RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.21
LINC00661-206ENST00000552608 PIP4K2AP48426 406 aaPredicted RBP13.71□□□□□ -0.21
LINC00661-206ENST00000552608 LRP10Q7Z4F1 713 aa13.71□□□□□ -0.21
LINC00661-206ENST00000552608 MEIS3Q99687 375 aa13.71□□□□□ -0.21
LINC00661-206ENST00000552608 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
LINC00661-206ENST00000552608 SLC4A9Q96Q91 983 aa13.7□□□□□ -0.22
LINC00661-206ENST00000552608 MYD88Q99836 296 aa13.7□□□□□ -0.22
LINC00661-206ENST00000552608 C1orf115Q9H7X2 142 aa13.7□□□□□ -0.22
LINC00661-206ENST00000552608 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
LINC00661-206ENST00000552608 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
LINC00661-206ENST00000552608 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
LINC00661-206ENST00000552608 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
LINC00661-206ENST00000552608 IGHDP01880 384 aa13.69□□□□□ -0.22
LINC00661-206ENST00000552608 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
LINC00661-206ENST00000552608 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
LINC00661-206ENST00000552608 GCC1Q96CN9 775 aa13.69□□□□□ -0.22
LINC00661-206ENST00000552608 FAM182BQ5T319 152 aa13.68□□□□□ -0.22
LINC00661-206ENST00000552608 USP44Q9H0E7 712 aa13.68□□□□□ -0.22
LINC00661-206ENST00000552608 ZBTB1Q9Y2K1 713 aa13.68□□□□□ -0.22
LINC00661-206ENST00000552608 NUP98P52948 1817 aa13.68□□□□□ -0.22
LINC00661-206ENST00000552608 A0A087WZG4 1122 aa13.67□□□□□ -0.22
LINC00661-206ENST00000552608 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
LINC00661-206ENST00000552608 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
LINC00661-206ENST00000552608 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
LINC00661-206ENST00000552608 ARXQ96QS3 562 aa13.67□□□□□ -0.22
LINC00661-206ENST00000552608 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
LINC00661-206ENST00000552608 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
LINC00661-206ENST00000552608 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
LINC00661-206ENST00000552608 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
LINC00661-206ENST00000552608 NEURL1BA8MQ27 555 aa13.66□□□□□ -0.22
LINC00661-206ENST00000552608 GRM8O00222 908 aa13.66□□□□□ -0.22
LINC00661-206ENST00000552608 ITPK1Q13572 414 aa13.66□□□□□ -0.22
LINC00661-206ENST00000552608 CWF19L2Q2TBE0 894 aaKnown RBP13.66□□□□□ -0.22
LINC00661-206ENST00000552608 ZBTB3Q9H5J0 574 aa13.66□□□□□ -0.22
LINC00661-206ENST00000552608 UTYO14607 1347 aa13.65□□□□□ -0.22
LINC00661-206ENST00000552608 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
LINC00661-206ENST00000552608 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
LINC00661-206ENST00000552608 GCKRQ14397 625 aa13.65□□□□□ -0.22
LINC00661-206ENST00000552608 RC3H1Q5TC82 1133 aaKnown RBP13.65□□□□□ -0.22
LINC00661-206ENST00000552608 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
LINC00661-206ENST00000552608 SMC5Q8IY18 1101 aa13.65□□□□□ -0.22
LINC00661-206ENST00000552608 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
LINC00661-206ENST00000552608 CWC25Q9NXE8 425 aaPredicted RBP13.65□□□□□ -0.22
LINC00661-206ENST00000552608 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
LINC00661-206ENST00000552608 BCORQ6W2J9 1755 aa13.65□□□□□ -0.22
LINC00661-206ENST00000552608 IGKV5-2P06315 115 aa13.64□□□□□ -0.23
LINC00661-206ENST00000552608 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
LINC00661-206ENST00000552608 ATP8B2P98198 1209 aa13.64□□□□□ -0.23
LINC00661-206ENST00000552608 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
LINC00661-206ENST00000552608 INTS5Q6P9B9 1019 aaKnown RBP13.64□□□□□ -0.23
LINC00661-206ENST00000552608 GIGYF2Q6Y7W6 1299 aaKnown RBP13.64□□□□□ -0.23
LINC00661-206ENST00000552608 COL15A1P39059 1388 aa13.63□□□□□ -0.23
LINC00661-206ENST00000552608 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
LINC00661-206ENST00000552608 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
LINC00661-206ENST00000552608 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
LINC00661-206ENST00000552608 ZNF652Q9Y2D9 606 aa13.63□□□□□ -0.23
LINC00661-206ENST00000552608 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
LINC00661-206ENST00000552608 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
LINC00661-206ENST00000552608 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
LINC00661-206ENST00000552608 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
LINC00661-206ENST00000552608 TRIM37O94972 964 aa13.62□□□□□ -0.23
LINC00661-206ENST00000552608 TRIM28Q13263 835 aaKnown RBP13.62□□□□□ -0.23
LINC00661-206ENST00000552608 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
LINC00661-206ENST00000552608 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
LINC00661-206ENST00000552608 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
LINC00661-206ENST00000552608 SCN7AQ01118 1682 aa13.61□□□□□ -0.23
LINC00661-206ENST00000552608 RGL2O15211 777 aa13.61□□□□□ -0.23
LINC00661-206ENST00000552608 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
LINC00661-206ENST00000552608 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
LINC00661-206ENST00000552608 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
LINC00661-206ENST00000552608 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
LINC00661-206ENST00000552608 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
LINC00661-206ENST00000552608 MTX1Q13505 466 aa13.6□□□□□ -0.23
LINC00661-206ENST00000552608 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
LINC00661-206ENST00000552608 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
LINC00661-206ENST00000552608 AK7Q96M32 723 aa13.6□□□□□ -0.23
LINC00661-206ENST00000552608 TNS1Q9HBL0 1735 aaKnown RBP13.6□□□□□ -0.23
LINC00661-206ENST00000552608 TBC1D2BQ9UPU7 963 aa13.6□□□□□ -0.23
LINC00661-206ENST00000552608 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
LINC00661-206ENST00000552608 SRGAP3O43295 1099 aa13.59□□□□□ -0.23
LINC00661-206ENST00000552608 NUCB1Q02818 461 aa13.59□□□□□ -0.23
LINC00661-206ENST00000552608 ANKRD45Q5TZF3 282 aa13.59□□□□□ -0.23
LINC00661-206ENST00000552608 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
LINC00661-206ENST00000552608 PPP1R42Q7Z4L9 355 aa13.59□□□□□ -0.23
LINC00661-206ENST00000552608 CHD1LQ86WJ1 897 aa13.59□□□□□ -0.23
LINC00661-206ENST00000552608 SUCLG2Q96I99 432 aa13.59□□□□□ -0.23
LINC00661-206ENST00000552608 MYH3P11055 1940 aa13.58□□□□□ -0.23
LINC00661-206ENST00000552608 H7C1W4 665 aa13.58□□□□□ -0.24
LINC00661-206ENST00000552608 PLSCR1O15162 318 aa13.58□□□□□ -0.24
LINC00661-206ENST00000552608 GNPATO15228 680 aa13.58□□□□□ -0.24
LINC00661-206ENST00000552608 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
LINC00661-206ENST00000552608 HSP90B1P14625 803 aaKnown RBP13.58□□□□□ -0.24
LINC00661-206ENST00000552608 RGS3P49796 1198 aa13.58□□□□□ -0.24
LINC00661-206ENST00000552608 PARP10Q53GL7 1025 aa13.58□□□□□ -0.24
LINC00661-206ENST00000552608 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
LINC00661-206ENST00000552608 UBR3Q6ZT12 1888 aa13.58□□□□□ -0.24
LINC00661-206ENST00000552608 C4AP0C0L4 1744 aa13.57□□□□□ -0.24
LINC00661-206ENST00000552608 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
LINC00661-206ENST00000552608 RAB11FIP3O75154 756 aa13.57□□□□□ -0.24
LINC00661-206ENST00000552608 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms