RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 MAP3K15Q6ZN16 1313 aa25.18■■□□□ 1.62
PTCH1-227ENST00000553256 SETDB2Q96T68 719 aa25.18■■□□□ 1.62
PTCH1-227ENST00000553256 MYL6BP14649 208 aa25.17■■□□□ 1.62
PTCH1-227ENST00000553256 WWC1Q8IX03 1113 aa25.17■■□□□ 1.62
PTCH1-227ENST00000553256 LAS1LQ9Y4W2 734 aaKnown RBP25.17■■□□□ 1.62
PTCH1-227ENST00000553256 DLEC1Q9Y238 1755 aa25.17■■□□□ 1.62
PTCH1-227ENST00000553256 ATP10DQ9P241 1426 aa25.17■■□□□ 1.62
PTCH1-227ENST00000553256 ANXA1P04083 346 aa25.16■■□□□ 1.62
PTCH1-227ENST00000553256 EIF2S2P20042 333 aaKnown RBP25.16■■□□□ 1.62
PTCH1-227ENST00000553256 NPM2Q86SE8 214 aaKnown RBP25.16■■□□□ 1.62
PTCH1-227ENST00000553256 BRIP1Q9BX63 1249 aa25.16■■□□□ 1.62
PTCH1-227ENST00000553256 PIM2Q9P1W9 311 aa25.16■■□□□ 1.62
PTCH1-227ENST00000553256 GNAI1P63096 354 aa25.15■■□□□ 1.62
PTCH1-227ENST00000553256 ZNF652Q9Y2D9 606 aa25.15■■□□□ 1.62
PTCH1-227ENST00000553256 ADCY9O60503 1353 aa25.15■■□□□ 1.62
PTCH1-227ENST00000553256 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.62
PTCH1-227ENST00000553256 CALD1Q05682 793 aaKnown RBP25.14■■□□□ 1.62
PTCH1-227ENST00000553256 NGEFQ8N5V2 710 aa25.14■■□□□ 1.62
PTCH1-227ENST00000553256 DDX21Q9NR30 783 aaKnown RBP eCLIP25.14■■□□□ 1.62
PTCH1-227ENST00000553256 BCS1LQ9Y276 419 aa25.14■■□□□ 1.62
PTCH1-227ENST00000553256 COL11A2P13942 1736 aaPredicted RBP25.13■■□□□ 1.61
PTCH1-227ENST00000553256 KLRG2A4D1S0 409 aaPredicted RBP25.13■■□□□ 1.61
PTCH1-227ENST00000553256 DUSP27Q5VZP5 1158 aa25.13■■□□□ 1.61
PTCH1-227ENST00000553256 CCDC24Q8N4L8 307 aa25.13■■□□□ 1.61
PTCH1-227ENST00000553256 NUP98P52948 1817 aa25.13■■□□□ 1.61
PTCH1-227ENST00000553256 UBN2Q6ZU65 1347 aa25.12■■□□□ 1.61
PTCH1-227ENST00000553256 SENP3-EIF4A1A0A087X0R7 540 aa25.12■■□□□ 1.61
PTCH1-227ENST00000553256 ZNF34Q8IZ26 560 aa25.12■■□□□ 1.61
PTCH1-227ENST00000553256 CNBD1Q8NA66 436 aa25.12■■□□□ 1.61
PTCH1-227ENST00000553256 ZNF784Q8NCA9 323 aaPredicted RBP25.12■■□□□ 1.61
PTCH1-227ENST00000553256 NIP7Q9Y221 180 aaKnown RBP eCLIP25.12■■□□□ 1.61
PTCH1-227ENST00000553256 DALRD3Q5D0E6 543 aaKnown RBP25.11■■□□□ 1.61
PTCH1-227ENST00000553256 GIGYF2Q6Y7W6 1299 aaKnown RBP25.11■■□□□ 1.61
PTCH1-227ENST00000553256 C8orf58Q8NAV2 365 aa25.11■■□□□ 1.61
PTCH1-227ENST00000553256 IL16Q14005 1332 aa25.11■■□□□ 1.61
PTCH1-227ENST00000553256 C2CD5Q86YS7 1000 aa25.1■■□□□ 1.61
PTCH1-227ENST00000553256 NECTIN2Q92692 538 aa25.1■■□□□ 1.61
PTCH1-227ENST00000553256 ZBTB3Q9H5J0 574 aa25.1■■□□□ 1.61
PTCH1-227ENST00000553256 CHPF2Q9P2E5 772 aa25.1■■□□□ 1.61
PTCH1-227ENST00000553256 IBTKQ9P2D0 1353 aaPredicted RBP25.09■■□□□ 1.61
PTCH1-227ENST00000553256 HDGFL1Q5TGJ6 251 aa25.09■■□□□ 1.61
PTCH1-227ENST00000553256 KIF6Q6ZMV9 814 aa25.09■■□□□ 1.61
PTCH1-227ENST00000553256 COPS6Q7L5N1 327 aa25.09■■□□□ 1.61
PTCH1-227ENST00000553256 NBPF5PQ86XG9 351 aaPredicted RBP25.08■■□□□ 1.61
PTCH1-227ENST00000553256 XAGE3Q8WTP9 111 aa25.08■■□□□ 1.61
PTCH1-227ENST00000553256 PDZRN3Q9UPQ7 1066 aa25.08■■□□□ 1.61
PTCH1-227ENST00000553256 SRGNP10124 158 aa25.07■■□□□ 1.6
PTCH1-227ENST00000553256 PDE6BP35913 854 aa25.07■■□□□ 1.6
PTCH1-227ENST00000553256 H0YIN7 160 aa25.06■■□□□ 1.6
PTCH1-227ENST00000553256 TPTE2Q6XPS3 522 aa25.06■■□□□ 1.6
PTCH1-227ENST00000553256 TSPYL6Q8N831 410 aa25.06■■□□□ 1.6
PTCH1-227ENST00000553256 ABCC12Q96J65 1359 aa25.05■■□□□ 1.6
PTCH1-227ENST00000553256 RIC1Q4ADV7 1423 aa25.05■■□□□ 1.6
PTCH1-227ENST00000553256 SUSD4Q5VX71 490 aa25.05■■□□□ 1.6
PTCH1-227ENST00000553256 TSR2Q969E8 191 aaKnown RBP25.05■■□□□ 1.6
PTCH1-227ENST00000553256 DBF4Q9UBU7 674 aaPredicted RBP25.05■■□□□ 1.6
PTCH1-227ENST00000553256 NTSR2O95665 410 aa25.04■■□□□ 1.6
PTCH1-227ENST00000553256 ST5P78524 1137 aa25.04■■□□□ 1.6
PTCH1-227ENST00000553256 FAM9BQ8IZU0 186 aa25.04■■□□□ 1.6
PTCH1-227ENST00000553256 TTLL6Q8N841 843 aa25.04■■□□□ 1.6
PTCH1-227ENST00000553256 ZNF521Q96K83 1311 aa25.04■■□□□ 1.6
PTCH1-227ENST00000553256 TNRC6CQ9HCJ0 1690 aaKnown RBP25.04■■□□□ 1.6
PTCH1-227ENST00000553256 WDR63Q8IWG1 891 aa25.03■■□□□ 1.6
PTCH1-227ENST00000553256 SPINK5Q9NQ38 1064 aaPredicted RBP25.03■■□□□ 1.6
PTCH1-227ENST00000553256 GPTP24298 496 aa25.02■■□□□ 1.6
PTCH1-227ENST00000553256 PRELPP51888 382 aa25.02■■□□□ 1.6
PTCH1-227ENST00000553256 CRY2Q49AN0 593 aa25.02■■□□□ 1.6
PTCH1-227ENST00000553256 STYK1Q6J9G0 422 aa25.02■■□□□ 1.6
PTCH1-227ENST00000553256 ELL2O00472 640 aaPredicted RBP25.01■■□□□ 1.59
PTCH1-227ENST00000553256 TCIRG1Q13488 830 aa25■■□□□ 1.59
PTCH1-227ENST00000553256 ERFEQ4G0M1 354 aa25■■□□□ 1.59
PTCH1-227ENST00000553256 ARHGAP27Q6ZUM4 889 aa25■■□□□ 1.59
PTCH1-227ENST00000553256 NUTM1Q86Y26 1132 aa25■■□□□ 1.59
PTCH1-227ENST00000553256 C7orf43Q8WVR3 580 aa25■■□□□ 1.59
PTCH1-227ENST00000553256 HYPKQ9NX55 129 aa25■■□□□ 1.59
PTCH1-227ENST00000553256 AIMP1Q12904 312 aaKnown RBP24.99■■□□□ 1.59
PTCH1-227ENST00000553256 PARP10Q53GL7 1025 aa24.99■■□□□ 1.59
PTCH1-227ENST00000553256 ANKRD36CQ5JPF3 1778 aa24.99■■□□□ 1.59
PTCH1-227ENST00000553256 PLBD2Q8NHP8 589 aa24.99■■□□□ 1.59
PTCH1-227ENST00000553256 MASTLQ96GX5 879 aa24.99■■□□□ 1.59
PTCH1-227ENST00000553256 NYXQ9GZU5 481 aa24.99■■□□□ 1.59
PTCH1-227ENST00000553256 FANCIQ9NVI1 1328 aa24.99■■□□□ 1.59
PTCH1-227ENST00000553256 SLX4Q8IY92 1834 aa24.98■■□□□ 1.59
PTCH1-227ENST00000553256 ARFGEF2Q9Y6D5 1785 aa24.98■■□□□ 1.59
PTCH1-227ENST00000553256 FAM177BA6PVY3 158 aa24.98■■□□□ 1.59
PTCH1-227ENST00000553256 SLC10A5Q5PT55 438 aa24.98■■□□□ 1.59
PTCH1-227ENST00000553256 NLRP10Q86W26 655 aa24.98■■□□□ 1.59
PTCH1-227ENST00000553256 ISCA1Q9BUE6 129 aa24.98■■□□□ 1.59
PTCH1-227ENST00000553256 PHAXQ9H814 394 aaKnown RBP24.98■■□□□ 1.59
PTCH1-227ENST00000553256 CCER2I3L3R5 266 aa24.97■■□□□ 1.59
PTCH1-227ENST00000553256 NFKBIEO00221 500 aa24.97■■□□□ 1.59
PTCH1-227ENST00000553256 ANKRD13DQ6ZTN6 518 aa24.97■■□□□ 1.59
PTCH1-227ENST00000553256 ZNF622Q969S3 477 aaKnown RBP eCLIP24.97■■□□□ 1.59
PTCH1-227ENST00000553256 SNED1Q8TER0 1413 aa24.96■■□□□ 1.59
PTCH1-227ENST00000553256 HSP90AB3PQ58FF7 597 aa24.96■■□□□ 1.59
PTCH1-227ENST00000553256 C3orf67Q6ZVT6 689 aa24.96■■□□□ 1.59
PTCH1-227ENST00000553256 SALL2Q9Y467 1007 aaPredicted RBP24.96■■□□□ 1.59
PTCH1-227ENST00000553256 NPR1P16066 1061 aa24.95■■□□□ 1.58
PTCH1-227ENST00000553256 CNKSR1Q969H4 720 aa24.95■■□□□ 1.58
PTCH1-227ENST00000553256 SBF1O95248 1867 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms