RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.45
PRKCH-203ENST00000552875 ZNF277Q9NRM2 450 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-203ENST00000552875 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
PRKCH-203ENST00000552875 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
PRKCH-203ENST00000552875 ST5P78524 1137 aa12.22□□□□□ -0.45
PRKCH-203ENST00000552875 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
PRKCH-203ENST00000552875 GJA3Q9Y6H8 435 aa12.22□□□□□ -0.45
PRKCH-203ENST00000552875 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
PRKCH-203ENST00000552875 MYH14Q7Z406 1995 aaKnown RBP12.21□□□□□ -0.46
PRKCH-203ENST00000552875 A0A087WZG4 1122 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 FYB1O15117 783 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 PPM1GO15355 546 aaPredicted RBP12.2□□□□□ -0.46
PRKCH-203ENST00000552875 TRPA1O75762 1119 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 SRGNP10124 158 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 HDAC9Q9UKV0 1011 aa12.2□□□□□ -0.46
PRKCH-203ENST00000552875 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
PRKCH-203ENST00000552875 ST20-MTHFSA0A0A6YYL1 179 aa12.19□□□□□ -0.46
PRKCH-203ENST00000552875 MTHFSP49914 203 aa12.19□□□□□ -0.46
PRKCH-203ENST00000552875 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
PRKCH-203ENST00000552875 EYA1Q99502 592 aa12.19□□□□□ -0.46
PRKCH-203ENST00000552875 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
PRKCH-203ENST00000552875 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
PRKCH-203ENST00000552875 EPS15P42566 896 aa12.18□□□□□ -0.46
PRKCH-203ENST00000552875 HUNKP57058 714 aa12.18□□□□□ -0.46
PRKCH-203ENST00000552875 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
PRKCH-203ENST00000552875 C1orf141Q5JVX7 400 aa12.18□□□□□ -0.46
PRKCH-203ENST00000552875 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
PRKCH-203ENST00000552875 ADARB2Q9NS39 739 aaKnown RBP12.18□□□□□ -0.46
PRKCH-203ENST00000552875 RNF186Q9NXI6 227 aa12.18□□□□□ -0.46
PRKCH-203ENST00000552875 SCNN1DP51172 638 aa12.17□□□□□ -0.46
PRKCH-203ENST00000552875 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
PRKCH-203ENST00000552875 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
PRKCH-203ENST00000552875 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
PRKCH-203ENST00000552875 C7orf43Q8WVR3 580 aa12.17□□□□□ -0.46
PRKCH-203ENST00000552875 CYP19A1P11511 503 aaPredicted RBP12.16□□□□□ -0.46
PRKCH-203ENST00000552875 NPR1P16066 1061 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 TBC1D9BQ66K14 1250 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 RGMBQ6NW40 437 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
PRKCH-203ENST00000552875 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
PRKCH-203ENST00000552875 KIF23Q02241 960 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-203ENST00000552875 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-203ENST00000552875 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
PRKCH-203ENST00000552875 ZC3H15Q8WU90 426 aaKnown RBP12.15□□□□□ -0.46
PRKCH-203ENST00000552875 ZIC5Q96T25 663 aa12.15□□□□□ -0.46
PRKCH-203ENST00000552875 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
PRKCH-203ENST00000552875 ADAMTS7Q9UKP4 1686 aa12.15□□□□□ -0.46
PRKCH-203ENST00000552875 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
PRKCH-203ENST00000552875 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-203ENST00000552875 FBXO46Q6PJ61 603 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-203ENST00000552875 PSMD1Q99460 953 aa12.14□□□□□ -0.47
PRKCH-203ENST00000552875 CARD11Q9BXL7 1154 aa12.14□□□□□ -0.47
PRKCH-203ENST00000552875 GLIS2Q9BZE0 524 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-203ENST00000552875 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-203ENST00000552875 PITPNM2Q9BZ72 1349 aa12.13□□□□□ -0.47
PRKCH-203ENST00000552875 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
PRKCH-203ENST00000552875 ALDH1B1P30837 517 aa12.13□□□□□ -0.47
PRKCH-203ENST00000552875 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
PRKCH-203ENST00000552875 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
PRKCH-203ENST00000552875 STARD3NLO95772 234 aa12.12□□□□□ -0.47
PRKCH-203ENST00000552875 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
PRKCH-203ENST00000552875 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
PRKCH-203ENST00000552875 C2orf69Q8N8R5 385 aa12.12□□□□□ -0.47
PRKCH-203ENST00000552875 GPRC5DQ9NZD1 345 aa12.12□□□□□ -0.47
PRKCH-203ENST00000552875 TJP1Q07157 1748 aa12.11□□□□□ -0.47
PRKCH-203ENST00000552875 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
PRKCH-203ENST00000552875 FAM155AB1AL88 458 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-203ENST00000552875 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
PRKCH-203ENST00000552875 LARGE2Q8N3Y3 721 aa12.11□□□□□ -0.47
PRKCH-203ENST00000552875 PGAP2Q9UHJ9 254 aa12.11□□□□□ -0.47
PRKCH-203ENST00000552875 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
PRKCH-203ENST00000552875 COL11A2P13942 1736 aaPredicted RBP12.1□□□□□ -0.47
PRKCH-203ENST00000552875 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
PRKCH-203ENST00000552875 NBPF5PQ86XG9 351 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-203ENST00000552875 CSRNP1Q96S65 589 aa12.09□□□□□ -0.47
PRKCH-203ENST00000552875 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
PRKCH-203ENST00000552875 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
PRKCH-203ENST00000552875 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-203ENST00000552875 GBA2Q9HCG7 927 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-203ENST00000552875 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-203ENST00000552875 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
PRKCH-203ENST00000552875 TBC1D2BQ9UPU7 963 aa12.07□□□□□ -0.48
PRKCH-203ENST00000552875 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
PRKCH-203ENST00000552875 KLRG2A4D1S0 409 aaPredicted RBP12.06□□□□□ -0.48
PRKCH-203ENST00000552875 SLC10A3P09131 477 aa12.06□□□□□ -0.48
PRKCH-203ENST00000552875 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
PRKCH-203ENST00000552875 NOM1Q5C9Z4 860 aaKnown RBP12.06□□□□□ -0.48
PRKCH-203ENST00000552875 TPTE2Q6XPS3 522 aa12.06□□□□□ -0.48
PRKCH-203ENST00000552875 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
PRKCH-203ENST00000552875 SLC52A2Q9HAB3 445 aa12.06□□□□□ -0.48
PRKCH-203ENST00000552875 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
PRKCH-203ENST00000552875 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
PRKCH-203ENST00000552875 USP48Q86UV5 1035 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms