RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 PDE3BQ13370 1112 aa8.46□□□□□ -1.06
SMARCE1P3-201ENST00000553649 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
SMARCE1P3-201ENST00000553649 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
SMARCE1P3-201ENST00000553649 ARHGEF10O15013 1369 aa8.46□□□□□ -1.06
SMARCE1P3-201ENST00000553649 COL14A1Q05707 1796 aaKnown RBP8.45□□□□□ -1.06
SMARCE1P3-201ENST00000553649 YBX3P16989 372 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMARCE1P3-201ENST00000553649 WNT7BP56706 349 aa8.45□□□□□ -1.06
SMARCE1P3-201ENST00000553649 SLC15A2Q16348 729 aa8.45□□□□□ -1.06
SMARCE1P3-201ENST00000553649 PTF1AQ7RTS3 328 aa8.45□□□□□ -1.06
SMARCE1P3-201ENST00000553649 PPARGC1BQ86YN6 1023 aaKnown RBP8.45□□□□□ -1.06
SMARCE1P3-201ENST00000553649 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
SMARCE1P3-201ENST00000553649 RGPD3A6NKT7 1758 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 ALDH1A1P00352 501 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 PSME1Q06323 249 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 ZSCAN1Q8NBB4 408 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 NLGN2Q8NFZ4 835 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 ZNF526Q8TF50 670 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 ERBB4Q15303 1308 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 ROCK1Q13464 1354 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 NRXN1Q9ULB1 1477 aa8.44□□□□□ -1.06
SMARCE1P3-201ENST00000553649 PTCRAQ6ISU1 281 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1P3-201ENST00000553649 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
SMARCE1P3-201ENST00000553649 SLC16A10Q8TF71 515 aa8.43□□□□□ -1.06
SMARCE1P3-201ENST00000553649 KLRG1Q96E93 195 aa8.43□□□□□ -1.06
SMARCE1P3-201ENST00000553649 STK32BQ9NY57 414 aa8.43□□□□□ -1.06
SMARCE1P3-201ENST00000553649 CLTCL1P53675 1640 aa8.43□□□□□ -1.06
SMARCE1P3-201ENST00000553649 GRIN3BO60391 1043 aa8.42□□□□□ -1.06
SMARCE1P3-201ENST00000553649 KDM4AO75164 1064 aa8.42□□□□□ -1.06
SMARCE1P3-201ENST00000553649 FMN2Q9NZ56 1722 aa8.42□□□□□ -1.06
SMARCE1P3-201ENST00000553649 H3BM21 787 aa8.41□□□□□ -1.06
SMARCE1P3-201ENST00000553649 HTRA3P83110 453 aa8.41□□□□□ -1.06
SMARCE1P3-201ENST00000553649 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
SMARCE1P3-201ENST00000553649 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
SMARCE1P3-201ENST00000553649 TNS2Q63HR2 1409 aa8.4□□□□□ -1.06
SMARCE1P3-201ENST00000553649 AATKQ6ZMQ8 1374 aa8.4□□□□□ -1.06
SMARCE1P3-201ENST00000553649 ABCC11Q96J66 1382 aa8.4□□□□□ -1.06
SMARCE1P3-201ENST00000553649 WAPLQ7Z5K2 1190 aa8.4□□□□□ -1.06
SMARCE1P3-201ENST00000553649 IRF7Q92985 503 aa8.4□□□□□ -1.06
SMARCE1P3-201ENST00000553649 PRDM11Q9NQV5 511 aa8.4□□□□□ -1.06
SMARCE1P3-201ENST00000553649 USP35Q9P2H5 1018 aa8.4□□□□□ -1.06
SMARCE1P3-201ENST00000553649 PLEKHH1Q9ULM0 1364 aa8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 RPGRIP1LQ68CZ1 1315 aa8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 FAM181BA6NEQ2 426 aa8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 TXNRD1Q16881 649 aa8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 STRN4Q9NRL3 753 aa8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 PEAK1Q9H792 1746 aa8.39□□□□□ -1.07
SMARCE1P3-201ENST00000553649 OVOS2A0A0G2JMS6 1433 aa8.38□□□□□ -1.07
SMARCE1P3-201ENST00000553649 OVOS2A0A0J9YW53 1432 aa8.38□□□□□ -1.07
SMARCE1P3-201ENST00000553649 OVOS2Q6IE36 1432 aa8.38□□□□□ -1.07
SMARCE1P3-201ENST00000553649 KNDC1Q76NI1 1749 aa8.38□□□□□ -1.07
SMARCE1P3-201ENST00000553649 CHRNA2Q15822 529 aa8.38□□□□□ -1.07
SMARCE1P3-201ENST00000553649 SMYD5Q6GMV2 418 aa8.38□□□□□ -1.07
SMARCE1P3-201ENST00000553649 SSH2Q76I76 1423 aa8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 TRPM3Q9HCF6 1732 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 KIAA0232Q92628 1395 aa8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 ALS2Q96Q42 1657 aa8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 HOXA2O43364 376 aa8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 JUNDP17535 347 aa8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 TCP11L2Q8N4U5 519 aa8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 CRYBG1Q9Y4K1 1723 aa8.37□□□□□ -1.07
SMARCE1P3-201ENST00000553649 DHX57Q6P158 1386 aaKnown RBP8.36□□□□□ -1.07
SMARCE1P3-201ENST00000553649 TOMM70O94826 608 aa8.36□□□□□ -1.07
SMARCE1P3-201ENST00000553649 SUZ12Q15022 739 aaKnown RBP8.36□□□□□ -1.07
SMARCE1P3-201ENST00000553649 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
SMARCE1P3-201ENST00000553649 SIRT1Q96EB6 747 aa8.36□□□□□ -1.07
SMARCE1P3-201ENST00000553649 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
SMARCE1P3-201ENST00000553649 ANKARQ7Z5J8 1434 aa8.36□□□□□ -1.07
SMARCE1P3-201ENST00000553649 ATP7BP35670 1465 aa8.35□□□□□ -1.07
SMARCE1P3-201ENST00000553649 HSPA1AP0DMV8 641 aaKnown RBP8.35□□□□□ -1.07
SMARCE1P3-201ENST00000553649 HSPA1BP0DMV9 641 aaKnown RBP8.35□□□□□ -1.07
SMARCE1P3-201ENST00000553649 SH3BP2P78314 561 aa8.35□□□□□ -1.07
SMARCE1P3-201ENST00000553649 EHBP1Q8NDI1 1231 aa8.35□□□□□ -1.07
SMARCE1P3-201ENST00000553649 STK26Q9P289 416 aa8.35□□□□□ -1.07
SMARCE1P3-201ENST00000553649 BCL9O00512 1426 aa8.35□□□□□ -1.07
SMARCE1P3-201ENST00000553649 WDR90Q96KV7 1748 aa8.34□□□□□ -1.07
SMARCE1P3-201ENST00000553649 USP46P62068 366 aa8.34□□□□□ -1.07
SMARCE1P3-201ENST00000553649 ZNF827Q17R98 1081 aa8.34□□□□□ -1.07
SMARCE1P3-201ENST00000553649 PCNTO95613 3336 aa8.34□□□□□ -1.07
SMARCE1P3-201ENST00000553649 PAPPAQ13219 1627 aa8.33□□□□□ -1.08
SMARCE1P3-201ENST00000553649 PPLO60437 1756 aa8.33□□□□□ -1.08
SMARCE1P3-201ENST00000553649 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
SMARCE1P3-201ENST00000553649 PMFBP1Q8TBY8 1022 aa8.33□□□□□ -1.08
SMARCE1P3-201ENST00000553649 NUDT12Q9BQG2 462 aa8.33□□□□□ -1.08
SMARCE1P3-201ENST00000553649 THRAP3Q9Y2W1 955 aaKnown RBP8.33□□□□□ -1.08
SMARCE1P3-201ENST00000553649 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
SMARCE1P3-201ENST00000553649 PHRF1Q9P1Y6 1649 aaKnown RBP8.32□□□□□ -1.08
SMARCE1P3-201ENST00000553649 PARP4Q9UKK3 1724 aaKnown RBP8.32□□□□□ -1.08
SMARCE1P3-201ENST00000553649 POLD1P28340 1107 aa8.32□□□□□ -1.08
SMARCE1P3-201ENST00000553649 MDM2Q00987 491 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1P3-201ENST00000553649 KIF1BO60333 1816 aa8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 PIK3C2GO75747 1445 aa8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 YTHDC2Q9H6S0 1430 aaKnown RBP8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 GSK3AP49840 483 aa8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 EVA1CP58658 441 aa8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 RGL3Q3MIN7 710 aa8.31□□□□□ -1.08
SMARCE1P3-201ENST00000553649 MARCH10Q8NA82 808 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms