RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 TBC1D9BQ66K14 1250 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 CLEC4GQ6UXB4 293 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 KIF6Q6ZMV9 814 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 NLGN2Q8NFZ4 835 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
TMEM253-202ENST00000553744 DDX21Q9NR30 783 aaKnown RBP eCLIP15.37■□□□□ 0.05
TMEM253-202ENST00000553744 CHPF2Q9P2E5 772 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 KIF13BQ9NQT8 1826 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 MAP3K15Q6ZN16 1313 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 NRXN2Q9P2S2 1712 aa15.37■□□□□ 0.05
TMEM253-202ENST00000553744 BICDL1Q6ZP65 573 aa15.36■□□□□ 0.05
TMEM253-202ENST00000553744 TSPYL6Q8N831 410 aa15.36■□□□□ 0.05
TMEM253-202ENST00000553744 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
TMEM253-202ENST00000553744 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
TMEM253-202ENST00000553744 ERVV-1B6SEH8 477 aa15.35■□□□□ 0.05
TMEM253-202ENST00000553744 DBF4Q9UBU7 674 aaPredicted RBP15.35■□□□□ 0.05
TMEM253-202ENST00000553744 AFDNP55196 1824 aaKnown RBP15.34■□□□□ 0.05
TMEM253-202ENST00000553744 SERPINB2P05120 415 aa15.34■□□□□ 0.05
TMEM253-202ENST00000553744 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
TMEM253-202ENST00000553744 HLFQ16534 295 aa15.34■□□□□ 0.05
TMEM253-202ENST00000553744 TWISTNBQ3B726 338 aaPredicted RBP15.34■□□□□ 0.05
TMEM253-202ENST00000553744 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
TMEM253-202ENST00000553744 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
TMEM253-202ENST00000553744 ZBTB3Q9H5J0 574 aa15.34■□□□□ 0.05
TMEM253-202ENST00000553744 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
TMEM253-202ENST00000553744 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.05
TMEM253-202ENST00000553744 CCDC30Q5VVM6 783 aa15.33■□□□□ 0.04
TMEM253-202ENST00000553744 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
TMEM253-202ENST00000553744 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
TMEM253-202ENST00000553744 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
TMEM253-202ENST00000553744 KIAA1551Q9HCM1 1747 aa15.33■□□□□ 0.04
TMEM253-202ENST00000553744 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
TMEM253-202ENST00000553744 NIP7Q9Y221 180 aaKnown RBP eCLIP15.32■□□□□ 0.04
TMEM253-202ENST00000553744 E9PSI1 815 aa15.31■□□□□ 0.04
TMEM253-202ENST00000553744 TGFB2P61812 414 aa15.31■□□□□ 0.04
TMEM253-202ENST00000553744 AIMP1Q12904 312 aaKnown RBP15.31■□□□□ 0.04
TMEM253-202ENST00000553744 GIGYF2Q6Y7W6 1299 aaKnown RBP15.31■□□□□ 0.04
TMEM253-202ENST00000553744 NUP98P52948 1817 aa15.31■□□□□ 0.04
TMEM253-202ENST00000553744 PRR5LQ6MZQ0 368 aa15.3■□□□□ 0.04
TMEM253-202ENST00000553744 VAMP4O75379 141 aa15.29■□□□□ 0.04
TMEM253-202ENST00000553744 SLFN5Q08AF3 891 aa15.29■□□□□ 0.04
TMEM253-202ENST00000553744 CNBD1Q8NA66 436 aa15.29■□□□□ 0.04
TMEM253-202ENST00000553744 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
TMEM253-202ENST00000553744 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
TMEM253-202ENST00000553744 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
TMEM253-202ENST00000553744 UBN2Q6ZU65 1347 aa15.28■□□□□ 0.04
TMEM253-202ENST00000553744 CHD4Q14839 1912 aa15.28■□□□□ 0.04
TMEM253-202ENST00000553744 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
TMEM253-202ENST00000553744 ZNF34Q8IZ26 560 aa15.28■□□□□ 0.04
TMEM253-202ENST00000553744 PLBD2Q8NHP8 589 aa15.28■□□□□ 0.04
TMEM253-202ENST00000553744 PHAXQ9H814 394 aaKnown RBP15.28■□□□□ 0.04
TMEM253-202ENST00000553744 ANKRD36CQ5JPF3 1778 aa15.28■□□□□ 0.04
TMEM253-202ENST00000553744 A0A0G2JLW4 131 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 TCERG1O14776 1098 aaKnown RBP15.27■□□□□ 0.04
TMEM253-202ENST00000553744 NPHP1O15259 732 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 DPEP1P16444 411 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 GPTP24298 496 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 ST5P78524 1137 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
TMEM253-202ENST00000553744 ANKRD31Q8N7Z5 1873 aa15.27■□□□□ 0.03
TMEM253-202ENST00000553744 ARFGEF2Q9Y6D5 1785 aa15.26■□□□□ 0.03
TMEM253-202ENST00000553744 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
TMEM253-202ENST00000553744 GPR162Q16538 588 aa15.26■□□□□ 0.03
TMEM253-202ENST00000553744 PARP10Q53GL7 1025 aa15.26■□□□□ 0.03
TMEM253-202ENST00000553744 TPTE2Q6XPS3 522 aa15.26■□□□□ 0.03
TMEM253-202ENST00000553744 PELP1Q8IZL8 1130 aaKnown RBP15.26■□□□□ 0.03
TMEM253-202ENST00000553744 CCDC24Q8N4L8 307 aa15.26■□□□□ 0.03
TMEM253-202ENST00000553744 BRIP1Q9BX63 1249 aa15.26■□□□□ 0.03
TMEM253-202ENST00000553744 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
TMEM253-202ENST00000553744 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
TMEM253-202ENST00000553744 FAM177BA6PVY3 158 aa15.25■□□□□ 0.03
TMEM253-202ENST00000553744 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
TMEM253-202ENST00000553744 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
TMEM253-202ENST00000553744 KCNA3P22001 575 aa15.25■□□□□ 0.03
TMEM253-202ENST00000553744 CHRNA5P30532 468 aa15.25■□□□□ 0.03
TMEM253-202ENST00000553744 TCIRG1Q13488 830 aa15.25■□□□□ 0.03
TMEM253-202ENST00000553744 TRMT2AQ8IZ69 625 aaKnown RBP15.25■□□□□ 0.03
TMEM253-202ENST00000553744 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
TMEM253-202ENST00000553744 DLEC1Q9Y238 1755 aa15.24■□□□□ 0.03
TMEM253-202ENST00000553744 COL11A2P13942 1736 aaPredicted RBP15.24■□□□□ 0.03
TMEM253-202ENST00000553744 NTSR2O95665 410 aa15.24■□□□□ 0.03
TMEM253-202ENST00000553744 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
TMEM253-202ENST00000553744 PDE6BP35913 854 aa15.24■□□□□ 0.03
TMEM253-202ENST00000553744 SUSD4Q5VX71 490 aa15.24■□□□□ 0.03
TMEM253-202ENST00000553744 PPP1R42Q7Z4L9 355 aa15.24■□□□□ 0.03
TMEM253-202ENST00000553744 WWC3Q9ULE0 1092 aa15.24■□□□□ 0.03
TMEM253-202ENST00000553744 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
TMEM253-202ENST00000553744 G2E3Q7L622 706 aa15.23■□□□□ 0.03
TMEM253-202ENST00000553744 RIC3Q7Z5B4 369 aa15.23■□□□□ 0.03
TMEM253-202ENST00000553744 NLRP10Q86W26 655 aa15.23■□□□□ 0.03
TMEM253-202ENST00000553744 NUTM1Q86Y26 1132 aa15.23■□□□□ 0.03
TMEM253-202ENST00000553744 C2CD5Q86YS7 1000 aa15.23■□□□□ 0.03
TMEM253-202ENST00000553744 PDZRN3Q9UPQ7 1066 aa15.23■□□□□ 0.03
TMEM253-202ENST00000553744 RIC1Q4ADV7 1423 aa15.23■□□□□ 0.03
TMEM253-202ENST00000553744 TNRC6CQ9HCJ0 1690 aaKnown RBP15.22■□□□□ 0.03
TMEM253-202ENST00000553744 RNF123Q5XPI4 1314 aa15.22■□□□□ 0.03
TMEM253-202ENST00000553744 H0YIN7 160 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms