RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 GTF2E1P29083 439 aaPredicted RBP12.64□□□□□ -0.39
PCNX4-207ENST00000553898 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
PCNX4-207ENST00000553898 MAP3K15Q6ZN16 1313 aa12.63□□□□□ -0.39
PCNX4-207ENST00000553898 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
PCNX4-207ENST00000553898 CLEC4GQ6UXB4 293 aa12.63□□□□□ -0.39
PCNX4-207ENST00000553898 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
PCNX4-207ENST00000553898 TSPYL6Q8N831 410 aa12.63□□□□□ -0.39
PCNX4-207ENST00000553898 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
PCNX4-207ENST00000553898 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCNX4-207ENST00000553898 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 TCERG1O14776 1098 aaKnown RBP12.62□□□□□ -0.39
PCNX4-207ENST00000553898 PROSER3Q2NL68 480 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
PCNX4-207ENST00000553898 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
PCNX4-207ENST00000553898 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
PCNX4-207ENST00000553898 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
PCNX4-207ENST00000553898 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
PCNX4-207ENST00000553898 ST5P78524 1137 aa12.61□□□□□ -0.39
PCNX4-207ENST00000553898 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
PCNX4-207ENST00000553898 NFIXQ14938 502 aa12.61□□□□□ -0.39
PCNX4-207ENST00000553898 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
PCNX4-207ENST00000553898 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
PCNX4-207ENST00000553898 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
PCNX4-207ENST00000553898 RGL2O15211 777 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 SERPINB2P05120 415 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 GPTP24298 496 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 PDIA6Q15084 440 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 CDCA7LQ96GN5 454 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 NYXQ9GZU5 481 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 CD2APQ9Y5K6 639 aa12.6□□□□□ -0.39
PCNX4-207ENST00000553898 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
PCNX4-207ENST00000553898 TM4SF1P30408 202 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 NEXNQ0ZGT2 675 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 FKBP5Q13451 457 aaPredicted RBP12.59□□□□□ -0.39
PCNX4-207ENST00000553898 HLFQ16534 295 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
PCNX4-207ENST00000553898 PPP1R42Q7Z4L9 355 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 PLBD2Q8NHP8 589 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 YTHDC1Q96MU7 727 aaKnown RBP12.59□□□□□ -0.39
PCNX4-207ENST00000553898 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
PCNX4-207ENST00000553898 VAMP4O75379 141 aa12.58□□□□□ -0.4
PCNX4-207ENST00000553898 DDR1Q08345 913 aa12.58□□□□□ -0.4
PCNX4-207ENST00000553898 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
PCNX4-207ENST00000553898 SYT17Q9BSW7 474 aa12.58□□□□□ -0.4
PCNX4-207ENST00000553898 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
PCNX4-207ENST00000553898 GPR162Q16538 588 aa12.57□□□□□ -0.4
PCNX4-207ENST00000553898 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
PCNX4-207ENST00000553898 NUP98P52948 1817 aa12.57□□□□□ -0.4
PCNX4-207ENST00000553898 ATP10DQ9P241 1426 aa12.56□□□□□ -0.4
PCNX4-207ENST00000553898 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
PCNX4-207ENST00000553898 PDE6BP35913 854 aa12.56□□□□□ -0.4
PCNX4-207ENST00000553898 FLIIQ13045 1269 aa12.56□□□□□ -0.4
PCNX4-207ENST00000553898 SMC4Q9NTJ3 1288 aa12.56□□□□□ -0.4
PCNX4-207ENST00000553898 H0YIN7 160 aa12.55□□□□□ -0.4
PCNX4-207ENST00000553898 KCNA4P22459 653 aa12.55□□□□□ -0.4
PCNX4-207ENST00000553898 TGFB2P61812 414 aa12.55□□□□□ -0.4
PCNX4-207ENST00000553898 TCIRG1Q13488 830 aa12.55□□□□□ -0.4
PCNX4-207ENST00000553898 MYD88Q99836 296 aa12.55□□□□□ -0.4
PCNX4-207ENST00000553898 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
PCNX4-207ENST00000553898 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
PCNX4-207ENST00000553898 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
PCNX4-207ENST00000553898 C10orf71Q711Q0 1435 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 CACNA1FO60840 1977 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 ARFGEF2Q9Y6D5 1785 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
PCNX4-207ENST00000553898 PI4KAP2A4QPH2 592 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 LRP10Q7Z4F1 713 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 C2CD5Q86YS7 1000 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 PI4KAP1Q8N8J0 262 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 BCL2L13Q9BXK5 485 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 PDZRN3Q9UPQ7 1066 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
PCNX4-207ENST00000553898 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
PCNX4-207ENST00000553898 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
PCNX4-207ENST00000553898 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
PCNX4-207ENST00000553898 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
PCNX4-207ENST00000553898 ALDH1L2Q3SY69 923 aa12.53□□□□□ -0.4
PCNX4-207ENST00000553898 SLC4A10Q6U841 1118 aa12.53□□□□□ -0.4
PCNX4-207ENST00000553898 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
PCNX4-207ENST00000553898 ZNF622Q969S3 477 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCNX4-207ENST00000553898 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
PCNX4-207ENST00000553898 SUSD4Q5VX71 490 aa12.52□□□□□ -0.41
PCNX4-207ENST00000553898 G2E3Q7L622 706 aa12.52□□□□□ -0.41
PCNX4-207ENST00000553898 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.41
PCNX4-207ENST00000553898 TRMT2AQ8IZ69 625 aaKnown RBP12.52□□□□□ -0.41
PCNX4-207ENST00000553898 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms