RNA–Protein interactions for RNA: ENST00000554129.1

LINC01588-208, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2 BASIC

Gene LINC01588, Length 2,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-208ENST00000554129 TMEM63CQ9P1W3 806 aa12.94□□□□□ -0.34
LINC01588-208ENST00000554129 SCN11AQ9UI33 1791 aa12.93□□□□□ -0.34
LINC01588-208ENST00000554129 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
LINC01588-208ENST00000554129 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
LINC01588-208ENST00000554129 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
LINC01588-208ENST00000554129 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
LINC01588-208ENST00000554129 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
LINC01588-208ENST00000554129 ST18O60284 1047 aa12.92□□□□□ -0.34
LINC01588-208ENST00000554129 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
LINC01588-208ENST00000554129 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
LINC01588-208ENST00000554129 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
LINC01588-208ENST00000554129 THRAP3Q9Y2W1 955 aaKnown RBP12.92□□□□□ -0.34
LINC01588-208ENST00000554129 SYCE3A1L190 88 aa12.91□□□□□ -0.34
LINC01588-208ENST00000554129 MBD3O95983 291 aa12.91□□□□□ -0.34
LINC01588-208ENST00000554129 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
LINC01588-208ENST00000554129 DCTPP1Q9H773 170 aa12.91□□□□□ -0.34
LINC01588-208ENST00000554129 USP21Q9UK80 565 aa12.91□□□□□ -0.34
LINC01588-208ENST00000554129 SIPA1L3O60292 1781 aaPredicted RBP12.91□□□□□ -0.34
LINC01588-208ENST00000554129 EXOC5O00471 708 aa12.9□□□□□ -0.34
LINC01588-208ENST00000554129 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
LINC01588-208ENST00000554129 VPS72Q15906 364 aa12.9□□□□□ -0.34
LINC01588-208ENST00000554129 MEX3CQ5U5Q3 659 aaKnown RBP12.9□□□□□ -0.34
LINC01588-208ENST00000554129 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
LINC01588-208ENST00000554129 KDM3BQ7LBC6 1761 aa12.9□□□□□ -0.34
LINC01588-208ENST00000554129 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
LINC01588-208ENST00000554129 CABP4P57796 275 aa12.89□□□□□ -0.35
LINC01588-208ENST00000554129 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
LINC01588-208ENST00000554129 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
LINC01588-208ENST00000554129 CDCA7Q9BWT1 371 aaPredicted RBP12.89□□□□□ -0.35
LINC01588-208ENST00000554129 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
LINC01588-208ENST00000554129 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
LINC01588-208ENST00000554129 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
LINC01588-208ENST00000554129 MRC1P22897 1456 aa12.88□□□□□ -0.35
LINC01588-208ENST00000554129 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
LINC01588-208ENST00000554129 ERVV-2B6SEH9 535 aa12.88□□□□□ -0.35
LINC01588-208ENST00000554129 DDB1Q16531 1140 aa12.88□□□□□ -0.35
LINC01588-208ENST00000554129 API5Q9BZZ5 524 aaKnown RBP12.88□□□□□ -0.35
LINC01588-208ENST00000554129 AFF2P51816 1311 aa12.88□□□□□ -0.35
LINC01588-208ENST00000554129 UTP14CQ5TAP6 766 aaKnown RBP12.87□□□□□ -0.35
LINC01588-208ENST00000554129 CASC1Q6TDU7 716 aa12.87□□□□□ -0.35
LINC01588-208ENST00000554129 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
LINC01588-208ENST00000554129 SDSP20132 328 aa12.87□□□□□ -0.35
LINC01588-208ENST00000554129 C16orf71Q8IYS4 520 aaPredicted RBP12.87□□□□□ -0.35
LINC01588-208ENST00000554129 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
LINC01588-208ENST00000554129 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01588-208ENST00000554129 KAT6BQ8WYB5 2073 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 GIGYF1O75420 1035 aaPredicted RBP12.86□□□□□ -0.35
LINC01588-208ENST00000554129 REC8O95072 547 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 RNF214Q8ND24 703 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 TSPY26PQ9H489 355 aa12.86□□□□□ -0.35
LINC01588-208ENST00000554129 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
LINC01588-208ENST00000554129 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
LINC01588-208ENST00000554129 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
LINC01588-208ENST00000554129 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
LINC01588-208ENST00000554129 BRD1O95696 1058 aa12.85□□□□□ -0.35
LINC01588-208ENST00000554129 PTMAP06454 111 aaKnown RBP12.85□□□□□ -0.35
LINC01588-208ENST00000554129 GTF2F1P35269 517 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01588-208ENST00000554129 DMTNQ08495 405 aa12.85□□□□□ -0.35
LINC01588-208ENST00000554129 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
LINC01588-208ENST00000554129 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.84□□□□□ -0.35
LINC01588-208ENST00000554129 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
LINC01588-208ENST00000554129 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 CCDC30Q5VVM6 783 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
LINC01588-208ENST00000554129 ARID3AQ99856 593 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 HOXB7P09629 217 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
LINC01588-208ENST00000554129 G2E3Q7L622 706 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 OTUD7AQ8TE49 926 aaPredicted RBP12.84□□□□□ -0.35
LINC01588-208ENST00000554129 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
LINC01588-208ENST00000554129 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
LINC01588-208ENST00000554129 TCHHQ07283 1943 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 ERC2O15083 957 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
LINC01588-208ENST00000554129 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 PIBF1Q8WXW3 757 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 PIGBQ92521 554 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 TMX3Q96JJ7 454 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 MCM2P49736 904 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 UVSSAQ2YD98 709 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
LINC01588-208ENST00000554129 TMOD3Q9NYL9 352 aa12.83□□□□□ -0.36
LINC01588-208ENST00000554129 CUL4AQ13619 759 aa12.82□□□□□ -0.36
LINC01588-208ENST00000554129 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
LINC01588-208ENST00000554129 STK31Q9BXU1 1019 aa12.82□□□□□ -0.36
LINC01588-208ENST00000554129 PRDM10Q9NQV6 1147 aa12.82□□□□□ -0.36
LINC01588-208ENST00000554129 EP400Q96L91 3159 aa12.82□□□□□ -0.36
LINC01588-208ENST00000554129 PHF14O94880 888 aa12.82□□□□□ -0.36
LINC01588-208ENST00000554129 DNTTIP2Q5QJE6 756 aaKnown RBP12.82□□□□□ -0.36
LINC01588-208ENST00000554129 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
LINC01588-208ENST00000554129 TRPC5Q9UL62 973 aaPredicted RBP12.82□□□□□ -0.36
LINC01588-208ENST00000554129 GLI3P10071 1580 aa12.81□□□□□ -0.36
LINC01588-208ENST00000554129 A0A0G2JS52 829 aa12.81□□□□□ -0.36
LINC01588-208ENST00000554129 NOLC1Q14978 699 aaKnown RBP eCLIP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms