 1087 aaKnown RBP9.41□□□□□ -0.9
LINC00643-203ENST00000555518 MAST1Q9Y2H9 1570 aa9.41□□□□□ -0.9
LINC00643-203ENST00000555518 CD109Q6YHK3 1445 aa9.4□□□□□ -0.9
LINC00643-203ENST00000555518 ADGBQ8N7X0 1667 aa9.4□□□□□ -0.9
LINC00643-203ENST00000555518 GNB5O14775 395 aa9.4□□□□□ -0.9
LINC00643-203ENST00000555518 GPR37L1O60883 481 aa9.4□□□□□ -0.9
LINC00643-203ENST00000555518 FGFR3P22607 806 aa9.4□□□□□ -0.9
LINC00643-203ENST00000555518 XP32Q5T750 250 aa9.4□□□□□ -0.9
LINC00643-203ENST00000555518 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
LINC00643-203ENST00000555518 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
LINC00643-203ENST00000555518 KDM6BO15054 1643 aa9.4□□□□□ -0.9
LINC00643-203ENST00000555518 NCOA1Q15788 1441 aa9.39□□□□□ -0.91
LINC00643-203ENST00000555518 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
LINC00643-203ENST00000555518 TRAPPC8Q9Y2L5 1435 aa9.39□□□□□ -0.91
LINC00643-203ENST00000555518 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
LINC00643-203ENST00000555518 ARAFP10398 606 aa9.39□□□□□ -0.91
LINC00643-203ENST00000555518 HNRNPMP52272 730 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00643-203ENST00000555518 EFCAB2Q5VUJ9 269 aa9.39□□□□□ -0.91
LINC00643-203ENST00000555518 RUBCNLQ9H714 662 aa9.39□□□□□ -0.91
LINC00643-203ENST00000555518 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
LINC00643-203ENST00000555518 KIF13AQ9H1H9 1805 aa9.38□□□□□ -0.91
LINC00643-203ENST00000555518 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
LINC00643-203ENST00000555518 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
LINC00643-203ENST00000555518 CDCA7Q9BWT1 371 aaPredicted RBP9.38□□□□□ -0.91
LINC00643-203ENST00000555518 NDFIP2Q9NV92 336 aa9.38□□□□□ -0.91
LINC00643-203ENST00000555518 CHIC2Q9UKJ5 165 aa9.38□□□□□ -0.91
LINC00643-203ENST00000555518 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
LINC00643-203ENST00000555518 CFAP74Q9C0B2 1584 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 ADGRL1O94910 1474 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 NEO1Q92859 1461 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 TLR1Q15399 786 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 NLRP8Q86W28 1048 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms