RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ZBTB3Q9H5J0 574 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 MAP3K2Q9Y2U5 619 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
CHD8-204ENST00000553622 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 SMIM5Q71RC9 77 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 PROM2Q8N271 834 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 TMEM57Q8N5G2 664 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 RTCBQ9Y3I0 505 aaKnown RBP12.38□□□□□ -0.43
CHD8-204ENST00000553622 ADCY9O60503 1353 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 COL15A1P39059 1388 aa12.38□□□□□ -0.43
CHD8-204ENST00000553622 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
CHD8-204ENST00000553622 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
CHD8-204ENST00000553622 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
CHD8-204ENST00000553622 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
CHD8-204ENST00000553622 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
CHD8-204ENST00000553622 ABCC4O15439 1325 aa12.37□□□□□ -0.43
CHD8-204ENST00000553622 SCN7AQ01118 1682 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 A0A087WZG4 1122 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 RPS6KA4O75676 772 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
CHD8-204ENST00000553622 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 CCDC125Q86Z20 511 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 CAMKK2Q96RR4 588 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 MYD88Q99836 296 aa12.36□□□□□ -0.43
CHD8-204ENST00000553622 PXDNLA1KZ92 1463 aa12.35□□□□□ -0.43
CHD8-204ENST00000553622 MSH5O43196 834 aa12.35□□□□□ -0.43
CHD8-204ENST00000553622 CCT4P50991 539 aaKnown RBP12.35□□□□□ -0.43
CHD8-204ENST00000553622 MVPQ14764 893 aaKnown RBP12.35□□□□□ -0.43
CHD8-204ENST00000553622 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
CHD8-204ENST00000553622 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
CHD8-204ENST00000553622 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
CHD8-204ENST00000553622 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 ZPR1O75312 459 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 RFC4P35249 363 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 ZNF827Q17R98 1081 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 METTL22Q9BUU2 404 aaPredicted RBP12.34□□□□□ -0.43
CHD8-204ENST00000553622 SRCIN1Q9C0H9 1055 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 GTF3C3Q9Y5Q9 886 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 QSER1Q2KHR3 1735 aa12.34□□□□□ -0.43
CHD8-204ENST00000553622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
CHD8-204ENST00000553622 CWF19L2Q2TBE0 894 aaKnown RBP12.33□□□□□ -0.44
CHD8-204ENST00000553622 INTS3Q68E01 1043 aaKnown RBP12.33□□□□□ -0.44
CHD8-204ENST00000553622 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
CHD8-204ENST00000553622 AMIGO3Q86WK7 504 aa12.33□□□□□ -0.44
CHD8-204ENST00000553622 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHD8-204ENST00000553622 STK32BQ9NY57 414 aa12.33□□□□□ -0.44
CHD8-204ENST00000553622 DDX19BQ9UMR2 479 aa12.33□□□□□ -0.44
CHD8-204ENST00000553622 GPTP24298 496 aa12.32□□□□□ -0.44
CHD8-204ENST00000553622 HLFQ16534 295 aa12.32□□□□□ -0.44
CHD8-204ENST00000553622 ARHGEF1Q92888 912 aaKnown RBP12.32□□□□□ -0.44
CHD8-204ENST00000553622 SRP68Q9UHB9 627 aaKnown RBP12.32□□□□□ -0.44
CHD8-204ENST00000553622 ZNF652Q9Y2D9 606 aa12.32□□□□□ -0.44
CHD8-204ENST00000553622 MYH3P11055 1940 aa12.32□□□□□ -0.44
CHD8-204ENST00000553622 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 ERVV-1B6SEH8 477 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 CAMTA2O94983 1202 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 ADRA2BP18089 450 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 LINS1Q8NG48 757 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 C9orf78Q9NZ63 289 aaPredicted RBP12.31□□□□□ -0.44
CHD8-204ENST00000553622 NARFQ9UHQ1 456 aa12.31□□□□□ -0.44
CHD8-204ENST00000553622 NEURL1BA8MQ27 555 aa12.3□□□□□ -0.44
CHD8-204ENST00000553622 ALDH1L1O75891 902 aa12.3□□□□□ -0.44
CHD8-204ENST00000553622 SSFA2P28290 1259 aa12.3□□□□□ -0.44
CHD8-204ENST00000553622 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
CHD8-204ENST00000553622 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
CHD8-204ENST00000553622 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
CHD8-204ENST00000553622 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
CHD8-204ENST00000553622 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
CHD8-204ENST00000553622 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
CHD8-204ENST00000553622 FAM177BA6PVY3 158 aa12.29□□□□□ -0.44
CHD8-204ENST00000553622 IGKV5-2P06315 115 aa12.29□□□□□ -0.44
CHD8-204ENST00000553622 JARID2Q92833 1246 aaPredicted RBP12.29□□□□□ -0.44
CHD8-204ENST00000553622 MEIS3Q99687 375 aa12.29□□□□□ -0.44
CHD8-204ENST00000553622 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
CHD8-204ENST00000553622 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
CHD8-204ENST00000553622 USP42Q9H9J4 1324 aaKnown RBP12.29□□□□□ -0.44
CHD8-204ENST00000553622 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
CHD8-204ENST00000553622 SLC15A2Q16348 729 aa12.28□□□□□ -0.44
CHD8-204ENST00000553622 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
CHD8-204ENST00000553622 FLAD1Q8NFF5 587 aa12.28□□□□□ -0.44
CHD8-204ENST00000553622 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHD8-204ENST00000553622 GRM8O00222 908 aa12.27□□□□□ -0.45
CHD8-204ENST00000553622 ZBTB7BO15156 539 aaPredicted RBP12.27□□□□□ -0.45
CHD8-204ENST00000553622 GNAI3P08754 354 aa12.27□□□□□ -0.45
CHD8-204ENST00000553622 GCKRQ14397 625 aa12.27□□□□□ -0.45
CHD8-204ENST00000553622 UBE3BQ7Z3V4 1068 aa12.27□□□□□ -0.45
CHD8-204ENST00000553622 COL23A1Q86Y22 540 aaPredicted RBP12.27□□□□□ -0.45
CHD8-204ENST00000553622 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.45
CHD8-204ENST00000553622 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.45
CHD8-204ENST00000553622 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms