RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 V9GYY5 206 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-212ENST00000554584 CDK19Q9BWU1 502 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 GOLGA6CA6NDK9 693 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 GOLGA6BA6NDN3 693 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 VIMP08670 466 aaKnown RBP3.84□□□□□ -1.8
SYNE2-212ENST00000554584 GOLGA6DP0CG33 693 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 HSP90B2PQ58FF3 399 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 PPFIBP1Q86W92 1011 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 JMYQ8N9B5 988 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 CDC26Q8NHZ8 85 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 PRAM1Q96QH2 718 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 GOLGA6AQ9NYA3 693 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 NOD1Q9Y239 953 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 LETM1O95202 739 aaPredicted RBP3.84□□□□□ -1.8
SYNE2-212ENST00000554584 ZNF467Q7Z7K2 595 aaPredicted RBP3.84□□□□□ -1.8
SYNE2-212ENST00000554584 PHLDB2Q86SQ0 1253 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 RYBPQ8N488 228 aaPredicted RBP3.84□□□□□ -1.8
SYNE2-212ENST00000554584 TCP10Q12799 353 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 MTHFSP49914 203 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 ZNF653Q96CK0 615 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 ZKSCAN3Q9BRR0 538 aa3.84□□□□□ -1.8
SYNE2-212ENST00000554584 SYNJ2BP-COX16A0A087WUM0 186 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 SATB1Q01826 763 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 COX16Q9P0S2 106 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 CTNNA2P26232 953 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 DDX58O95786 925 aaKnown RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 SERPINC1P01008 464 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 NUCB2P80303 420 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 GDPD2Q9HCC8 539 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 FAM117BQ6P1L5 589 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 UBTFL1P0CB47 393 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 RNF34Q969K3 372 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 ZCWPW1Q9H0M4 648 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 ZHX1Q9UKY1 873 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 ZKSCAN1P17029 563 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 RNASE9P60153 205 aaKnown RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 ZBTB41Q5SVQ8 909 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 HINFPQ9BQA5 517 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 MAGED2Q9UNF1 606 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 MYCLP12524 364 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 UAP1Q16222 522 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 RPUSD2Q8IZ73 545 aaKnown RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 BOLA2Q9H3K6 86 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 TRMT112Q9UI30 125 aaKnown RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 SNAP25P60880 206 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 UPF3BQ9BZI7 483 aaKnown RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 KIF9Q9HAQ2 790 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 GBP2P32456 591 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-212ENST00000554584 IL1RL1Q01638 556 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 FAM8A1Q9UBU6 413 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 TFCP2L1Q9NZI6 479 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 SYCP3Q8IZU3 236 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 PSMD2Q13200 908 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 GPCPD1Q9NPB8 672 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 ANKRD18AQ8IVF6 992 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 EMILIN1Q9Y6C2 1016 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 ZPR1O75312 459 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 TIGD1Q96MW7 591 aa3.83□□□□□ -1.8
SYNE2-212ENST00000554584 ATP1A2P50993 1020 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 ZNF668Q96K58 619 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 MKNK2Q9HBH9 465 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 TRMT1Q9NXH9 659 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 HDGFL1Q5TGJ6 251 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 DOK7Q18PE1 504 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC40Q4G0X9 1142 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CABP1Q9NZU7 370 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 RNF20Q5VTR2 975 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC65Q8IXS2 484 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 RBM27Q9P2N5 1060 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 STAMBPO95630 424 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 JAKMIP1Q96N16 626 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 PPP1R21Q6ZMI0 780 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 TAF4BQ92750 862 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 ZNHIT6Q9NWK9 470 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 SPG7Q9UQ90 795 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CACNA1IQ9P0X4 2223 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 IGSF3O75054 1194 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 PPP4R3AQ6IN85 833 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CPXCR1Q8N123 301 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CHMP2AO43633 222 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 SLC3A2P08195 630 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 HSP90AA5PQ58FG0 334 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 MIGA1Q8NAN2 632 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 NACA2Q9H009 215 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 SHTN1A0MZ66 631 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 MYO1BO43795 1136 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CLNS1AP54105 237 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC83Q8IWF9 413 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC63Q8NA47 563 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 ZKSCAN2Q63HK3 967 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CCER2I3L3R5 266 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 NDC80O14777 642 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 SKAP2O75563 359 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC184Q52MB2 194 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 ACBD3Q9H3P7 528 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 ARID5AQ03989 594 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CAVIN1Q6NZI2 390 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 SLC12A5Q9H2X9 1139 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 ARGLU1Q9NWB6 273 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 MAGEB10Q96LZ2 347 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms