RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 PTPRCP08575 1304 aa14.77□□□□□ -0.04
IFT43-210ENST00000555370 RLBP1P12271 317 aa14.77□□□□□ -0.05
IFT43-210ENST00000555370 LBX1P52954 281 aa14.77□□□□□ -0.05
IFT43-210ENST00000555370 AIDAQ96BJ3 306 aa14.77□□□□□ -0.05
IFT43-210ENST00000555370 TJP1Q07157 1748 aa14.77□□□□□ -0.05
IFT43-210ENST00000555370 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
IFT43-210ENST00000555370 CLUAP1Q96AJ1 413 aa14.76□□□□□ -0.05
IFT43-210ENST00000555370 FMNL2Q96PY5 1086 aa14.76□□□□□ -0.05
IFT43-210ENST00000555370 RRAGCQ9HB90 399 aa14.76□□□□□ -0.05
IFT43-210ENST00000555370 COG6Q9Y2V7 657 aa14.76□□□□□ -0.05
IFT43-210ENST00000555370 PDE4DIPQ5VU43 2346 aa14.76□□□□□ -0.05
IFT43-210ENST00000555370 ABCC4O15439 1325 aa14.75□□□□□ -0.05
IFT43-210ENST00000555370 MVPQ14764 893 aaKnown RBP14.75□□□□□ -0.05
IFT43-210ENST00000555370 NECTIN2Q92692 538 aa14.75□□□□□ -0.05
IFT43-210ENST00000555370 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
IFT43-210ENST00000555370 BTAF1O14981 1849 aa14.75□□□□□ -0.05
IFT43-210ENST00000555370 PXDNLA1KZ92 1463 aa14.75□□□□□ -0.05
IFT43-210ENST00000555370 EIF2S2P20042 333 aaKnown RBP14.74□□□□□ -0.05
IFT43-210ENST00000555370 AAMPQ13685 434 aa14.74□□□□□ -0.05
IFT43-210ENST00000555370 CCDC136Q96JN2 1154 aa14.74□□□□□ -0.05
IFT43-210ENST00000555370 MKRN1Q9UHC7 482 aaKnown RBP14.74□□□□□ -0.05
IFT43-210ENST00000555370 QSER1Q2KHR3 1735 aa14.74□□□□□ -0.05
IFT43-210ENST00000555370 ZNF831Q5JPB2 1677 aa14.74□□□□□ -0.05
IFT43-210ENST00000555370 ARFGEF2Q9Y6D5 1785 aa14.73□□□□□ -0.05
IFT43-210ENST00000555370 SNRPA1P09661 255 aaKnown RBP14.73□□□□□ -0.05
IFT43-210ENST00000555370 TMEM57Q8N5G2 664 aa14.73□□□□□ -0.05
IFT43-210ENST00000555370 AFDNP55196 1824 aaKnown RBP14.72□□□□□ -0.05
IFT43-210ENST00000555370 B4GALNT3Q6L9W6 998 aa14.72□□□□□ -0.05
IFT43-210ENST00000555370 G2E3Q7L622 706 aa14.72□□□□□ -0.05
IFT43-210ENST00000555370 ITPRIPQ8IWB1 547 aa14.72□□□□□ -0.05
IFT43-210ENST00000555370 PIGBQ92521 554 aa14.72□□□□□ -0.05
IFT43-210ENST00000555370 CHPF2Q9P2E5 772 aa14.72□□□□□ -0.05
IFT43-210ENST00000555370 DDX19BQ9UMR2 479 aa14.72□□□□□ -0.05
IFT43-210ENST00000555370 KDM2BQ8NHM5 1336 aa14.71□□□□□ -0.05
IFT43-210ENST00000555370 PRAMEF22A3QJZ6 481 aa14.71□□□□□ -0.05
IFT43-210ENST00000555370 KCNQ4P56696 695 aa14.71□□□□□ -0.05
IFT43-210ENST00000555370 FLIIQ13045 1269 aa14.71□□□□□ -0.05
IFT43-210ENST00000555370 SLC27A3Q5K4L6 730 aa14.71□□□□□ -0.05
IFT43-210ENST00000555370 COL23A1Q86Y22 540 aaPredicted RBP14.71□□□□□ -0.05
IFT43-210ENST00000555370 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
IFT43-210ENST00000555370 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
IFT43-210ENST00000555370 C10orf71Q711Q0 1435 aa14.7□□□□□ -0.06
IFT43-210ENST00000555370 CHMP4BQ9H444 224 aaKnown RBP14.7□□□□□ -0.06
IFT43-210ENST00000555370 PRIM1P49642 420 aaKnown RBP14.69□□□□□ -0.06
IFT43-210ENST00000555370 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
IFT43-210ENST00000555370 ARHGAP27Q6ZUM4 889 aa14.69□□□□□ -0.06
IFT43-210ENST00000555370 SYTL4Q96C24 671 aaPredicted RBP14.69□□□□□ -0.06
IFT43-210ENST00000555370 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
IFT43-210ENST00000555370 HYPKQ9NX55 129 aa14.69□□□□□ -0.06
IFT43-210ENST00000555370 LY75O60449 1722 aa14.69□□□□□ -0.06
IFT43-210ENST00000555370 ERBB4Q15303 1308 aa14.68□□□□□ -0.06
IFT43-210ENST00000555370 C9orf131Q5VYM1 1079 aa14.68□□□□□ -0.06
IFT43-210ENST00000555370 INTS3Q68E01 1043 aaKnown RBP14.68□□□□□ -0.06
IFT43-210ENST00000555370 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
IFT43-210ENST00000555370 DDX21Q9NR30 783 aaKnown RBP eCLIP14.68□□□□□ -0.06
IFT43-210ENST00000555370 ASAP1Q9ULH1 1129 aa14.68□□□□□ -0.06
IFT43-210ENST00000555370 TUBGCP6Q96RT7 1819 aa14.68□□□□□ -0.06
IFT43-210ENST00000555370 PTCD1O75127 700 aaKnown RBP14.67□□□□□ -0.06
IFT43-210ENST00000555370 PHAXQ9H814 394 aaKnown RBP14.67□□□□□ -0.06
IFT43-210ENST00000555370 USP16Q9Y5T5 823 aa14.67□□□□□ -0.06
IFT43-210ENST00000555370 TAF1LQ8IZX4 1826 aa14.66□□□□□ -0.06
IFT43-210ENST00000555370 ANKRD36CQ5JPF3 1778 aa14.66□□□□□ -0.06
IFT43-210ENST00000555370 ANXA1P04083 346 aa14.66□□□□□ -0.06
IFT43-210ENST00000555370 CCT4P50991 539 aaKnown RBP14.66□□□□□ -0.06
IFT43-210ENST00000555370 PROSER3Q2NL68 480 aa14.66□□□□□ -0.06
IFT43-210ENST00000555370 TEX13AQ9BXU3 409 aaPredicted RBP14.66□□□□□ -0.06
IFT43-210ENST00000555370 F6X3S4 739 aa14.65□□□□□ -0.06
IFT43-210ENST00000555370 HSPA8P11142 646 aaKnown RBP14.65□□□□□ -0.06
IFT43-210ENST00000555370 PDIA6Q15084 440 aa14.65□□□□□ -0.06
IFT43-210ENST00000555370 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
IFT43-210ENST00000555370 TNRC18O15417 2968 aaPredicted RBP14.65□□□□□ -0.06
IFT43-210ENST00000555370 PRPF38BQ5VTL8 546 aaKnown RBP14.64□□□□□ -0.07
IFT43-210ENST00000555370 SMARCC1Q92922 1105 aaPredicted RBP14.64□□□□□ -0.07
IFT43-210ENST00000555370 DDX58O95786 925 aaKnown RBP14.63□□□□□ -0.07
IFT43-210ENST00000555370 MYL6BP14649 208 aa14.63□□□□□ -0.07
IFT43-210ENST00000555370 SLC4A10Q6U841 1118 aa14.63□□□□□ -0.07
IFT43-210ENST00000555370 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
IFT43-210ENST00000555370 WBP1LQ9NX94 342 aa14.63□□□□□ -0.07
IFT43-210ENST00000555370 BCS1LQ9Y276 419 aa14.63□□□□□ -0.07
IFT43-210ENST00000555370 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
IFT43-210ENST00000555370 ZBTB7BO15156 539 aaPredicted RBP14.62□□□□□ -0.07
IFT43-210ENST00000555370 KSR2Q6VAB6 950 aa14.62□□□□□ -0.07
IFT43-210ENST00000555370 CENPQQ7L2Z9 268 aaPredicted RBP14.62□□□□□ -0.07
IFT43-210ENST00000555370 DNAJC10Q8IXB1 793 aa14.62□□□□□ -0.07
IFT43-210ENST00000555370 DNAAF4Q8WXU2 420 aa14.62□□□□□ -0.07
IFT43-210ENST00000555370 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
IFT43-210ENST00000555370 MYH14Q7Z406 1995 aaKnown RBP14.62□□□□□ -0.07
IFT43-210ENST00000555370 NUP98P52948 1817 aa14.62□□□□□ -0.07
IFT43-210ENST00000555370 PI4KAP2A4QPH2 592 aa14.61□□□□□ -0.07
IFT43-210ENST00000555370 LRP10Q7Z4F1 713 aa14.61□□□□□ -0.07
IFT43-210ENST00000555370 PI4KAP1Q8N8J0 262 aa14.61□□□□□ -0.07
IFT43-210ENST00000555370 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
IFT43-210ENST00000555370 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
IFT43-210ENST00000555370 BCORQ6W2J9 1755 aa14.6□□□□□ -0.07
IFT43-210ENST00000555370 NBPF26B4DH59 902 aa14.6□□□□□ -0.07
IFT43-210ENST00000555370 STARD3NLO95772 234 aa14.6□□□□□ -0.07
IFT43-210ENST00000555370 NBPF10Q6P3W6 841 aaKnown RBP14.6□□□□□ -0.07
IFT43-210ENST00000555370 NBPF15Q8N660 670 aa14.6□□□□□ -0.07
IFT43-210ENST00000555370 SLC4A9Q96Q91 983 aa14.6□□□□□ -0.07
IFT43-210ENST00000555370 PIP4K2AP48426 406 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms