RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 TSR2Q969E8 191 aaKnown RBP16.39■□□□□ 0.21
SIX1-203ENST00000554986 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
SIX1-203ENST00000554986 GNAI1P63096 354 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 DZIP1LQ8IYY4 767 aaKnown RBP16.38■□□□□ 0.21
SIX1-203ENST00000554986 PROM2Q8N271 834 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 GOLGA6L22H0YM25 854 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 ZNF445P59923 1031 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 TTC5Q8N0Z6 440 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
SIX1-203ENST00000554986 TNNQ9UQP3 1299 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
SIX1-203ENST00000554986 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
SIX1-203ENST00000554986 SIK1P57059 783 aa16.37■□□□□ 0.21
SIX1-203ENST00000554986 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
SIX1-203ENST00000554986 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
SIX1-203ENST00000554986 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
SIX1-203ENST00000554986 TJP1Q07157 1748 aa16.37■□□□□ 0.21
SIX1-203ENST00000554986 BAG6P46379 1132 aa16.37■□□□□ 0.21
SIX1-203ENST00000554986 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
SIX1-203ENST00000554986 KRT24Q2M2I5 525 aa16.37■□□□□ 0.21
SIX1-203ENST00000554986 DDX19BQ9UMR2 479 aa16.37■□□□□ 0.21
SIX1-203ENST00000554986 NOL7Q9UMY1 257 aaKnown RBP16.37■□□□□ 0.21
SIX1-203ENST00000554986 C5P01031 1676 aa16.36■□□□□ 0.21
SIX1-203ENST00000554986 RREB1Q92766 1687 aa16.36■□□□□ 0.21
SIX1-203ENST00000554986 MCM5P33992 734 aa16.36■□□□□ 0.21
SIX1-203ENST00000554986 TXNRD1Q16881 649 aa16.36■□□□□ 0.21
SIX1-203ENST00000554986 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
SIX1-203ENST00000554986 LRRC4BQ9NT99 713 aa16.36■□□□□ 0.21
SIX1-203ENST00000554986 ZNF831Q5JPB2 1677 aa16.35■□□□□ 0.21
SIX1-203ENST00000554986 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
SIX1-203ENST00000554986 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
SIX1-203ENST00000554986 PDLIM2Q96JY6 352 aa16.35■□□□□ 0.21
SIX1-203ENST00000554986 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
SIX1-203ENST00000554986 ITPK1Q13572 414 aa16.35■□□□□ 0.21
SIX1-203ENST00000554986 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
SIX1-203ENST00000554986 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
SIX1-203ENST00000554986 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
SIX1-203ENST00000554986 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
SIX1-203ENST00000554986 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.21
SIX1-203ENST00000554986 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.21
SIX1-203ENST00000554986 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.21
SIX1-203ENST00000554986 DYNC1I1O14576 645 aa16.33■□□□□ 0.21
SIX1-203ENST00000554986 ATP6V1AP38606 617 aa16.33■□□□□ 0.21
SIX1-203ENST00000554986 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.21
SIX1-203ENST00000554986 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.2
SIX1-203ENST00000554986 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
SIX1-203ENST00000554986 KIF2CQ99661 725 aa16.33■□□□□ 0.2
SIX1-203ENST00000554986 NUCB1Q02818 461 aa16.32■□□□□ 0.2
SIX1-203ENST00000554986 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
SIX1-203ENST00000554986 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
SIX1-203ENST00000554986 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
SIX1-203ENST00000554986 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
SIX1-203ENST00000554986 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
SIX1-203ENST00000554986 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
SIX1-203ENST00000554986 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
SIX1-203ENST00000554986 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
SIX1-203ENST00000554986 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
SIX1-203ENST00000554986 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
SIX1-203ENST00000554986 EXOSC9Q06265 439 aaKnown RBP16.3■□□□□ 0.2
SIX1-203ENST00000554986 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
SIX1-203ENST00000554986 C4BP0C0L5 1744 aa16.3■□□□□ 0.2
SIX1-203ENST00000554986 BAG4O95429 457 aaKnown RBP16.29■□□□□ 0.2
SIX1-203ENST00000554986 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
SIX1-203ENST00000554986 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
SIX1-203ENST00000554986 SOCS7O14512 581 aa16.28■□□□□ 0.2
SIX1-203ENST00000554986 ZBTB40Q9NUA8 1239 aa16.28■□□□□ 0.2
SIX1-203ENST00000554986 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.2
SIX1-203ENST00000554986 TRIM27P14373 513 aa16.27■□□□□ 0.2
SIX1-203ENST00000554986 ATF7IPQ6VMQ6 1270 aa16.27■□□□□ 0.2
SIX1-203ENST00000554986 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.27■□□□□ 0.19
SIX1-203ENST00000554986 ZKSCAN5Q9Y2L8 839 aa16.27■□□□□ 0.19
SIX1-203ENST00000554986 R3HCC1Q9Y3T6 440 aaKnown RBP16.27■□□□□ 0.19
SIX1-203ENST00000554986 SSFA2P28290 1259 aa16.26■□□□□ 0.19
SIX1-203ENST00000554986 NUCB2P80303 420 aa16.26■□□□□ 0.19
SIX1-203ENST00000554986 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
SIX1-203ENST00000554986 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
SIX1-203ENST00000554986 UQCRHLA0A096LP55 91 aa16.26■□□□□ 0.19
SIX1-203ENST00000554986 UQCRHP07919 91 aa16.26■□□□□ 0.19
SIX1-203ENST00000554986 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
SIX1-203ENST00000554986 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
SIX1-203ENST00000554986 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
SIX1-203ENST00000554986 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
SIX1-203ENST00000554986 TEX13AQ9BXU3 409 aaPredicted RBP16.26■□□□□ 0.19
SIX1-203ENST00000554986 TUBGCP6Q96RT7 1819 aa16.25■□□□□ 0.19
SIX1-203ENST00000554986 A1BGP04217 495 aa16.25■□□□□ 0.19
SIX1-203ENST00000554986 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
SIX1-203ENST00000554986 RBM10P98175 930 aaKnown RBP16.25■□□□□ 0.19
SIX1-203ENST00000554986 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
SIX1-203ENST00000554986 CHD1LQ86WJ1 897 aa16.25■□□□□ 0.19
SIX1-203ENST00000554986 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
SIX1-203ENST00000554986 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
SIX1-203ENST00000554986 CNTNAP4Q9C0A0 1308 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 VAMP4O75379 141 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 CYP2E1P05181 493 aaPredicted RBP16.24■□□□□ 0.19
SIX1-203ENST00000554986 HOXB7P09629 217 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 UBR3Q6ZT12 1888 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
SIX1-203ENST00000554986 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms