RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 VWA5B2Q8N398 1253 aa9.42□□□□□ -0.9
SCFD1-211ENST00000554437 C7orf43Q8WVR3 580 aa9.42□□□□□ -0.9
SCFD1-211ENST00000554437 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
SCFD1-211ENST00000554437 GPC6Q9Y625 555 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-211ENST00000554437 H3BM21 787 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 BRD1O95696 1058 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 C16orf46Q6P387 395 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 SV2AQ7L0J3 742 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 SLC16A10Q8TF71 515 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 ZNF837Q96EG3 531 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-211ENST00000554437 MYO19Q96H55 970 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 GMCL1Q96IK5 515 aa9.41□□□□□ -0.9
SCFD1-211ENST00000554437 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-211ENST00000554437 DGKZQ13574 1117 aa9.4□□□□□ -0.9
SCFD1-211ENST00000554437 LBRQ14739 615 aaKnown RBP9.4□□□□□ -0.9
SCFD1-211ENST00000554437 COX20Q5RI15 118 aa9.4□□□□□ -0.9
SCFD1-211ENST00000554437 NLRP8Q86W28 1048 aa9.4□□□□□ -0.9
SCFD1-211ENST00000554437 KLRG1Q96E93 195 aa9.4□□□□□ -0.9
SCFD1-211ENST00000554437 SAP130Q9H0E3 1048 aa9.4□□□□□ -0.9
SCFD1-211ENST00000554437 KLK14Q9P0G3 267 aa9.4□□□□□ -0.9
SCFD1-211ENST00000554437 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
SCFD1-211ENST00000554437 THBS1P07996 1170 aa9.39□□□□□ -0.91
SCFD1-211ENST00000554437 HIF1AQ16665 826 aa9.39□□□□□ -0.91
SCFD1-211ENST00000554437 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
SCFD1-211ENST00000554437 GTPBP3Q969Y2 492 aaKnown RBP9.39□□□□□ -0.91
SCFD1-211ENST00000554437 HSH2DQ96JZ2 352 aa9.39□□□□□ -0.91
SCFD1-211ENST00000554437 SUSD3Q96L08 255 aa9.39□□□□□ -0.91
SCFD1-211ENST00000554437 LRFN2Q9ULH4 789 aa9.39□□□□□ -0.91
SCFD1-211ENST00000554437 C11orf91Q3C1V1 193 aa9.38□□□□□ -0.91
SCFD1-211ENST00000554437 FOXR1Q6PIV2 292 aa9.38□□□□□ -0.91
SCFD1-211ENST00000554437 FIGNL1Q6PIW4 674 aa9.38□□□□□ -0.91
SCFD1-211ENST00000554437 ZNF280CQ8ND82 737 aa9.38□□□□□ -0.91
SCFD1-211ENST00000554437 GTF3C2Q8WUA4 911 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-211ENST00000554437 ZCCHC2Q9C0B9 1178 aaKnown RBP9.38□□□□□ -0.91
SCFD1-211ENST00000554437 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-211ENST00000554437 ABL1P00519 1130 aa9.36□□□□□ -0.91
SCFD1-211ENST00000554437 TRERF1Q96PN7 1200 aa9.36□□□□□ -0.91
SCFD1-211ENST00000554437 GPR25O00155 361 aa9.35□□□□□ -0.91
SCFD1-211ENST00000554437 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
SCFD1-211ENST00000554437 UBAP2LQ14157 1087 aaKnown RBP9.35□□□□□ -0.91
SCFD1-211ENST00000554437 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
SCFD1-211ENST00000554437 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-211ENST00000554437 IRF7Q92985 503 aa9.35□□□□□ -0.91
SCFD1-211ENST00000554437 IFT43Q96FT9 208 aa9.35□□□□□ -0.91
SCFD1-211ENST00000554437 PCDHGC4Q9Y5F7 938 aa9.35□□□□□ -0.91
SCFD1-211ENST00000554437 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 SERPINB4P48594 390 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 KCNA1Q09470 495 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 SAMD5Q5TGI4 173 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 HELQQ8TDG4 1101 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
SCFD1-211ENST00000554437 DNMT3AQ9Y6K1 912 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-211ENST00000554437 ERBB4Q15303 1308 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 DCDC2BA2VCK2 349 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 BNIP3LO60238 219 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 VSIG8P0DPA2 414 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 BTLAQ7Z6A9 289 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 GPR161Q8N6U8 529 aaKnown RBP9.33□□□□□ -0.92
SCFD1-211ENST00000554437 ANO2Q9NQ90 1003 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 STIM2Q9P246 746 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 PHF24Q9UPV7 400 aa9.33□□□□□ -0.92
SCFD1-211ENST00000554437 KHNYNO15037 678 aaKnown RBP9.32□□□□□ -0.92
SCFD1-211ENST00000554437 ZNF211Q13398 564 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-211ENST00000554437 MTMR3Q13615 1198 aa9.32□□□□□ -0.92
SCFD1-211ENST00000554437 IER5Q5VY09 327 aa9.32□□□□□ -0.92
SCFD1-211ENST00000554437 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
SCFD1-211ENST00000554437 ABHD17AQ96GS6 310 aa9.32□□□□□ -0.92
SCFD1-211ENST00000554437 MICAL2O94851 1124 aa9.31□□□□□ -0.92
SCFD1-211ENST00000554437 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
SCFD1-211ENST00000554437 TREML1Q86YW5 311 aa9.31□□□□□ -0.92
SCFD1-211ENST00000554437 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
SCFD1-211ENST00000554437 NDFIP2Q9NV92 336 aa9.31□□□□□ -0.92
SCFD1-211ENST00000554437 ATXN7L1Q9ULK2 861 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-211ENST00000554437 PATL2C9JE40 543 aaKnown RBP9.3□□□□□ -0.92
SCFD1-211ENST00000554437 MAPTP10636 758 aaKnown RBP9.3□□□□□ -0.92
SCFD1-211ENST00000554437 IDH3AP50213 366 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
SCFD1-211ENST00000554437 TNP2Q05952 138 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 TYRO3Q06418 890 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 SF3B2Q13435 895 aaKnown RBP9.3□□□□□ -0.92
SCFD1-211ENST00000554437 FAM26DQ5JW98 314 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 ETFBKMTQ8IXQ9 262 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 ABTB2Q8N961 1025 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 BRD7Q9NPI1 651 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 EGFL7Q9UHF1 273 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 DMGDHQ9UI17 866 aaKnown RBP9.3□□□□□ -0.92
SCFD1-211ENST00000554437 GNEQ9Y223 722 aaKnown RBP9.3□□□□□ -0.92
SCFD1-211ENST00000554437 IVNS1ABPQ9Y6Y0 642 aa9.3□□□□□ -0.92
SCFD1-211ENST00000554437 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-211ENST00000554437 ZBTB39O15060 712 aa9.28□□□□□ -0.92
SCFD1-211ENST00000554437 FGFR3P22607 806 aa9.28□□□□□ -0.92
SCFD1-211ENST00000554437 MPSTP25325 297 aa9.28□□□□□ -0.92
SCFD1-211ENST00000554437 H3BRB1 525 aa9.27□□□□□ -0.93
SCFD1-211ENST00000554437 EFSO43281 561 aa9.27□□□□□ -0.93
SCFD1-211ENST00000554437 ICMTO60725 284 aa9.27□□□□□ -0.93
SCFD1-211ENST00000554437 ARSDP51689 593 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms