RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CHMP4AQ9BY43 222 aa18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 CCDC8Q9H0W5 538 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 USP54Q70EL1 1684 aa18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 KRT28Q7Z3Y7 464 aa18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 KLHDC4Q8TBB5 520 aa18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 SUCLG2Q96I99 432 aa18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-203ENST00000554514 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 GADD45BO75293 160 aaPredicted RBP18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 PTH1RQ03431 593 aa18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 DDX17Q92841 729 aaKnown RBP18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 NLRP2Q9NX02 1062 aa18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 N4BP2Q86UW6 1770 aaPredicted RBP18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 BICC1Q9H694 974 aaKnown RBP18.93■□□□□ 0.62
ARHGEF40-203ENST00000554514 ECHDC1Q9NTX5 307 aa18.92■□□□□ 0.62
ARHGEF40-203ENST00000554514 RIC3Q7Z5B4 369 aa18.92■□□□□ 0.62
ARHGEF40-203ENST00000554514 PPP1R9BQ96SB3 815 aa18.91■□□□□ 0.62
ARHGEF40-203ENST00000554514 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
ARHGEF40-203ENST00000554514 GRM8O00222 908 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 ALDH1L1O75891 902 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 KCNJ4P48050 445 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 LRSAM1Q6UWE0 723 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 RUFY3Q7L099 469 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 GPATCH3Q96I76 525 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 JAKMIP1Q96N16 626 aaKnown RBP18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 LARGE1O95461 756 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 MBD3O95983 291 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 G3BP1Q13283 466 aaKnown RBP eCLIP18.9■□□□□ 0.622e-6■□□□□ 10.4
ARHGEF40-203ENST00000554514 USP48Q86UV5 1035 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 HYPKQ9NX55 129 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 TLR7Q9NYK1 1049 aaKnown RBP18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 ADCK5Q3MIX3 580 aa18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 WDR33Q9C0J8 1336 aaKnown RBP18.9■□□□□ 0.62
ARHGEF40-203ENST00000554514 DDX58O95786 925 aaKnown RBP18.89■□□□□ 0.61
ARHGEF40-203ENST00000554514 CCDC83Q8IWF9 413 aa18.89■□□□□ 0.61
ARHGEF40-203ENST00000554514 RAPGEF4Q8WZA2 1011 aa18.89■□□□□ 0.61
ARHGEF40-203ENST00000554514 FAM227BQ96M60 508 aa18.89■□□□□ 0.61
ARHGEF40-203ENST00000554514 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
ARHGEF40-203ENST00000554514 NFATC2IPQ8NCF5 419 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 RUFY2Q8WXA3 655 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 TTC14Q96N46 770 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 LIMCH1Q9UPQ0 1083 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 LMO7Q8WWI1 1683 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 CSB-PGBD3P0DP91 1061 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 MTX1Q13505 466 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 EAF2Q96CJ1 260 aaPredicted RBP18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 SMC3Q9UQE7 1217 aa18.88■□□□□ 0.61
ARHGEF40-203ENST00000554514 SASH1O94885 1247 aa18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 MSNP26038 577 aaKnown RBP18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 RPAP1Q9BWH6 1393 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 ERC1Q8IUD2 1116 aa18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 CABLES1Q8TDN4 633 aa18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 MYD88Q99836 296 aa18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 DDX21Q9NR30 783 aaKnown RBP eCLIP18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 XAGE3Q8WTP9 111 aa18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
ARHGEF40-203ENST00000554514 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
ARHGEF40-203ENST00000554514 ZSCAN30Q86W11 494 aa18.86■□□□□ 0.61
ARHGEF40-203ENST00000554514 IGKV5-2P06315 115 aa18.86■□□□□ 0.61
ARHGEF40-203ENST00000554514 PDIA6Q15084 440 aa18.86■□□□□ 0.61
ARHGEF40-203ENST00000554514 CCDC9Q9Y3X0 531 aaKnown RBP18.86■□□□□ 0.61
ARHGEF40-203ENST00000554514 FIBPO43427 364 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 SYT1P21579 422 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 NMIQ13287 307 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 COPS6Q7L5N1 327 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 TCEANC2Q96MN5 208 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 ERBB3P21860 1342 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 NPHP4O75161 1426 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 CHRNA2Q15822 529 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 EVI5LQ96CN4 794 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 IL17RAQ96F46 866 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 FSD1Q9BTV5 496 aa18.85■□□□□ 0.61
ARHGEF40-203ENST00000554514 STX6O43752 255 aa18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 EDC3Q96F86 508 aaKnown RBP18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 NCAPD2Q15021 1401 aa18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 NEXNQ0ZGT2 675 aa18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 COL9A3Q14050 684 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 RBM8AQ9Y5S9 174 aaKnown RBP18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 TCHHQ07283 1943 aa18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 EPB41L2O43491 1005 aaKnown RBP18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 ZSCAN22P10073 491 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 EPHA10Q5JZY3 1008 aa18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 CYP46A1Q9Y6A2 500 aa18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 NDUFB9Q9Y6M9 179 aa18.84■□□□□ 0.61
ARHGEF40-203ENST00000554514 GJB2P29033 226 aa18.83■□□□□ 0.61
ARHGEF40-203ENST00000554514 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.61
ARHGEF40-203ENST00000554514 TSPY26PQ9H489 355 aa18.83■□□□□ 0.61
ARHGEF40-203ENST00000554514 HDAC5Q9UQL6 1122 aa18.83■□□□□ 0.61
ARHGEF40-203ENST00000554514 MPNDQ8N594 471 aa18.83■□□□□ 0.6
ARHGEF40-203ENST00000554514 SYAP1Q96A49 352 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF40-203ENST00000554514 CCDC171Q6TFL3 1326 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms