RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 SKAP1Q86WV1 359 aa18.29■□□□□ 0.52
LETMD1-235ENST00000552739 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
LETMD1-235ENST00000552739 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
LETMD1-235ENST00000552739 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
LETMD1-235ENST00000552739 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
LETMD1-235ENST00000552739 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
LETMD1-235ENST00000552739 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
LETMD1-235ENST00000552739 A1BGP04217 495 aa18.28■□□□□ 0.52
LETMD1-235ENST00000552739 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
LETMD1-235ENST00000552739 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
LETMD1-235ENST00000552739 ZPR1O75312 459 aa18.27■□□□□ 0.52
LETMD1-235ENST00000552739 USPL1Q5W0Q7 1092 aa18.27■□□□□ 0.52
LETMD1-235ENST00000552739 C10orf71Q711Q0 1435 aa18.27■□□□□ 0.51
LETMD1-235ENST00000552739 A0A087WZG4 1122 aa18.26■□□□□ 0.51
LETMD1-235ENST00000552739 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-235ENST00000552739 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
LETMD1-235ENST00000552739 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
LETMD1-235ENST00000552739 IGHDP01880 384 aa18.25■□□□□ 0.51
LETMD1-235ENST00000552739 CHL1O00533 1208 aa18.24■□□□□ 0.51
LETMD1-235ENST00000552739 BCL2L12Q9HB09 334 aa18.24■□□□□ 0.51
LETMD1-235ENST00000552739 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-235ENST00000552739 IL16Q14005 1332 aa18.24■□□□□ 0.51
LETMD1-235ENST00000552739 PIP4K2AP48426 406 aaPredicted RBP18.23■□□□□ 0.51
LETMD1-235ENST00000552739 ZNF330Q9Y3S2 320 aaPredicted RBP18.23■□□□□ 0.51
LETMD1-235ENST00000552739 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
LETMD1-235ENST00000552739 BRCA1P38398 1863 aaKnown RBP18.23■□□□□ 0.51
LETMD1-235ENST00000552739 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
LETMD1-235ENST00000552739 RGS3P49796 1198 aa18.23■□□□□ 0.51
LETMD1-235ENST00000552739 DDR1Q08345 913 aa18.23■□□□□ 0.51
LETMD1-235ENST00000552739 NFKBIBQ15653 356 aa18.23■□□□□ 0.51
LETMD1-235ENST00000552739 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
LETMD1-235ENST00000552739 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
LETMD1-235ENST00000552739 TM4SF1P30408 202 aa18.22■□□□□ 0.51
LETMD1-235ENST00000552739 CFAP44Q96MT7 982 aa18.21■□□□□ 0.51
LETMD1-235ENST00000552739 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
LETMD1-235ENST00000552739 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
LETMD1-235ENST00000552739 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
LETMD1-235ENST00000552739 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 COG6Q9Y2V7 657 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 ERBB4Q15303 1308 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 NFIXQ14938 502 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 DZIP3Q86Y13 1208 aaKnown RBP18.2■□□□□ 0.5
LETMD1-235ENST00000552739 PANK1Q8TE04 598 aa18.2■□□□□ 0.5
LETMD1-235ENST00000552739 DLEC1Q9Y238 1755 aa18.19■□□□□ 0.5
LETMD1-235ENST00000552739 NUP98P52948 1817 aa18.19■□□□□ 0.5
LETMD1-235ENST00000552739 RWDD1Q9H446 243 aaPredicted RBP18.19■□□□□ 0.5
LETMD1-235ENST00000552739 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
LETMD1-235ENST00000552739 GSE1Q14687 1217 aa18.18■□□□□ 0.5
LETMD1-235ENST00000552739 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
LETMD1-235ENST00000552739 CHD4Q14839 1912 aa18.18■□□□□ 0.5
LETMD1-235ENST00000552739 BECN1Q14457 450 aa18.18■□□□□ 0.5
LETMD1-235ENST00000552739 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
LETMD1-235ENST00000552739 RGL2O15211 777 aa18.17■□□□□ 0.5
LETMD1-235ENST00000552739 GNAI1P63096 354 aa18.17■□□□□ 0.5
LETMD1-235ENST00000552739 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
LETMD1-235ENST00000552739 CARMIL3Q8ND23 1372 aa18.16■□□□□ 0.5
LETMD1-235ENST00000552739 MVPQ14764 893 aaKnown RBP18.16■□□□□ 0.5
LETMD1-235ENST00000552739 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
LETMD1-235ENST00000552739 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
LETMD1-235ENST00000552739 ANKRD36CQ5JPF3 1778 aa18.15■□□□□ 0.5
LETMD1-235ENST00000552739 HOXB7P09629 217 aa18.15■□□□□ 0.5
LETMD1-235ENST00000552739 TGFB2P61812 414 aa18.15■□□□□ 0.5
LETMD1-235ENST00000552739 ARFGEF1Q9Y6D6 1849 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 MYL6BP14649 208 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 EIF2S2P20042 333 aaKnown RBP18.14■□□□□ 0.49
LETMD1-235ENST00000552739 PDIA6Q15084 440 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 GPR162Q16538 588 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 CLEC4GQ6UXB4 293 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 BICDL1Q6ZP65 573 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
LETMD1-235ENST00000552739 COL11A2P13942 1736 aaPredicted RBP18.14■□□□□ 0.49
LETMD1-235ENST00000552739 GOLGB1Q14789 3259 aaKnown RBP18.13■□□□□ 0.49
LETMD1-235ENST00000552739 SERPINB2P05120 415 aa18.13■□□□□ 0.49
LETMD1-235ENST00000552739 RLBP1P12271 317 aa18.13■□□□□ 0.49
LETMD1-235ENST00000552739 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.495e-13■■□□□ 14.4
LETMD1-235ENST00000552739 LRP10Q7Z4F1 713 aa18.13■□□□□ 0.49
LETMD1-235ENST00000552739 FRAT1Q92837 279 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-235ENST00000552739 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
LETMD1-235ENST00000552739 HDAC1Q13547 482 aaPredicted RBP18.12■□□□□ 0.49
LETMD1-235ENST00000552739 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
LETMD1-235ENST00000552739 PROSER3Q2NL68 480 aa18.12■□□□□ 0.49
LETMD1-235ENST00000552739 MAP3K15Q6ZN16 1313 aa18.12■□□□□ 0.49
LETMD1-235ENST00000552739 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
LETMD1-235ENST00000552739 ERVV-1B6SEH8 477 aa18.11■□□□□ 0.49
LETMD1-235ENST00000552739 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
LETMD1-235ENST00000552739 TTLL7Q6ZT98 887 aa18.11■□□□□ 0.49
LETMD1-235ENST00000552739 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
LETMD1-235ENST00000552739 TBC1D32Q96NH3 1257 aa18.11■□□□□ 0.49
LETMD1-235ENST00000552739 SETDB2Q96T68 719 aa18.11■□□□□ 0.49
LETMD1-235ENST00000552739 UTRNP46939 3433 aa18.1■□□□□ 0.49
LETMD1-235ENST00000552739 HDGFL1Q5TGJ6 251 aa18.1■□□□□ 0.49
LETMD1-235ENST00000552739 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
LETMD1-235ENST00000552739 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 DPEP1P16444 411 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
LETMD1-235ENST00000552739 HLFQ16534 295 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms