RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 ZNF330Q9Y3S2 320 aaPredicted RBP15.58■□□□□ 0.08
TUBB3-204ENST00000554116 DDNO94850 711 aaPredicted RBP15.57■□□□□ 0.08
TUBB3-204ENST00000554116 CNGB1Q14028 1251 aaPredicted RBP15.57■□□□□ 0.08
TUBB3-204ENST00000554116 ERFEQ4G0M1 354 aa15.57■□□□□ 0.08
TUBB3-204ENST00000554116 PRPF40BQ6NWY9 871 aaKnown RBP15.57■□□□□ 0.08
TUBB3-204ENST00000554116 PDZRN3Q9UPQ7 1066 aa15.57■□□□□ 0.08
TUBB3-204ENST00000554116 KLRG2A4D1S0 409 aaPredicted RBP15.56■□□□□ 0.08
TUBB3-204ENST00000554116 STYK1Q6J9G0 422 aa15.56■□□□□ 0.08
TUBB3-204ENST00000554116 CNBD1Q8NA66 436 aa15.56■□□□□ 0.08
TUBB3-204ENST00000554116 SETDB2Q96T68 719 aa15.56■□□□□ 0.08
TUBB3-204ENST00000554116 BTBD11A6QL63 1104 aa15.55■□□□□ 0.08
TUBB3-204ENST00000554116 NBPF26B4DH59 902 aa15.55■□□□□ 0.08
TUBB3-204ENST00000554116 PRKAR2BP31323 418 aa15.55■□□□□ 0.08
TUBB3-204ENST00000554116 DPY19L2Q6NUT2 758 aa15.55■□□□□ 0.08
TUBB3-204ENST00000554116 NBPF10Q6P3W6 841 aaKnown RBP15.55■□□□□ 0.08
TUBB3-204ENST00000554116 OLFM4Q6UX06 510 aa15.55■□□□□ 0.08
TUBB3-204ENST00000554116 DZIP3Q86Y13 1208 aaKnown RBP15.55■□□□□ 0.08
TUBB3-204ENST00000554116 NBPF15Q8N660 670 aa15.55■□□□□ 0.08
TUBB3-204ENST00000554116 TAOK3Q9H2K8 898 aa15.54■□□□□ 0.08
TUBB3-204ENST00000554116 CHADLQ6NUI6 762 aa15.53■□□□□ 0.08
TUBB3-204ENST00000554116 MCM10Q7L590 875 aa15.53■□□□□ 0.08
TUBB3-204ENST00000554116 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
TUBB3-204ENST00000554116 MASTLQ96GX5 879 aa15.53■□□□□ 0.08
TUBB3-204ENST00000554116 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
TUBB3-204ENST00000554116 SNED1Q8TER0 1413 aa15.52■□□□□ 0.08
TUBB3-204ENST00000554116 SCN4AP35499 1836 aa15.52■□□□□ 0.08
TUBB3-204ENST00000554116 ADAMTSL1Q8N6G6 1762 aa15.52■□□□□ 0.08
TUBB3-204ENST00000554116 PASKQ96RG2 1323 aa15.52■□□□□ 0.08
TUBB3-204ENST00000554116 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
TUBB3-204ENST00000554116 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
TUBB3-204ENST00000554116 HLFQ16534 295 aa15.51■□□□□ 0.07
TUBB3-204ENST00000554116 L3MBTL3Q96JM7 780 aaPredicted RBP15.51■□□□□ 0.07
TUBB3-204ENST00000554116 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
TUBB3-204ENST00000554116 ST5P78524 1137 aa15.5■□□□□ 0.07
TUBB3-204ENST00000554116 TAF1DQ9H5J8 278 aaPredicted RBP15.5■□□□□ 0.07
TUBB3-204ENST00000554116 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
TUBB3-204ENST00000554116 COL4A5P29400 1685 aa15.5■□□□□ 0.07
TUBB3-204ENST00000554116 ZNF541Q9H0D2 1346 aa15.49■□□□□ 0.07
TUBB3-204ENST00000554116 SNRPA1P09661 255 aaKnown RBP15.49■□□□□ 0.07
TUBB3-204ENST00000554116 NPR1P16066 1061 aa15.49■□□□□ 0.07
TUBB3-204ENST00000554116 SLC51AQ86UW1 340 aa15.49■□□□□ 0.07
TUBB3-204ENST00000554116 NBPF5PQ86XG9 351 aaPredicted RBP15.49■□□□□ 0.07
TUBB3-204ENST00000554116 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
TUBB3-204ENST00000554116 NUP98P52948 1817 aa15.48■□□□□ 0.07
TUBB3-204ENST00000554116 PPP2R1AP30153 589 aa15.48■□□□□ 0.07
TUBB3-204ENST00000554116 PRDM10Q9NQV6 1147 aa15.48■□□□□ 0.07
TUBB3-204ENST00000554116 ZNF277Q9NRM2 450 aaPredicted RBP15.48■□□□□ 0.07
TUBB3-204ENST00000554116 MIS18AQ9NYP9 233 aa15.48■□□□□ 0.07
TUBB3-204ENST00000554116 FKBP4Q02790 459 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■■■■□ 22.8
TUBB3-204ENST00000554116 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
TUBB3-204ENST00000554116 NIP7Q9Y221 180 aaKnown RBP eCLIP15.47■□□□□ 0.07
TUBB3-204ENST00000554116 CNTNAP1P78357 1384 aa15.47■□□□□ 0.07
TUBB3-204ENST00000554116 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
TUBB3-204ENST00000554116 RGL2O15211 777 aa15.46■□□□□ 0.07
TUBB3-204ENST00000554116 FOXN1O15353 648 aa15.46■□□□□ 0.07
TUBB3-204ENST00000554116 SOGA3Q5TF21 947 aa15.46■□□□□ 0.07
TUBB3-204ENST00000554116 LDHDQ86WU2 507 aa15.46■□□□□ 0.07
TUBB3-204ENST00000554116 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
TUBB3-204ENST00000554116 KDM3BQ7LBC6 1761 aa15.46■□□□□ 0.07
TUBB3-204ENST00000554116 ABCC12Q96J65 1359 aa15.46■□□□□ 0.07
TUBB3-204ENST00000554116 LTBP1Q14766 1721 aa15.46■□□□□ 0.06
TUBB3-204ENST00000554116 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
TUBB3-204ENST00000554116 FZD9O00144 591 aa15.45■□□□□ 0.06
TUBB3-204ENST00000554116 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
TUBB3-204ENST00000554116 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
TUBB3-204ENST00000554116 TPTE2Q6XPS3 522 aa15.45■□□□□ 0.06
TUBB3-204ENST00000554116 IQCA1LA6NCM1 817 aa15.44■□□□□ 0.06
TUBB3-204ENST00000554116 NPHP1O15259 732 aa15.44■□□□□ 0.06
TUBB3-204ENST00000554116 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
TUBB3-204ENST00000554116 CTCFP49711 727 aaPredicted RBP15.44■□□□□ 0.06
TUBB3-204ENST00000554116 VEGFBP49765 207 aa15.44■□□□□ 0.06
TUBB3-204ENST00000554116 CRY2Q49AN0 593 aa15.44■□□□□ 0.06
TUBB3-204ENST00000554116 NPM2Q86SE8 214 aaKnown RBP15.44■□□□□ 0.06
TUBB3-204ENST00000554116 SLC34A2O95436 690 aa15.43■□□□□ 0.06
TUBB3-204ENST00000554116 TAF7Q15545 349 aaPredicted RBP15.43■□□□□ 0.06
TUBB3-204ENST00000554116 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
TUBB3-204ENST00000554116 SYNE4Q8N205 404 aa15.43■□□□□ 0.06
TUBB3-204ENST00000554116 CFAP53Q96M91 514 aa15.43■□□□□ 0.06
TUBB3-204ENST00000554116 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
TUBB3-204ENST00000554116 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
TUBB3-204ENST00000554116 RTF1Q92541 710 aaKnown RBP15.42■□□□□ 0.06
TUBB3-204ENST00000554116 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
TUBB3-204ENST00000554116 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
TUBB3-204ENST00000554116 EPHX2P34913 555 aa15.41■□□□□ 0.06
TUBB3-204ENST00000554116 IARSP41252 1262 aaKnown RBP15.41■□□□□ 0.06
TUBB3-204ENST00000554116 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
TUBB3-204ENST00000554116 PLEKHF1Q96S99 279 aa15.41■□□□□ 0.06
TUBB3-204ENST00000554116 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
TUBB3-204ENST00000554116 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
TUBB3-204ENST00000554116 TMEM88BA6NKF7 163 aa15.4■□□□□ 0.06
TUBB3-204ENST00000554116 EIF4A1P60842 406 aaKnown RBP15.4■□□□□ 0.06
TUBB3-204ENST00000554116 FMR1Q06787 632 aaKnown RBP eCLIP15.4■□□□□ 0.06
TUBB3-204ENST00000554116 EAPPQ56P03 285 aaPredicted RBP15.4■□□□□ 0.06
TUBB3-204ENST00000554116 MAP1SQ66K74 1059 aaPredicted RBP15.4■□□□□ 0.06
TUBB3-204ENST00000554116 C3orf67Q6ZVT6 689 aa15.4■□□□□ 0.06
TUBB3-204ENST00000554116 PSMD1Q99460 953 aa15.4■□□□□ 0.06
TUBB3-204ENST00000554116 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
TUBB3-204ENST00000554116 ALDH1B1P30837 517 aa15.39■□□□□ 0.05
TUBB3-204ENST00000554116 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
TUBB3-204ENST00000554116 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms