RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
PTCH1-225ENST00000551845 TM4SF1P30408 202 aa13.72□□□□□ -0.21
PTCH1-225ENST00000551845 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
PTCH1-225ENST00000551845 C16orf71Q8IYS4 520 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-225ENST00000551845 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
PTCH1-225ENST00000551845 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
PTCH1-225ENST00000551845 DBF4Q9UBU7 674 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-225ENST00000551845 PDIA6Q15084 440 aa13.71□□□□□ -0.21
PTCH1-225ENST00000551845 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.21
PTCH1-225ENST00000551845 TNS4Q8IZW8 715 aa13.71□□□□□ -0.21
PTCH1-225ENST00000551845 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.21
PTCH1-225ENST00000551845 NMRK2Q9NPI5 230 aa13.71□□□□□ -0.21
PTCH1-225ENST00000551845 DDX21Q9NR30 783 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTCH1-225ENST00000551845 BCS1LQ9Y276 419 aa13.71□□□□□ -0.21
PTCH1-225ENST00000551845 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.21
PTCH1-225ENST00000551845 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 ERVV-1B6SEH8 477 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 HTRA3P83110 453 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 NFIXQ14938 502 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 CCDC30Q5VVM6 783 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 KIF6Q6ZMV9 814 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 KLRG1Q96E93 195 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
PTCH1-225ENST00000551845 SIPA1L3O60292 1781 aaPredicted RBP13.7□□□□□ -0.22
PTCH1-225ENST00000551845 DLG5Q8TDM6 1919 aa13.7□□□□□ -0.22
PTCH1-225ENST00000551845 RGL2O15211 777 aa13.69□□□□□ -0.22
PTCH1-225ENST00000551845 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
PTCH1-225ENST00000551845 TWISTNBQ3B726 338 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-225ENST00000551845 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
PTCH1-225ENST00000551845 TSPYL6Q8N831 410 aa13.69□□□□□ -0.22
PTCH1-225ENST00000551845 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-225ENST00000551845 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
PTCH1-225ENST00000551845 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 E9PSI1 815 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 ANXA1P04083 346 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 SERPINB2P05120 415 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
PTCH1-225ENST00000551845 TBC1D9BQ66K14 1250 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
PTCH1-225ENST00000551845 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-225ENST00000551845 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
PTCH1-225ENST00000551845 TJP1Q07157 1748 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 POLRMTO00411 1230 aaKnown RBP13.67□□□□□ -0.22
PTCH1-225ENST00000551845 VAMP4O75379 141 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 HLFQ16534 295 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 PROSER3Q2NL68 480 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 STK31Q9BXU1 1019 aa13.67□□□□□ -0.22
PTCH1-225ENST00000551845 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
PTCH1-225ENST00000551845 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 PRELPP51888 382 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 TGFB2P61812 414 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 DDR1Q08345 913 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 JMYQ8N9B5 988 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 ZBTB3Q9H5J0 574 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCH1-225ENST00000551845 PXDNLA1KZ92 1463 aa13.66□□□□□ -0.22
PTCH1-225ENST00000551845 COL5A3P25940 1745 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-225ENST00000551845 VIRMAQ69YN4 1812 aaKnown RBP13.65□□□□□ -0.22
PTCH1-225ENST00000551845 NPHP1O15259 732 aa13.65□□□□□ -0.22
PTCH1-225ENST00000551845 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTCH1-225ENST00000551845 FSTL1Q12841 308 aa13.65□□□□□ -0.22
PTCH1-225ENST00000551845 TPTE2Q6XPS3 522 aa13.65□□□□□ -0.22
PTCH1-225ENST00000551845 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
PTCH1-225ENST00000551845 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
PTCH1-225ENST00000551845 GTF2E1P29083 439 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-225ENST00000551845 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
PTCH1-225ENST00000551845 C9orf131Q5VYM1 1079 aa13.64□□□□□ -0.23
PTCH1-225ENST00000551845 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
PTCH1-225ENST00000551845 KIF13BQ9NQT8 1826 aa13.63□□□□□ -0.23
PTCH1-225ENST00000551845 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
PTCH1-225ENST00000551845 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
PTCH1-225ENST00000551845 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
PTCH1-225ENST00000551845 NBPF5PQ86XG9 351 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-225ENST00000551845 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
PTCH1-225ENST00000551845 PHAXQ9H814 394 aaKnown RBP13.63□□□□□ -0.23
PTCH1-225ENST00000551845 KDM3BQ7LBC6 1761 aa13.63□□□□□ -0.23
PTCH1-225ENST00000551845 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
PTCH1-225ENST00000551845 KIAA1551Q9HCM1 1747 aa13.62□□□□□ -0.23
PTCH1-225ENST00000551845 DPEP1P16444 411 aa13.62□□□□□ -0.23
PTCH1-225ENST00000551845 TCIRG1Q13488 830 aa13.62□□□□□ -0.23
PTCH1-225ENST00000551845 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
PTCH1-225ENST00000551845 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 GPTP24298 496 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 ST5P78524 1137 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 PARP10Q53GL7 1025 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
PTCH1-225ENST00000551845 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms