RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 NEK1Q96PY6 1258 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 ZMYND15Q9H091 742 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 DDX21Q9NR30 783 aaKnown RBP eCLIP4.58□□□□□ -1.68
KTN1-217ENST00000554831 CHPF2Q9P2E5 772 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 CNPY2Q9Y2B0 182 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 TET3O43151 1660 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 A0A087WZG4 1122 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 MYL6BP14649 208 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 CEBPAP49715 358 aaPredicted RBP4.58□□□□□ -1.68
KTN1-217ENST00000554831 CCDC158Q5M9N0 1113 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 NECAB1Q8N987 351 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 KIF2CQ99661 725 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 PTCH1Q13635 1447 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 SSH2Q76I76 1423 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 EFCAB6Q5THR3 1501 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 ATF3P18847 181 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 ZC3H6P61129 1189 aaKnown RBP4.58□□□□□ -1.68
KTN1-217ENST00000554831 PTPN14Q15678 1187 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 ANKRD13DQ6ZTN6 518 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 KIF18AQ8NI77 898 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 TCEANC2Q96MN5 208 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 PHAXQ9H814 394 aaKnown RBP4.58□□□□□ -1.68
KTN1-217ENST00000554831 MAP3K2Q9Y2U5 619 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 SBNO1A3KN83 1393 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 CCDC171Q6TFL3 1326 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 NBPF7P0C2Y1 421 aaPredicted RBP4.58□□□□□ -1.68
KTN1-217ENST00000554831 SFPQP23246 707 aaKnown RBP eCLIP4.58□□□□□ -1.68
KTN1-217ENST00000554831 GPS2Q13227 327 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 KLHL34Q8N239 644 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 ZFYVE16Q7Z3T8 1539 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 MAP3K4Q9Y6R4 1608 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 KDM4AO75164 1064 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 CAMK4Q16566 473 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 AKAP4Q5JQC9 854 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 ZNF771Q7L3S4 317 aaPredicted RBP4.58□□□□□ -1.68
KTN1-217ENST00000554831 CCDC186Q7Z3E2 898 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 BRF1Q92994 677 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 CCP110O43303 1012 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 CCDC57Q2TAC2 916 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 UBE3BQ7Z3V4 1068 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 ANKRD20A12PQ8NF67 263 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 IL17REQ8NFR9 667 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 PIBF1Q8WXW3 757 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 PALD1Q9ULE6 856 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 TBC1D2BQ9UPU7 963 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 TNNT1P13805 278 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 FOSBP53539 338 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 PDLIM2Q96JY6 352 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 FAM135BQ49AJ0 1406 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 CDC42BPBQ9Y5S2 1711 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 MAP3K5Q99683 1374 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 IPO7O95373 1038 aaKnown RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 SART3Q15020 963 aaKnown RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 TSR1Q2NL82 804 aaKnown RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 OLFM4Q6UX06 510 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 AEBP2Q6ZN18 517 aaPredicted RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 NFXL1Q6ZNB6 911 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 IP6K1Q92551 441 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
KTN1-217ENST00000554831 CROCC2H7BZ55 1655 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 TYRO3Q06418 890 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 SNX14Q9Y5W7 946 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 MADDQ8WXG6 1647 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 ATP7BP35670 1465 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 SMC2O95347 1197 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 GTF2E1P29083 439 aaPredicted RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 GSDMDP57764 484 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 CABP4P57796 275 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 TEX35Q5T0J7 233 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 CREB3L3Q68CJ9 461 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 COPS6Q7L5N1 327 aa4.57□□□□□ -1.68
KTN1-217ENST00000554831 CCAR2Q8N163 923 aaKnown RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 C16orf45Q96MC5 204 aaPredicted RBP4.57□□□□□ -1.68
KTN1-217ENST00000554831 ERICH2A1L162 156 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 SMTNL1A8MU46 457 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 CDKL5O76039 1030 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 IFIT1P09914 478 aaKnown RBP4.56□□□□□ -1.68
KTN1-217ENST00000554831 HOXC9P31274 260 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 FKBP4Q02790 459 aaKnown RBP eCLIP4.56□□□□□ -1.68
KTN1-217ENST00000554831 UBXN4Q92575 508 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 FBXW7Q969H0 707 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 C8orf76Q96K31 380 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 ZNF830Q96NB3 372 aaPredicted RBP4.56□□□□□ -1.68
KTN1-217ENST00000554831 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.56□□□□□ -1.68
KTN1-217ENST00000554831 CLIP2Q9UDT6 1046 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 PA2G4Q9UQ80 394 aaKnown RBP4.56□□□□□ -1.68
KTN1-217ENST00000554831 CPSF1Q10570 1443 aaKnown RBP4.56□□□□□ -1.68
KTN1-217ENST00000554831 CYP2E1P05181 493 aaPredicted RBP4.56□□□□□ -1.68
KTN1-217ENST00000554831 XBP1P17861 261 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 IMMTQ16891 758 aaKnown RBP4.56□□□□□ -1.68
KTN1-217ENST00000554831 TRIM22Q8IYM9 498 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 RASSF8Q8NHQ8 419 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 GPT2Q8TD30 523 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 PAXBP1Q9Y5B6 917 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 CLTCL1P53675 1640 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 MED14O60244 1454 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 CCDC66A2RUB6 948 aa4.56□□□□□ -1.68
KTN1-217ENST00000554831 SNRPA1P09661 255 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms