RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CCDC146Q8IYE0 955 aa9.9□□□□□ -0.82
LINC00640-201ENST00000554409 THUMPD2Q9BTF0 503 aaKnown RBP9.9□□□□□ -0.82
LINC00640-201ENST00000554409 MIS18AQ9NYP9 233 aa9.9□□□□□ -0.82
LINC00640-201ENST00000554409 RGL2O15211 777 aa9.89□□□□□ -0.83
LINC00640-201ENST00000554409 GIGYF1O75420 1035 aaPredicted RBP9.89□□□□□ -0.83
LINC00640-201ENST00000554409 VASPP50552 380 aaPredicted RBP9.89□□□□□ -0.83
LINC00640-201ENST00000554409 NFIXQ14938 502 aa9.89□□□□□ -0.83
LINC00640-201ENST00000554409 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
LINC00640-201ENST00000554409 ANKRD31Q8N7Z5 1873 aa9.88□□□□□ -0.83
LINC00640-201ENST00000554409 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
LINC00640-201ENST00000554409 CAMTA2O94983 1202 aa9.88□□□□□ -0.83
LINC00640-201ENST00000554409 NBPF10Q6P3W6 841 aaKnown RBP9.88□□□□□ -0.83
LINC00640-201ENST00000554409 NBPF15Q8N660 670 aa9.88□□□□□ -0.83
LINC00640-201ENST00000554409 SP7Q8TDD2 431 aaPredicted RBP9.88□□□□□ -0.83
LINC00640-201ENST00000554409 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
LINC00640-201ENST00000554409 TRIM35Q9UPQ4 493 aa9.88□□□□□ -0.83
LINC00640-201ENST00000554409 CARMIL3Q8ND23 1372 aa9.88□□□□□ -0.83
LINC00640-201ENST00000554409 ERBB4Q15303 1308 aa9.87□□□□□ -0.83
LINC00640-201ENST00000554409 NPM2Q86SE8 214 aaKnown RBP9.87□□□□□ -0.83
LINC00640-201ENST00000554409 DZIP3Q86Y13 1208 aaKnown RBP9.87□□□□□ -0.83
LINC00640-201ENST00000554409 TBC1D2BQ9UPU7 963 aa9.87□□□□□ -0.83
LINC00640-201ENST00000554409 RRP7AQ9Y3A4 280 aaKnown RBP9.87□□□□□ -0.83
LINC00640-201ENST00000554409 ZNF330Q9Y3S2 320 aaPredicted RBP9.87□□□□□ -0.83
LINC00640-201ENST00000554409 NUP98P52948 1817 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 A0A0G2JLW4 131 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 ANP32CO43423 234 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 SERPINB2P05120 415 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 DPEP1P16444 411 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 KCNA3P22001 575 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 PIP4K2AP48426 406 aaPredicted RBP9.86□□□□□ -0.83
LINC00640-201ENST00000554409 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 TBC1D9BQ66K14 1250 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 CLEC4GQ6UXB4 293 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 ARFGEF2Q9Y6D5 1785 aa9.86□□□□□ -0.83
LINC00640-201ENST00000554409 COL11A2P13942 1736 aaPredicted RBP9.85□□□□□ -0.83
LINC00640-201ENST00000554409 C19orf67A6NJJ6 358 aa9.85□□□□□ -0.83
LINC00640-201ENST00000554409 CHL1O00533 1208 aa9.85□□□□□ -0.83
LINC00640-201ENST00000554409 CCDC184Q52MB2 194 aa9.85□□□□□ -0.83
LINC00640-201ENST00000554409 ZNF652Q9Y2D9 606 aa9.85□□□□□ -0.83
LINC00640-201ENST00000554409 APAF1O14727 1248 aa9.84□□□□□ -0.83
LINC00640-201ENST00000554409 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
LINC00640-201ENST00000554409 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
LINC00640-201ENST00000554409 SETDB2Q96T68 719 aa9.84□□□□□ -0.83
LINC00640-201ENST00000554409 PIM2Q9P1W9 311 aa9.84□□□□□ -0.83
LINC00640-201ENST00000554409 ADCY9O60503 1353 aa9.84□□□□□ -0.83
LINC00640-201ENST00000554409 ANKRD36CQ5JPF3 1778 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 ATP10DQ9P241 1426 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 ERVV-1B6SEH8 477 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 HOXB7P09629 217 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 ZNF853P0CG23 659 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
LINC00640-201ENST00000554409 PRR5LQ6MZQ0 368 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 BICDL1Q6ZP65 573 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 ZNF784Q8NCA9 323 aaPredicted RBP9.83□□□□□ -0.84
LINC00640-201ENST00000554409 PDZRN3Q9UPQ7 1066 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 BCS1LQ9Y276 419 aa9.83□□□□□ -0.84
LINC00640-201ENST00000554409 MAP3K15Q6ZN16 1313 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 CHRNA5P30532 468 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
LINC00640-201ENST00000554409 PDIA6Q15084 440 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 LRP10Q7Z4F1 713 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 CNBD1Q8NA66 436 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 BRIP1Q9BX63 1249 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 MRS2Q9HD23 443 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 WWC3Q9ULE0 1092 aa9.82□□□□□ -0.84
LINC00640-201ENST00000554409 SBF1O95248 1867 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 IBTKQ9P2D0 1353 aaPredicted RBP9.81□□□□□ -0.84
LINC00640-201ENST00000554409 MYL6BP14649 208 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 PDE6BP35913 854 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 GNAI1P63096 354 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 HLFQ16534 295 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 CCDC27Q2M243 656 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 DALRD3Q5D0E6 543 aaKnown RBP9.81□□□□□ -0.84
LINC00640-201ENST00000554409 KIF6Q6ZMV9 814 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 MBIPQ9NS73 344 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 IFT57Q9NWB7 429 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 RIC1Q4ADV7 1423 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 CACNA1SQ13698 1873 aa9.81□□□□□ -0.84
LINC00640-201ENST00000554409 UTRNP46939 3433 aa9.8□□□□□ -0.84
LINC00640-201ENST00000554409 H0YIN7 160 aa9.8□□□□□ -0.84
LINC00640-201ENST00000554409 ST5P78524 1137 aa9.8□□□□□ -0.84
LINC00640-201ENST00000554409 KRT24Q2M2I5 525 aa9.8□□□□□ -0.84
LINC00640-201ENST00000554409 TTLL7Q6ZT98 887 aa9.8□□□□□ -0.84
LINC00640-201ENST00000554409 C2CD5Q86YS7 1000 aa9.8□□□□□ -0.84
LINC00640-201ENST00000554409 NIP7Q9Y221 180 aaKnown RBP eCLIP9.8□□□□□ -0.84
LINC00640-201ENST00000554409 LAS1LQ9Y4W2 734 aaKnown RBP9.8□□□□□ -0.84
LINC00640-201ENST00000554409 TNRC6CQ9HCJ0 1690 aaKnown RBP9.8□□□□□ -0.84
LINC00640-201ENST00000554409 FER1L6Q2WGJ9 1857 aa9.79□□□□□ -0.84
LINC00640-201ENST00000554409 KLRG2A4D1S0 409 aaPredicted RBP9.79□□□□□ -0.84
LINC00640-201ENST00000554409 EIF2S2P20042 333 aaKnown RBP9.79□□□□□ -0.84
LINC00640-201ENST00000554409 PROSER3Q2NL68 480 aa9.79□□□□□ -0.84
LINC00640-201ENST00000554409 TPTE2Q6XPS3 522 aa9.79□□□□□ -0.84
LINC00640-201ENST00000554409 GIGYF2Q6Y7W6 1299 aaKnown RBP9.79□□□□□ -0.84
LINC00640-201ENST00000554409 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
LINC00640-201ENST00000554409 NGEFQ8N5V2 710 aa9.79□□□□□ -0.84
LINC00640-201ENST00000554409 DDX21Q9NR30 783 aaKnown RBP eCLIP9.79□□□□□ -0.84
LINC00640-201ENST00000554409 NPHP1O15259 732 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 DUSP27Q5VZP5 1158 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 STYK1Q6J9G0 422 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms