RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 KIF6Q6ZMV9 814 aa23.91■■□□□ 1.42
CPSF2-202ENST00000553427 ATP10DQ9P241 1426 aa23.91■■□□□ 1.42
CPSF2-202ENST00000553427 AFDNP55196 1824 aaKnown RBP23.9■■□□□ 1.42
CPSF2-202ENST00000553427 TTLL7Q6ZT98 887 aa23.9■■□□□ 1.42
CPSF2-202ENST00000553427 MIER1Q8N108 512 aa23.9■■□□□ 1.42
CPSF2-202ENST00000553427 TSR2Q969E8 191 aaKnown RBP23.9■■□□□ 1.42
CPSF2-202ENST00000553427 SETDB2Q96T68 719 aa23.9■■□□□ 1.42
CPSF2-202ENST00000553427 DBF4Q9UBU7 674 aaPredicted RBP23.9■■□□□ 1.42
CPSF2-202ENST00000553427 FANCIQ9NVI1 1328 aa23.89■■□□□ 1.42
CPSF2-202ENST00000553427 C8orf58Q8NAV2 365 aa23.89■■□□□ 1.41
CPSF2-202ENST00000553427 CHPF2Q9P2E5 772 aa23.89■■□□□ 1.41
CPSF2-202ENST00000553427 SALL2Q9Y467 1007 aaPredicted RBP23.89■■□□□ 1.41
CPSF2-202ENST00000553427 BICDL1Q6ZP65 573 aa23.88■■□□□ 1.41
CPSF2-202ENST00000553427 HLFQ16534 295 aa23.87■■□□□ 1.41
CPSF2-202ENST00000553427 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
CPSF2-202ENST00000553427 GOLGB1Q14789 3259 aaKnown RBP23.86■■□□□ 1.41
CPSF2-202ENST00000553427 ANXA1P04083 346 aa23.86■■□□□ 1.41
CPSF2-202ENST00000553427 HYPKQ9NX55 129 aa23.86■■□□□ 1.41
CPSF2-202ENST00000553427 GIGYF2Q6Y7W6 1299 aaKnown RBP23.85■■□□□ 1.41
CPSF2-202ENST00000553427 MYH16Q9H6N6 1097 aa23.85■■□□□ 1.41
CPSF2-202ENST00000553427 IBTKQ9P2D0 1353 aaPredicted RBP23.84■■□□□ 1.41
CPSF2-202ENST00000553427 PRR5LQ6MZQ0 368 aa23.84■■□□□ 1.41
CPSF2-202ENST00000553427 COPS6Q7L5N1 327 aa23.84■■□□□ 1.41
CPSF2-202ENST00000553427 TSPYL6Q8N831 410 aa23.84■■□□□ 1.41
CPSF2-202ENST00000553427 XAGE3Q8WTP9 111 aa23.84■■□□□ 1.41
CPSF2-202ENST00000553427 ZBTB3Q9H5J0 574 aa23.84■■□□□ 1.41
CPSF2-202ENST00000553427 NIP7Q9Y221 180 aaKnown RBP eCLIP23.84■■□□□ 1.41
CPSF2-202ENST00000553427 NUP98P52948 1817 aa23.84■■□□□ 1.41
CPSF2-202ENST00000553427 ELL2O00472 640 aaPredicted RBP23.83■■□□□ 1.41
CPSF2-202ENST00000553427 GOLGA2Q08379 1002 aa23.83■■□□□ 1.41
CPSF2-202ENST00000553427 TWISTNBQ3B726 338 aaPredicted RBP23.83■■□□□ 1.41
CPSF2-202ENST00000553427 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.41
CPSF2-202ENST00000553427 CNBD1Q8NA66 436 aa23.83■■□□□ 1.41
CPSF2-202ENST00000553427 SPINK5Q9NQ38 1064 aaPredicted RBP23.83■■□□□ 1.41
CPSF2-202ENST00000553427 UTRNP46939 3433 aa23.82■■□□□ 1.4
CPSF2-202ENST00000553427 DPEP1P16444 411 aa23.82■■□□□ 1.4
CPSF2-202ENST00000553427 GPR162Q16538 588 aa23.82■■□□□ 1.4
CPSF2-202ENST00000553427 PDZRN3Q9UPQ7 1066 aa23.82■■□□□ 1.4
CPSF2-202ENST00000553427 NBPF5PQ86XG9 351 aaPredicted RBP23.81■■□□□ 1.4
CPSF2-202ENST00000553427 BRIP1Q9BX63 1249 aa23.81■■□□□ 1.4
CPSF2-202ENST00000553427 BRCA1P38398 1863 aaKnown RBP23.81■■□□□ 1.4
CPSF2-202ENST00000553427 N4BP2Q86UW6 1770 aaPredicted RBP23.8■■□□□ 1.4
CPSF2-202ENST00000553427 A0A0G2JLW4 131 aa23.8■■□□□ 1.4
CPSF2-202ENST00000553427 YBX3P16989 372 aaKnown RBP eCLIP23.8■■□□□ 1.4
CPSF2-202ENST00000553427 KCNA3P22001 575 aa23.8■■□□□ 1.4
CPSF2-202ENST00000553427 HSP90AB3PQ58FF7 597 aa23.8■■□□□ 1.4
CPSF2-202ENST00000553427 ZNF34Q8IZ26 560 aa23.8■■□□□ 1.4
CPSF2-202ENST00000553427 GRIN3BO60391 1043 aa23.79■■□□□ 1.4
CPSF2-202ENST00000553427 ST5P78524 1137 aa23.79■■□□□ 1.4
CPSF2-202ENST00000553427 TPTE2Q6XPS3 522 aa23.79■■□□□ 1.4
CPSF2-202ENST00000553427 PLBD2Q8NHP8 589 aa23.79■■□□□ 1.4
CPSF2-202ENST00000553427 UBN2Q6ZU65 1347 aa23.79■■□□□ 1.4
CPSF2-202ENST00000553427 ANKRD31Q8N7Z5 1873 aa23.79■■□□□ 1.4
CPSF2-202ENST00000553427 DLEC1Q9Y238 1755 aa23.78■■□□□ 1.4
CPSF2-202ENST00000553427 AIMP1Q12904 312 aaKnown RBP23.78■■□□□ 1.4
CPSF2-202ENST00000553427 PARP10Q53GL7 1025 aa23.78■■□□□ 1.4
CPSF2-202ENST00000553427 NYXQ9GZU5 481 aa23.78■■□□□ 1.4
CPSF2-202ENST00000553427 RIC1Q4ADV7 1423 aa23.77■■□□□ 1.4
CPSF2-202ENST00000553427 E9PSI1 815 aa23.77■■□□□ 1.4
CPSF2-202ENST00000553427 PDE6BP35913 854 aa23.77■■□□□ 1.4
CPSF2-202ENST00000553427 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
CPSF2-202ENST00000553427 ANKRD36CQ5JPF3 1778 aa23.77■■□□□ 1.4
CPSF2-202ENST00000553427 NPHP1O15259 732 aa23.76■■□□□ 1.39
CPSF2-202ENST00000553427 EXOSC9Q06265 439 aaKnown RBP23.76■■□□□ 1.39
CPSF2-202ENST00000553427 ANKRD13DQ6ZTN6 518 aa23.76■■□□□ 1.39
CPSF2-202ENST00000553427 STK31Q9BXU1 1019 aa23.76■■□□□ 1.39
CPSF2-202ENST00000553427 PIM2Q9P1W9 311 aa23.76■■□□□ 1.39
CPSF2-202ENST00000553427 VAMP4O75379 141 aa23.75■■□□□ 1.39
CPSF2-202ENST00000553427 CHRNA5P30532 468 aa23.75■■□□□ 1.39
CPSF2-202ENST00000553427 TCIRG1Q13488 830 aa23.75■■□□□ 1.39
CPSF2-202ENST00000553427 RNF123Q5XPI4 1314 aa23.75■■□□□ 1.39
CPSF2-202ENST00000553427 GPTP24298 496 aa23.74■■□□□ 1.39
CPSF2-202ENST00000553427 C2CD5Q86YS7 1000 aa23.74■■□□□ 1.39
CPSF2-202ENST00000553427 KLRG2A4D1S0 409 aaPredicted RBP23.73■■□□□ 1.39
CPSF2-202ENST00000553427 H0YIN7 160 aa23.73■■□□□ 1.39
CPSF2-202ENST00000553427 NTSR2O95665 410 aa23.73■■□□□ 1.39
CPSF2-202ENST00000553427 PPP1R42Q7Z4L9 355 aa23.73■■□□□ 1.39
CPSF2-202ENST00000553427 PHAXQ9H814 394 aaKnown RBP23.73■■□□□ 1.39
CPSF2-202ENST00000553427 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
CPSF2-202ENST00000553427 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
CPSF2-202ENST00000553427 DALRD3Q5D0E6 543 aaKnown RBP23.72■■□□□ 1.39
CPSF2-202ENST00000553427 SUSD4Q5VX71 490 aa23.72■■□□□ 1.39
CPSF2-202ENST00000553427 ARFGEF2Q9Y6D5 1785 aa23.72■■□□□ 1.39
CPSF2-202ENST00000553427 ARFGEF1Q9Y6D6 1849 aa23.71■■□□□ 1.39
CPSF2-202ENST00000553427 ABCC12Q96J65 1359 aa23.71■■□□□ 1.39
CPSF2-202ENST00000553427 DDX58O95786 925 aaKnown RBP23.71■■□□□ 1.39
CPSF2-202ENST00000553427 NLRP10Q86W26 655 aa23.71■■□□□ 1.39
CPSF2-202ENST00000553427 CCDC24Q8N4L8 307 aa23.71■■□□□ 1.39
CPSF2-202ENST00000553427 ISCA1Q9BUE6 129 aa23.71■■□□□ 1.39
CPSF2-202ENST00000553427 BCS1LQ9Y276 419 aa23.71■■□□□ 1.39
CPSF2-202ENST00000553427 TRIM28Q13263 835 aaKnown RBP23.7■■□□□ 1.38
CPSF2-202ENST00000553427 CACNA1FO60840 1977 aa23.69■■□□□ 1.38
CPSF2-202ENST00000553427 FAM177BA6PVY3 158 aa23.69■■□□□ 1.38
CPSF2-202ENST00000553427 SRGNP10124 158 aa23.69■■□□□ 1.38
CPSF2-202ENST00000553427 GTF2E1P29083 439 aaPredicted RBP23.69■■□□□ 1.38
CPSF2-202ENST00000553427 STYK1Q6J9G0 422 aa23.69■■□□□ 1.38
CPSF2-202ENST00000553427 TRMT2AQ8IZ69 625 aaKnown RBP23.69■■□□□ 1.38
CPSF2-202ENST00000553427 UTP14AQ9BVJ6 771 aaKnown RBP23.69■■□□□ 1.38
CPSF2-202ENST00000553427 WWC3Q9ULE0 1092 aa23.69■■□□□ 1.38
CPSF2-202ENST00000553427 SLC4A2P04920 1241 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms