RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 GNPATO15228 680 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 LMNB1P20700 586 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 MPRIPQ6WCQ1 1025 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 DCAF11Q8TEB1 546 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
PRIM1-208ENST00000552590 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 LTN1O94822 1766 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 CASP8AP2Q9UKL3 1982 aa12.17□□□□□ -0.46
PRIM1-208ENST00000552590 TMF1P82094 1093 aa12.16□□□□□ -0.46
PRIM1-208ENST00000552590 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
PRIM1-208ENST00000552590 ZNF454Q8N9F8 522 aa12.16□□□□□ -0.46
PRIM1-208ENST00000552590 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
PRIM1-208ENST00000552590 CHRNA5P30532 468 aa12.15□□□□□ -0.46
PRIM1-208ENST00000552590 NLGN1Q8N2Q7 840 aa12.15□□□□□ -0.46
PRIM1-208ENST00000552590 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
PRIM1-208ENST00000552590 WDR33Q9C0J8 1336 aaKnown RBP12.15□□□□□ -0.46
PRIM1-208ENST00000552590 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
PRIM1-208ENST00000552590 TIAM2Q8IVF5 1701 aa12.15□□□□□ -0.47
PRIM1-208ENST00000552590 PTPREP23469 700 aa12.14□□□□□ -0.47
PRIM1-208ENST00000552590 DEFB115Q30KQ5 88 aa12.14□□□□□ -0.47
PRIM1-208ENST00000552590 PARP3Q9Y6F1 533 aa12.14□□□□□ -0.47
PRIM1-208ENST00000552590 TTC21AQ8NDW8 1320 aa12.14□□□□□ -0.47
PRIM1-208ENST00000552590 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
PRIM1-208ENST00000552590 SOX10P56693 466 aa12.14□□□□□ -0.47
PRIM1-208ENST00000552590 PPP1R37O75864 691 aa12.13□□□□□ -0.47
PRIM1-208ENST00000552590 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
PRIM1-208ENST00000552590 BEGAINQ9BUH8 593 aa12.13□□□□□ -0.47
PRIM1-208ENST00000552590 MEGF6O75095 1541 aa12.13□□□□□ -0.47
PRIM1-208ENST00000552590 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
PRIM1-208ENST00000552590 ITPK1Q13572 414 aa12.11□□□□□ -0.47
PRIM1-208ENST00000552590 DGKZQ13574 1117 aa12.11□□□□□ -0.47
PRIM1-208ENST00000552590 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
PRIM1-208ENST00000552590 SZT2Q5T011 3432 aa12.11□□□□□ -0.47
PRIM1-208ENST00000552590 MAP2P11137 1827 aaKnown RBP12.1□□□□□ -0.47
PRIM1-208ENST00000552590 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
PRIM1-208ENST00000552590 GFRA3O60609 400 aa12.1□□□□□ -0.47
PRIM1-208ENST00000552590 GYS1P13807 737 aa12.1□□□□□ -0.47
PRIM1-208ENST00000552590 SIK1P57059 783 aa12.1□□□□□ -0.47
PRIM1-208ENST00000552590 TRAPPC3LQ5T215 181 aa12.1□□□□□ -0.47
PRIM1-208ENST00000552590 FAM208AQ9UK61 1670 aaKnown RBP12.09□□□□□ -0.47
PRIM1-208ENST00000552590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.09□□□□□ -0.47
PRIM1-208ENST00000552590 RGPD2P0DJD1 1756 aa12.09□□□□□ -0.47
PRIM1-208ENST00000552590 DSG2Q14126 1118 aa12.08□□□□□ -0.47
PRIM1-208ENST00000552590 LDHDQ86WU2 507 aa12.08□□□□□ -0.47
PRIM1-208ENST00000552590 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.47
PRIM1-208ENST00000552590 ITGB4P16144 1822 aa12.08□□□□□ -0.47
PRIM1-208ENST00000552590 CENPJQ9HC77 1338 aaPredicted RBP12.08□□□□□ -0.48
PRIM1-208ENST00000552590 NFKBIEO00221 500 aa12.08□□□□□ -0.48
PRIM1-208ENST00000552590 GRM1Q13255 1194 aa12.08□□□□□ -0.48
PRIM1-208ENST00000552590 NME9Q86XW9 330 aa12.08□□□□□ -0.48
PRIM1-208ENST00000552590 PIGBQ92521 554 aa12.08□□□□□ -0.48
PRIM1-208ENST00000552590 IP6K1Q92551 441 aa12.08□□□□□ -0.48
PRIM1-208ENST00000552590 ABT1Q9ULW3 272 aaKnown RBP12.08□□□□□ -0.48
PRIM1-208ENST00000552590 USP31Q70CQ4 1352 aa12.07□□□□□ -0.48
PRIM1-208ENST00000552590 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
PRIM1-208ENST00000552590 DLL1O00548 723 aa12.07□□□□□ -0.48
PRIM1-208ENST00000552590 DDNO94850 711 aaPredicted RBP12.07□□□□□ -0.48
PRIM1-208ENST00000552590 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
PRIM1-208ENST00000552590 HABP4Q5JVS0 413 aaKnown RBP12.07□□□□□ -0.48
PRIM1-208ENST00000552590 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
PRIM1-208ENST00000552590 FOSBP53539 338 aa12.06□□□□□ -0.48
PRIM1-208ENST00000552590 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
PRIM1-208ENST00000552590 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
PRIM1-208ENST00000552590 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
PRIM1-208ENST00000552590 CAPNS2Q96L46 248 aa12.06□□□□□ -0.48
PRIM1-208ENST00000552590 GPR101Q96P66 508 aaPredicted RBP12.06□□□□□ -0.48
PRIM1-208ENST00000552590 LTBP1Q14766 1721 aa12.06□□□□□ -0.48
PRIM1-208ENST00000552590 MKI67P46013 3256 aaKnown RBP12.05□□□□□ -0.48
PRIM1-208ENST00000552590 KCNC4Q03721 635 aa12.05□□□□□ -0.48
PRIM1-208ENST00000552590 DDR1Q08345 913 aa12.05□□□□□ -0.48
PRIM1-208ENST00000552590 NBPF1Q3BBV0 1214 aa12.05□□□□□ -0.48
PRIM1-208ENST00000552590 ERFEQ4G0M1 354 aa12.05□□□□□ -0.48
PRIM1-208ENST00000552590 THSD7BQ9C0I4 1608 aa12.05□□□□□ -0.48
PRIM1-208ENST00000552590 RFC4P35249 363 aa12.04□□□□□ -0.48
PRIM1-208ENST00000552590 EAPPQ56P03 285 aaPredicted RBP12.04□□□□□ -0.48
PRIM1-208ENST00000552590 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
PRIM1-208ENST00000552590 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
PRIM1-208ENST00000552590 OXER1Q8TDS5 423 aa12.04□□□□□ -0.48
PRIM1-208ENST00000552590 TAF1DQ9H5J8 278 aaPredicted RBP12.04□□□□□ -0.48
PRIM1-208ENST00000552590 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
PRIM1-208ENST00000552590 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
PRIM1-208ENST00000552590 CYP27B1O15528 508 aa12.02□□□□□ -0.48
PRIM1-208ENST00000552590 NYAP1Q6ZVC0 841 aa12.02□□□□□ -0.48
PRIM1-208ENST00000552590 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
PRIM1-208ENST00000552590 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
PRIM1-208ENST00000552590 AOC2O75106 756 aa12.02□□□□□ -0.49
PRIM1-208ENST00000552590 NBPF6Q5VWK0 638 aa12.02□□□□□ -0.49
PRIM1-208ENST00000552590 RAPGEF4Q8WZA2 1011 aa12.02□□□□□ -0.49
PRIM1-208ENST00000552590 NBPF4Q96M43 638 aa12.02□□□□□ -0.49
PRIM1-208ENST00000552590 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
PRIM1-208ENST00000552590 IQCA1LA6NCM1 817 aa12.01□□□□□ -0.49
PRIM1-208ENST00000552590 ECE1P42892 770 aa12.01□□□□□ -0.49
PRIM1-208ENST00000552590 MAP1SQ66K74 1059 aaPredicted RBP12.01□□□□□ -0.49
PRIM1-208ENST00000552590 CNTROBQ8N137 903 aa12.01□□□□□ -0.49
PRIM1-208ENST00000552590 TTLL6Q8N841 843 aa12.01□□□□□ -0.49
PRIM1-208ENST00000552590 SRP68Q9UHB9 627 aaKnown RBP12.01□□□□□ -0.49
PRIM1-208ENST00000552590 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
PRIM1-208ENST00000552590 EVC2Q86UK5 1308 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms