RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SRGNP10124 158 aa32.39■■■□□ 2.78
FOXA1-204ENST00000554607 CLEC4GQ6UXB4 293 aa32.39■■■□□ 2.78
FOXA1-204ENST00000554607 RTF1Q92541 710 aaKnown RBP32.39■■■□□ 2.78
FOXA1-204ENST00000554607 USP16Q9Y5T5 823 aa32.39■■■□□ 2.78
FOXA1-204ENST00000554607 FER1L6Q2WGJ9 1857 aa32.39■■■□□ 2.78
FOXA1-204ENST00000554607 DICER1Q9UPY3 1922 aaKnown RBP32.38■■■□□ 2.77
FOXA1-204ENST00000554607 COL13A1Q5TAT6 717 aaPredicted RBP32.38■■■□□ 2.77
FOXA1-204ENST00000554607 COL11A2P13942 1736 aaPredicted RBP32.37■■■□□ 2.77
FOXA1-204ENST00000554607 ZNF652Q9Y2D9 606 aa32.37■■■□□ 2.77
FOXA1-204ENST00000554607 SNRPA1P09661 255 aaKnown RBP32.36■■■□□ 2.77
FOXA1-204ENST00000554607 PRPF40BQ6NWY9 871 aaKnown RBP32.36■■■□□ 2.77
FOXA1-204ENST00000554607 NBPF5PQ86XG9 351 aaPredicted RBP32.35■■■□□ 2.77
FOXA1-204ENST00000554607 U2AF1L5P0DN76 240 aaPredicted RBP32.33■■■□□ 2.77
FOXA1-204ENST00000554607 U2AF1Q01081 240 aaKnown RBP eCLIP32.33■■■□□ 2.77
FOXA1-204ENST00000554607 BCORQ6W2J9 1755 aa32.32■■■□□ 2.77
FOXA1-204ENST00000554607 RGL2O15211 777 aa32.32■■■□□ 2.76
FOXA1-204ENST00000554607 SLX4Q8IY92 1834 aa32.32■■■□□ 2.76
FOXA1-204ENST00000554607 PCNTO95613 3336 aa32.32■■■□□ 2.76
FOXA1-204ENST00000554607 CHADLQ6NUI6 762 aa32.31■■■□□ 2.76
FOXA1-204ENST00000554607 HTATSF1O43719 755 aaKnown RBP32.3■■■□□ 2.76
FOXA1-204ENST00000554607 PIP4K2AP48426 406 aaPredicted RBP32.3■■■□□ 2.76
FOXA1-204ENST00000554607 TPTE2Q6XPS3 522 aa32.3■■■□□ 2.76
FOXA1-204ENST00000554607 MCM10Q7L590 875 aa32.3■■■□□ 2.76
FOXA1-204ENST00000554607 PRAMEF22A3QJZ6 481 aa32.29■■■□□ 2.76
FOXA1-204ENST00000554607 DDNO94850 711 aaPredicted RBP32.29■■■□□ 2.76
FOXA1-204ENST00000554607 NPR1P16066 1061 aa32.28■■■□□ 2.76
FOXA1-204ENST00000554607 CCDC93Q567U6 631 aa32.28■■■□□ 2.76
FOXA1-204ENST00000554607 TNS4Q8IZW8 715 aa32.28■■■□□ 2.76
FOXA1-204ENST00000554607 ARFGEF2Q9Y6D5 1785 aa32.27■■■□□ 2.76
FOXA1-204ENST00000554607 IQCA1LA6NCM1 817 aa32.27■■■□□ 2.76
FOXA1-204ENST00000554607 HSPA1AP0DMV8 641 aaKnown RBP32.27■■■□□ 2.76
FOXA1-204ENST00000554607 HSPA1BP0DMV9 641 aaKnown RBP32.27■■■□□ 2.76
FOXA1-204ENST00000554607 C7orf43Q8WVR3 580 aa32.27■■■□□ 2.76
FOXA1-204ENST00000554607 NIP7Q9Y221 180 aaKnown RBP eCLIP32.26■■■□□ 2.75
FOXA1-204ENST00000554607 CACNA1SQ13698 1873 aa32.25■■■□□ 2.75
FOXA1-204ENST00000554607 KLRG2A4D1S0 409 aaPredicted RBP32.25■■■□□ 2.75
FOXA1-204ENST00000554607 PPP2R1AP30153 589 aa32.25■■■□□ 2.75
FOXA1-204ENST00000554607 CREBZFQ9NS37 354 aa32.25■■■□□ 2.75
FOXA1-204ENST00000554607 NBPF26B4DH59 902 aa32.23■■■□□ 2.75
FOXA1-204ENST00000554607 NBPF10Q6P3W6 841 aaKnown RBP32.23■■■□□ 2.75
FOXA1-204ENST00000554607 NBPF15Q8N660 670 aa32.23■■■□□ 2.75
FOXA1-204ENST00000554607 DCTN1Q14203 1278 aa32.22■■■□□ 2.75
FOXA1-204ENST00000554607 TAF7Q15545 349 aaPredicted RBP32.22■■■□□ 2.75
FOXA1-204ENST00000554607 L3MBTL3Q96JM7 780 aaPredicted RBP32.22■■■□□ 2.75
FOXA1-204ENST00000554607 FKBP4Q02790 459 aaKnown RBP eCLIP32.21■■■□□ 2.75
FOXA1-204ENST00000554607 RTKN2Q8IZC4 609 aa32.21■■■□□ 2.75
FOXA1-204ENST00000554607 POTEIP0CG38 1075 aa32.19■■■□□ 2.74
FOXA1-204ENST00000554607 POTEJP0CG39 1038 aa32.19■■■□□ 2.74
FOXA1-204ENST00000554607 ALDH1B1P30837 517 aa32.19■■■□□ 2.74
FOXA1-204ENST00000554607 LDHDQ86WU2 507 aa32.19■■■□□ 2.74
FOXA1-204ENST00000554607 GTF2E1P29083 439 aaPredicted RBP32.18■■■□□ 2.74
FOXA1-204ENST00000554607 NEFMP07197 916 aa32.17■■■□□ 2.74
FOXA1-204ENST00000554607 TAF1DQ9H5J8 278 aaPredicted RBP32.17■■■□□ 2.74
FOXA1-204ENST00000554607 FAM177BA6PVY3 158 aa32.16■■■□□ 2.74
FOXA1-204ENST00000554607 PNISRQ8TF01 805 aaKnown RBP32.16■■■□□ 2.74
FOXA1-204ENST00000554607 ZNF277Q9NRM2 450 aaPredicted RBP32.16■■■□□ 2.74
FOXA1-204ENST00000554607 SCN4AP35499 1836 aa32.16■■■□□ 2.74
FOXA1-204ENST00000554607 CAPN15O75808 1086 aa32.15■■■□□ 2.74
FOXA1-204ENST00000554607 MKRN1Q9UHC7 482 aaKnown RBP32.15■■■□□ 2.74
FOXA1-204ENST00000554607 HLFQ16534 295 aa32.14■■■□□ 2.74
FOXA1-204ENST00000554607 NYXQ9GZU5 481 aa32.14■■■□□ 2.74
FOXA1-204ENST00000554607 PASKQ96RG2 1323 aa32.12■■■□□ 2.73
FOXA1-204ENST00000554607 MIS18AQ9NYP9 233 aa32.12■■■□□ 2.73
FOXA1-204ENST00000554607 HACL1Q9UJ83 578 aa32.12■■■□□ 2.73
FOXA1-204ENST00000554607 ERVV-1B6SEH8 477 aa32.11■■■□□ 2.73
FOXA1-204ENST00000554607 ZNF541Q9H0D2 1346 aa32.1■■■□□ 2.73
FOXA1-204ENST00000554607 IARSP41252 1262 aaKnown RBP32.1■■■□□ 2.73
FOXA1-204ENST00000554607 OLFM4Q6UX06 510 aa32.1■■■□□ 2.73
FOXA1-204ENST00000554607 SYNE4Q8N205 404 aa32.1■■■□□ 2.73
FOXA1-204ENST00000554607 EAPPQ56P03 285 aaPredicted RBP32.09■■■□□ 2.73
FOXA1-204ENST00000554607 CNTNAP1P78357 1384 aa32.08■■■□□ 2.73
FOXA1-204ENST00000554607 FZD9O00144 591 aa32.08■■■□□ 2.73
FOXA1-204ENST00000554607 CC2D2BQ6DHV5 1058 aa32.08■■■□□ 2.73
FOXA1-204ENST00000554607 PNMA8AQ86V59 439 aaPredicted RBP32.08■■■□□ 2.73
FOXA1-204ENST00000554607 NGEFQ8N5V2 710 aa32.08■■■□□ 2.73
FOXA1-204ENST00000554607 CLEC11AQ9Y240 323 aa32.08■■■□□ 2.73
FOXA1-204ENST00000554607 CRY2Q49AN0 593 aa32.07■■■□□ 2.72
FOXA1-204ENST00000554607 KIF6Q6ZMV9 814 aa32.07■■■□□ 2.72
FOXA1-204ENST00000554607 PSMD1Q99460 953 aa32.07■■■□□ 2.72
FOXA1-204ENST00000554607 LAMB4A4D0S4 1761 aa32.07■■■□□ 2.72
FOXA1-204ENST00000554607 MAP3K15Q6ZN16 1313 aa32.06■■■□□ 2.72
FOXA1-204ENST00000554607 TMEM88BA6NKF7 163 aa32.06■■■□□ 2.72
FOXA1-204ENST00000554607 ITGBL1O95965 494 aaPredicted RBP32.06■■■□□ 2.72
FOXA1-204ENST00000554607 EPHX2P34913 555 aa32.06■■■□□ 2.72
FOXA1-204ENST00000554607 JDP2Q8WYK2 163 aa32.06■■■□□ 2.72
FOXA1-204ENST00000554607 GPC2Q8N158 579 aa32.05■■■□□ 2.72
FOXA1-204ENST00000554607 GRIPAP1Q4V328 841 aa32.04■■■□□ 2.72
FOXA1-204ENST00000554607 RRP7AQ9Y3A4 280 aaKnown RBP32.04■■■□□ 2.72
FOXA1-204ENST00000554607 EIF4A1P60842 406 aaKnown RBP32.03■■■□□ 2.72
FOXA1-204ENST00000554607 NUTM1Q86Y26 1132 aa32.03■■■□□ 2.72
FOXA1-204ENST00000554607 RPGRQ92834 1020 aaKnown RBP32.03■■■□□ 2.72
FOXA1-204ENST00000554607 PNNQ9H307 717 aaKnown RBP32.02■■■□□ 2.72
FOXA1-204ENST00000554607 HOXA10P31260 410 aaPredicted RBP32.01■■■□□ 2.71
FOXA1-204ENST00000554607 ABCC12Q96J65 1359 aa32.01■■■□□ 2.71
FOXA1-204ENST00000554607 RNF123Q5XPI4 1314 aa32■■■□□ 2.71
FOXA1-204ENST00000554607 IBTKQ9P2D0 1353 aaPredicted RBP32■■■□□ 2.71
FOXA1-204ENST00000554607 NFE2L2Q16236 605 aa32■■■□□ 2.71
FOXA1-204ENST00000554607 TTLL7Q6ZT98 887 aa32■■■□□ 2.71
FOXA1-204ENST00000554607 NUP98P52948 1817 aa32■■■□□ 2.71
FOXA1-204ENST00000554607 KDM3BQ7LBC6 1761 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms