RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 NFE2L2Q16236 605 aa10.88□□□□□ -0.67
RDH11-205ENST00000553816 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
RDH11-205ENST00000553816 SPON1Q9HCB6 807 aa10.88□□□□□ -0.67
RDH11-205ENST00000553816 DNAJC10Q8IXB1 793 aa10.87□□□□□ -0.67
RDH11-205ENST00000553816 AK7Q96M32 723 aa10.87□□□□□ -0.67
RDH11-205ENST00000553816 THUMPD2Q9BTF0 503 aaKnown RBP10.87□□□□□ -0.67
RDH11-205ENST00000553816 SRCAPQ6ZRS2 3230 aa10.86□□□□□ -0.67
RDH11-205ENST00000553816 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
RDH11-205ENST00000553816 GNPATO15228 680 aa10.86□□□□□ -0.67
RDH11-205ENST00000553816 HTATSF1O43719 755 aaKnown RBP10.86□□□□□ -0.67
RDH11-205ENST00000553816 PHF14O94880 888 aa10.86□□□□□ -0.67
RDH11-205ENST00000553816 ZNF790Q6PG37 636 aa10.86□□□□□ -0.67
RDH11-205ENST00000553816 RTF1Q92541 710 aaKnown RBP10.86□□□□□ -0.67
RDH11-205ENST00000553816 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
RDH11-205ENST00000553816 MTFR1LQ9H019 292 aa10.86□□□□□ -0.67
RDH11-205ENST00000553816 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
RDH11-205ENST00000553816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
RDH11-205ENST00000553816 BTBD11A6QL63 1104 aa10.85□□□□□ -0.67
RDH11-205ENST00000553816 RIMBP2O15034 1052 aa10.85□□□□□ -0.67
RDH11-205ENST00000553816 ANP32CO43423 234 aa10.85□□□□□ -0.67
RDH11-205ENST00000553816 TMPOP42166 694 aaKnown RBP10.85□□□□□ -0.67
RDH11-205ENST00000553816 WDR43Q15061 677 aaKnown RBP eCLIP10.85□□□□□ -0.67
RDH11-205ENST00000553816 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
RDH11-205ENST00000553816 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
RDH11-205ENST00000553816 PNNQ9H307 717 aaKnown RBP10.85□□□□□ -0.67
RDH11-205ENST00000553816 MIS18AQ9NYP9 233 aa10.85□□□□□ -0.67
RDH11-205ENST00000553816 LAMB4A4D0S4 1761 aa10.85□□□□□ -0.67
RDH11-205ENST00000553816 CNTNAP4Q9C0A0 1308 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 NEFMP07197 916 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 CYP19A1P11511 503 aaPredicted RBP10.84□□□□□ -0.67
RDH11-205ENST00000553816 CRKLP46109 303 aaKnown RBP10.84□□□□□ -0.67
RDH11-205ENST00000553816 RIPK4P57078 832 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 MSL1Q68DK7 614 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 INTS5Q6P9B9 1019 aaKnown RBP10.84□□□□□ -0.67
RDH11-205ENST00000553816 SLC16A10Q8TF71 515 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 RUNDC1Q96C34 613 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 HEG1Q9ULI3 1381 aa10.84□□□□□ -0.67
RDH11-205ENST00000553816 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
RDH11-205ENST00000553816 SSFA2P28290 1259 aa10.83□□□□□ -0.68
RDH11-205ENST00000553816 TAF7Q15545 349 aaPredicted RBP10.83□□□□□ -0.68
RDH11-205ENST00000553816 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
RDH11-205ENST00000553816 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
RDH11-205ENST00000553816 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
RDH11-205ENST00000553816 RPS6KA4O75676 772 aa10.82□□□□□ -0.68
RDH11-205ENST00000553816 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
RDH11-205ENST00000553816 FLAD1Q8NFF5 587 aa10.82□□□□□ -0.68
RDH11-205ENST00000553816 PNISRQ8TF01 805 aaKnown RBP10.82□□□□□ -0.68
RDH11-205ENST00000553816 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
RDH11-205ENST00000553816 ZBTB1Q9Y2K1 713 aa10.82□□□□□ -0.68
RDH11-205ENST00000553816 RTCBQ9Y3I0 505 aaKnown RBP10.82□□□□□ -0.68
RDH11-205ENST00000553816 APAF1O14727 1248 aa10.81□□□□□ -0.68
RDH11-205ENST00000553816 FMNL2Q96PY5 1086 aa10.81□□□□□ -0.68
RDH11-205ENST00000553816 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
RDH11-205ENST00000553816 CCDC87Q9NVE4 849 aa10.81□□□□□ -0.68
RDH11-205ENST00000553816 PPP1R1BQ9UD71 204 aaPredicted RBP10.81□□□□□ -0.68
RDH11-205ENST00000553816 USP16Q9Y5T5 823 aa10.81□□□□□ -0.68
RDH11-205ENST00000553816 HMGB2P26583 209 aaKnown RBP10.8□□□□□ -0.68
RDH11-205ENST00000553816 TRAPPC3LQ5T215 181 aa10.8□□□□□ -0.68
RDH11-205ENST00000553816 ARXQ96QS3 562 aa10.8□□□□□ -0.68
RDH11-205ENST00000553816 FHDC1Q9C0D6 1143 aaPredicted RBP10.8□□□□□ -0.68
RDH11-205ENST00000553816 SRP68Q9UHB9 627 aaKnown RBP10.8□□□□□ -0.68
RDH11-205ENST00000553816 SOS1Q07889 1333 aaPredicted RBP10.8□□□□□ -0.68
RDH11-205ENST00000553816 BCORQ6W2J9 1755 aa10.8□□□□□ -0.68
RDH11-205ENST00000553816 AFDNP55196 1824 aaKnown RBP10.79□□□□□ -0.68
RDH11-205ENST00000553816 A1BGP04217 495 aa10.79□□□□□ -0.68
RDH11-205ENST00000553816 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
RDH11-205ENST00000553816 PIP4K2AP48426 406 aaPredicted RBP10.79□□□□□ -0.68
RDH11-205ENST00000553816 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
RDH11-205ENST00000553816 SCN7AQ01118 1682 aa10.79□□□□□ -0.68
RDH11-205ENST00000553816 COL15A1P39059 1388 aa10.78□□□□□ -0.68
RDH11-205ENST00000553816 KIAA1551Q9HCM1 1747 aa10.78□□□□□ -0.68
RDH11-205ENST00000553816 GYS1P13807 737 aa10.78□□□□□ -0.68
RDH11-205ENST00000553816 EIF4A1P60842 406 aaKnown RBP10.78□□□□□ -0.68
RDH11-205ENST00000553816 MS4A4AQ96JQ5 239 aa10.78□□□□□ -0.68
RDH11-205ENST00000553816 SYT17Q9BSW7 474 aa10.78□□□□□ -0.68
RDH11-205ENST00000553816 KIF13BQ9NQT8 1826 aa10.78□□□□□ -0.68
RDH11-205ENST00000553816 N4BP2Q86UW6 1770 aaPredicted RBP10.77□□□□□ -0.68
RDH11-205ENST00000553816 STARD3NLO95772 234 aa10.77□□□□□ -0.69
RDH11-205ENST00000553816 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
RDH11-205ENST00000553816 POLD1P28340 1107 aa10.77□□□□□ -0.69
RDH11-205ENST00000553816 RFC4P35249 363 aa10.77□□□□□ -0.69
RDH11-205ENST00000553816 USP42Q9H9J4 1324 aaKnown RBP10.77□□□□□ -0.69
RDH11-205ENST00000553816 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
RDH11-205ENST00000553816 GIGYF1O75420 1035 aaPredicted RBP10.76□□□□□ -0.69
RDH11-205ENST00000553816 EIF5P55010 431 aaKnown RBP10.76□□□□□ -0.69
RDH11-205ENST00000553816 LMOD3Q0VAK6 560 aa10.76□□□□□ -0.69
RDH11-205ENST00000553816 KRT24Q2M2I5 525 aa10.76□□□□□ -0.69
RDH11-205ENST00000553816 ARSIQ5FYB1 569 aa10.76□□□□□ -0.69
RDH11-205ENST00000553816 NBPF10Q6P3W6 841 aaKnown RBP10.76□□□□□ -0.69
RDH11-205ENST00000553816 NBPF15Q8N660 670 aa10.76□□□□□ -0.69
RDH11-205ENST00000553816 KHSRPQ92945 711 aaKnown RBP eCLIP10.76□□□□□ -0.69
RDH11-205ENST00000553816 TEX13AQ9BXU3 409 aaPredicted RBP10.76□□□□□ -0.69
RDH11-205ENST00000553816 BCL2L12Q9HB09 334 aa10.76□□□□□ -0.69
RDH11-205ENST00000553816 TSPYL4Q9UJ04 414 aa10.76□□□□□ -0.69
RDH11-205ENST00000553816 NRXN2Q9P2S2 1712 aa10.75□□□□□ -0.69
RDH11-205ENST00000553816 NUP98P52948 1817 aa10.75□□□□□ -0.69
RDH11-205ENST00000553816 USPL1Q5W0Q7 1092 aa10.75□□□□□ -0.69
RDH11-205ENST00000553816 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms