RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 NLGN1Q8N2Q7 840 aa16.23■□□□□ 0.19
SYNE2-219ENST00000555323 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
SYNE2-219ENST00000555323 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
SYNE2-219ENST00000555323 KIF6Q6ZMV9 814 aa16.22■□□□□ 0.19
SYNE2-219ENST00000555323 SMC4Q9NTJ3 1288 aa16.22■□□□□ 0.19
SYNE2-219ENST00000555323 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
SYNE2-219ENST00000555323 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
SYNE2-219ENST00000555323 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
SYNE2-219ENST00000555323 MSH5O43196 834 aa16.21■□□□□ 0.19
SYNE2-219ENST00000555323 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.19
SYNE2-219ENST00000555323 HLFQ16534 295 aa16.21■□□□□ 0.19
SYNE2-219ENST00000555323 KSR2Q6VAB6 950 aa16.21■□□□□ 0.19
SYNE2-219ENST00000555323 ARXQ96QS3 562 aa16.21■□□□□ 0.19
SYNE2-219ENST00000555323 PTPRCP08575 1304 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 BCAR3O75815 825 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 TM4SF1P30408 202 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 FKBP8Q14318 412 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 ARHGAP45Q92619 1136 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 MTFR1LQ9H019 292 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
SYNE2-219ENST00000555323 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
SYNE2-219ENST00000555323 TCIRG1Q13488 830 aa16.19■□□□□ 0.18
SYNE2-219ENST00000555323 RIC3Q7Z5B4 369 aa16.19■□□□□ 0.18
SYNE2-219ENST00000555323 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
SYNE2-219ENST00000555323 ZBTB3Q9H5J0 574 aa16.19■□□□□ 0.18
SYNE2-219ENST00000555323 CASZ1Q86V15 1759 aa16.18■□□□□ 0.18
SYNE2-219ENST00000555323 TRIM28Q13263 835 aaKnown RBP16.18■□□□□ 0.18
SYNE2-219ENST00000555323 FKBP5Q13451 457 aaPredicted RBP16.18■□□□□ 0.18
SYNE2-219ENST00000555323 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
SYNE2-219ENST00000555323 ZNF34Q8IZ26 560 aa16.18■□□□□ 0.18
SYNE2-219ENST00000555323 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
SYNE2-219ENST00000555323 NOB1Q9ULX3 412 aaKnown RBP16.18■□□□□ 0.18
SYNE2-219ENST00000555323 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
SYNE2-219ENST00000555323 C4AP0C0L4 1744 aa16.17■□□□□ 0.18
SYNE2-219ENST00000555323 ADCY9O60503 1353 aa16.17■□□□□ 0.18
SYNE2-219ENST00000555323 NFIXQ14938 502 aa16.17■□□□□ 0.18
SYNE2-219ENST00000555323 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
SYNE2-219ENST00000555323 SGIP1Q9BQI5 828 aa16.17■□□□□ 0.18
SYNE2-219ENST00000555323 MAP3K2Q9Y2U5 619 aa16.17■□□□□ 0.18
SYNE2-219ENST00000555323 IPO8O15397 1037 aaKnown RBP16.16■□□□□ 0.18
SYNE2-219ENST00000555323 ZBTB7AO95365 584 aa16.16■□□□□ 0.18
SYNE2-219ENST00000555323 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
SYNE2-219ENST00000555323 ISCA1Q9BUE6 129 aa16.16■□□□□ 0.18
SYNE2-219ENST00000555323 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
SYNE2-219ENST00000555323 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
SYNE2-219ENST00000555323 PTGER2P43116 358 aa16.14■□□□□ 0.17
SYNE2-219ENST00000555323 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
SYNE2-219ENST00000555323 SPON1Q9HCB6 807 aa16.14■□□□□ 0.17
SYNE2-219ENST00000555323 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNE2-219ENST00000555323 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
SYNE2-219ENST00000555323 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 F6X3S4 739 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
SYNE2-219ENST00000555323 MMP10P09238 476 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 COL24A1Q17RW2 1714 aa16.13■□□□□ 0.17
SYNE2-219ENST00000555323 IGKV5-2P06315 115 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 DDR1Q08345 913 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 NEXNQ0ZGT2 675 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 NLRP10Q86W26 655 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 LINS1Q8NG48 757 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 MYD88Q99836 296 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
SYNE2-219ENST00000555323 IBTKQ9P2D0 1353 aaPredicted RBP16.12■□□□□ 0.17
SYNE2-219ENST00000555323 SERPINB2P05120 415 aa16.11■□□□□ 0.17
SYNE2-219ENST00000555323 TRIM27P14373 513 aa16.11■□□□□ 0.17
SYNE2-219ENST00000555323 POLD1P28340 1107 aa16.11■□□□□ 0.17
SYNE2-219ENST00000555323 BICDL1Q6ZP65 573 aa16.11■□□□□ 0.17
SYNE2-219ENST00000555323 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
SYNE2-219ENST00000555323 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
SYNE2-219ENST00000555323 NUP98P52948 1817 aa16.1■□□□□ 0.17
SYNE2-219ENST00000555323 NEURL1BA8MQ27 555 aa16.1■□□□□ 0.17
SYNE2-219ENST00000555323 ATP5J2-PTCD1G3V325 749 aa16.1■□□□□ 0.17
SYNE2-219ENST00000555323 GPTP24298 496 aa16.1■□□□□ 0.17
SYNE2-219ENST00000555323 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
SYNE2-219ENST00000555323 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
SYNE2-219ENST00000555323 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
SYNE2-219ENST00000555323 ALDH1L1O75891 902 aa16.09■□□□□ 0.17
SYNE2-219ENST00000555323 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
SYNE2-219ENST00000555323 PPP1R42Q7Z4L9 355 aa16.09■□□□□ 0.17
SYNE2-219ENST00000555323 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
SYNE2-219ENST00000555323 ABCC4O15439 1325 aa16.09■□□□□ 0.17
SYNE2-219ENST00000555323 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
SYNE2-219ENST00000555323 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
SYNE2-219ENST00000555323 GCKRQ14397 625 aa16.08■□□□□ 0.16
SYNE2-219ENST00000555323 CWF19L2Q2TBE0 894 aaKnown RBP16.08■□□□□ 0.16
SYNE2-219ENST00000555323 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
SYNE2-219ENST00000555323 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.16
SYNE2-219ENST00000555323 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
SYNE2-219ENST00000555323 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
SYNE2-219ENST00000555323 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
SYNE2-219ENST00000555323 CWC25Q9NXE8 425 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms