RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NLRP8Q86W28 1048 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 ZNF295-AS1Q8N0V1 137 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 C1orf216Q8TAB5 229 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 AIDAQ96BJ3 306 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 SERTAD1Q9UHV2 236 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 HCN2Q9UL51 889 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 TTBK1Q5TCY1 1321 aaPredicted RBP5.69□□□□□ -1.5
SLIRP-202ENST00000553981 NEURL1BA8MQ27 555 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 ATXN7O15265 892 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-202ENST00000553981 BAG6P46379 1132 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 SEMA3FQ13275 785 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 GRIN2CQ14957 1233 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 TPRNQ4KMQ1 711 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 BTBD6Q96KE9 485 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 SLC4A9Q96Q91 983 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 IQSEC3Q9UPP2 1182 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-202ENST00000553981 USP3Q9Y6I4 520 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 DISP1Q96F81 1524 aa5.68□□□□□ -1.5
SLIRP-202ENST00000553981 ASXL2Q76L83 1435 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 CUL7Q14999 1698 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 ADGRL1O94910 1474 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 A0A1W2PNR3 127 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 GNB5O14775 395 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 MAPTP10636 758 aaKnown RBP5.67□□□□□ -1.5
SLIRP-202ENST00000553981 DGKGP49619 791 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 TNP2Q05952 138 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 MTFR1Q15390 333 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 KLF15Q9UIH9 416 aa5.67□□□□□ -1.5
SLIRP-202ENST00000553981 PTPRGP23470 1445 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 DCDC2BA2VCK2 349 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 A6NJY4 79 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 K7ELQ4 463 aaPredicted RBP5.66□□□□□ -1.5
SLIRP-202ENST00000553981 PIK3CDO00329 1044 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 CDK2AP1O14519 115 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 CD33P20138 364 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 SOX11P35716 441 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 NBPF1Q3BBV0 1214 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 ARSJQ5FYB0 599 aaPredicted RBP5.66□□□□□ -1.5
SLIRP-202ENST00000553981 FAM182BQ5T319 152 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 ZIC5Q96T25 663 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 PCDHGA11Q9Y5H2 935 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 GLI2P10070 1586 aa5.66□□□□□ -1.5
SLIRP-202ENST00000553981 EPRSP07814 1512 aaKnown RBP5.65□□□□□ -1.5
SLIRP-202ENST00000553981 HECW2Q9P2P5 1572 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 PIK3R2O00459 728 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 KHNYNO15037 678 aaKnown RBP5.65□□□□□ -1.5
SLIRP-202ENST00000553981 ADH6P28332 368 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 MCM6Q14566 821 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 XP32Q5T750 250 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 FCHSD1Q86WN1 690 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 ZDHHC3Q9NYG2 299 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 CABP1Q9NZU7 370 aa5.65□□□□□ -1.5
SLIRP-202ENST00000553981 CARMIL1Q5VZK9 1371 aa5.65□□□□□ -1.51
SLIRP-202ENST00000553981 MAP3K4Q9Y6R4 1608 aa5.64□□□□□ -1.51
SLIRP-202ENST00000553981 FURINP09958 794 aa5.64□□□□□ -1.51
SLIRP-202ENST00000553981 FAM157BP0CG42 384 aa5.64□□□□□ -1.51
SLIRP-202ENST00000553981 TATP17735 454 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-202ENST00000553981 CHSY3Q70JA7 882 aa5.64□□□□□ -1.51
SLIRP-202ENST00000553981 AVENQ9NQS1 362 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-202ENST00000553981 TNIKQ9UKE5 1360 aa5.64□□□□□ -1.51
SLIRP-202ENST00000553981 UHRF1BP1LA0JNW5 1464 aa5.64□□□□□ -1.51
SLIRP-202ENST00000553981 KDM5BQ9UGL1 1544 aa5.64□□□□□ -1.51
SLIRP-202ENST00000553981 ZCCHC11Q5TAX3 1644 aaKnown RBP5.63□□□□□ -1.51
SLIRP-202ENST00000553981 C1QTNF9BB2RNN3 333 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 TXLNAP40222 546 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 EML3Q32P44 896 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 CD163Q86VB7 1156 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 STRN4Q9NRL3 753 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 COG6Q9Y2V7 657 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 PARP3Q9Y6F1 533 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 KIF27Q86VH2 1401 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 UACAQ9BZF9 1416 aa5.63□□□□□ -1.51
SLIRP-202ENST00000553981 EFSO43281 561 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 SKIP12755 728 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 CHRNA4P43681 627 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 PCBP4P57723 403 aaKnown RBP5.62□□□□□ -1.51
SLIRP-202ENST00000553981 GTF2IP78347 998 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 SAMD5Q5TGI4 173 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 ZNF468Q5VIY5 522 aaPredicted RBP5.62□□□□□ -1.51
SLIRP-202ENST00000553981 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
SLIRP-202ENST00000553981 ZDHHC1Q8WTX9 485 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 NOP53Q9NZM5 478 aaKnown RBP5.62□□□□□ -1.51
SLIRP-202ENST00000553981 SCHIP1Q9P0W5 487 aaPredicted RBP5.62□□□□□ -1.51
SLIRP-202ENST00000553981 GJA3Q9Y6H8 435 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 IQGAP2Q13576 1575 aa5.62□□□□□ -1.51
SLIRP-202ENST00000553981 BACH1O14867 736 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 KIAA0556O60303 1618 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 PLB1Q6P1J6 1458 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 BICDL1Q6ZP65 573 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 TRIM11Q96F44 468 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 ALG2Q9H553 416 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 ZNF358Q9NW07 568 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 UGGT2Q9NYU1 1516 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 MARK1Q9P0L2 795 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 PRR12Q9ULL5 1215 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 NOD1Q9Y239 953 aa5.61□□□□□ -1.51
SLIRP-202ENST00000553981 LZTS3O60299 673 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-202ENST00000553981 EPHA4P54764 986 aa5.6□□□□□ -1.51
SLIRP-202ENST00000553981 LAMC2Q13753 1193 aa5.6□□□□□ -1.51
SLIRP-202ENST00000553981 NCOA4Q13772 614 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 260.3 ms