RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 SGSM2O43147 1006 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 PHACTR2O75167 634 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 GPTP24298 496 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 C1QTNF12Q5T7M4 302 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 BICC1Q9H694 974 aaKnown RBP13.18□□□□□ -0.3
NUMB-212ENST00000554546 MCM8Q9UJA3 840 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 NEMFO60524 1076 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 PPFIA4O75335 1185 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 URI1O94763 535 aaPredicted RBP13.17□□□□□ -0.3
NUMB-212ENST00000554546 TMF1P82094 1093 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 INTS3Q68E01 1043 aaKnown RBP13.17□□□□□ -0.3
NUMB-212ENST00000554546 CD248Q9HCU0 757 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
NUMB-212ENST00000554546 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
NUMB-212ENST00000554546 MTA1Q13330 715 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 TRAK1Q9UPV9 953 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 GCKP35557 465 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 SNX1Q13596 522 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
NUMB-212ENST00000554546 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 LAMC3Q9Y6N6 1575 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 SRGAP3O43295 1099 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
NUMB-212ENST00000554546 TADA3O75528 432 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 CCZ1BP86790 482 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 CCZ1P86791 482 aaPredicted RBP13.16□□□□□ -0.3
NUMB-212ENST00000554546 MAP3K11Q16584 847 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 NUTM2GQ5VZR2 741 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 C1orf115Q9H7X2 142 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 EXOC5O00471 708 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 COQ9O75208 318 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 DNAJC14Q6Y2X3 702 aaPredicted RBP13.16□□□□□ -0.3
NUMB-212ENST00000554546 ARMCX6Q7L4S7 300 aa13.16□□□□□ -0.3
NUMB-212ENST00000554546 PEX19P40855 299 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 RWDD2BP57060 319 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
NUMB-212ENST00000554546 IGF1RP08069 1367 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 GRIK3Q13003 919 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 TRIM74Q86UV6 250 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 TRIM73Q86UV7 250 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 KLHL23Q8NBE8 558 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 TESK2Q96S53 571 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 KIF9Q9HAQ2 790 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 CUL4AQ13619 759 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 CRYMQ14894 314 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 DDX11Q96FC9 970 aa13.15□□□□□ -0.3
NUMB-212ENST00000554546 EFCAB8A8MWE9 144 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 TRAF1Q13077 416 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 CLNS1AP54105 237 aaKnown RBP13.14□□□□□ -0.31
NUMB-212ENST00000554546 PARD6BQ9BYG5 372 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 PLB1Q6P1J6 1458 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
NUMB-212ENST00000554546 ZNF165P49910 485 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 GNAI1P63096 354 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
NUMB-212ENST00000554546 PPP1R13BQ96KQ4 1090 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
NUMB-212ENST00000554546 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
NUMB-212ENST00000554546 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
NUMB-212ENST00000554546 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
NUMB-212ENST00000554546 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 CABS1Q96KC9 395 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 NUP62CLQ9H1M0 184 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 ABCC2Q92887 1545 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
NUMB-212ENST00000554546 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 ERC2O15083 957 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 ECEL1O95672 775 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 MCM2P49736 904 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 RBBP5Q15291 538 aaKnown RBP13.13□□□□□ -0.31
NUMB-212ENST00000554546 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
NUMB-212ENST00000554546 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 ZBTB10Q96DT7 871 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 KDM5DQ9BY66 1539 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 PLEKHD1A6NEE1 506 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
NUMB-212ENST00000554546 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
NUMB-212ENST00000554546 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 TSR2Q969E8 191 aaKnown RBP13.13□□□□□ -0.31
NUMB-212ENST00000554546 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
NUMB-212ENST00000554546 INTS4Q96HW7 963 aaKnown RBP13.13□□□□□ -0.31
NUMB-212ENST00000554546 CLIC6Q96NY7 704 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms