RNA–Protein interactions for RNA: ENST00000551630.1

PTCH1-224, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-224ENST00000551630 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
PTCH1-224ENST00000551630 MAP3K15Q6ZN16 1313 aa19.65■□□□□ 0.74
PTCH1-224ENST00000551630 G2E3Q7L622 706 aa19.64■□□□□ 0.73
PTCH1-224ENST00000551630 SPON1Q9HCB6 807 aa19.64■□□□□ 0.73
PTCH1-224ENST00000551630 COL24A1Q17RW2 1714 aa19.63■□□□□ 0.73
PTCH1-224ENST00000551630 HLFQ16534 295 aa19.63■□□□□ 0.73
PTCH1-224ENST00000551630 BCL2L13Q9BXK5 485 aa19.63■□□□□ 0.73
PTCH1-224ENST00000551630 PTGER2P43116 358 aa19.62■□□□□ 0.73
PTCH1-224ENST00000551630 TBC1D9BQ66K14 1250 aa19.62■□□□□ 0.73
PTCH1-224ENST00000551630 BICDL1Q6ZP65 573 aa19.62■□□□□ 0.73
PTCH1-224ENST00000551630 NLGN1Q8N2Q7 840 aa19.62■□□□□ 0.73
PTCH1-224ENST00000551630 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
PTCH1-224ENST00000551630 MMP10P09238 476 aa19.61■□□□□ 0.73
PTCH1-224ENST00000551630 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
PTCH1-224ENST00000551630 SGIP1Q9BQI5 828 aa19.61■□□□□ 0.73
PTCH1-224ENST00000551630 ERVV-1B6SEH8 477 aa19.6■□□□□ 0.73
PTCH1-224ENST00000551630 DDR1Q08345 913 aa19.6■□□□□ 0.73
PTCH1-224ENST00000551630 FLIIQ13045 1269 aa19.6■□□□□ 0.73
PTCH1-224ENST00000551630 NFIXQ14938 502 aa19.6■□□□□ 0.73
PTCH1-224ENST00000551630 ZNF652Q9Y2D9 606 aa19.6■□□□□ 0.73
PTCH1-224ENST00000551630 LRP5O75197 1615 aa19.59■□□□□ 0.73
PTCH1-224ENST00000551630 POLD1P28340 1107 aa19.59■□□□□ 0.73
PTCH1-224ENST00000551630 MRPL50Q8N5N7 158 aaKnown RBP19.59■□□□□ 0.73
PTCH1-224ENST00000551630 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
PTCH1-224ENST00000551630 ZNF428Q96B54 188 aa19.59■□□□□ 0.73
PTCH1-224ENST00000551630 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
PTCH1-224ENST00000551630 ARFGEF2Q9Y6D5 1785 aa19.58■□□□□ 0.73
PTCH1-224ENST00000551630 ALDH1L2Q3SY69 923 aa19.58■□□□□ 0.72
PTCH1-224ENST00000551630 CLEC4GQ6UXB4 293 aa19.58■□□□□ 0.72
PTCH1-224ENST00000551630 GIGYF2Q6Y7W6 1299 aaKnown RBP19.58■□□□□ 0.72
PTCH1-224ENST00000551630 ANKRD13DQ6ZTN6 518 aa19.58■□□□□ 0.72
PTCH1-224ENST00000551630 NUP98P52948 1817 aa19.58■□□□□ 0.72
PTCH1-224ENST00000551630 TM4SF1P30408 202 aa19.57■□□□□ 0.72
PTCH1-224ENST00000551630 RARSP54136 660 aaKnown RBP19.57■□□□□ 0.72
PTCH1-224ENST00000551630 FKBP5Q13451 457 aaPredicted RBP19.57■□□□□ 0.72
PTCH1-224ENST00000551630 RIC3Q7Z5B4 369 aa19.57■□□□□ 0.72
PTCH1-224ENST00000551630 ATP10DQ9P241 1426 aa19.57■□□□□ 0.72
PTCH1-224ENST00000551630 ADCY9O60503 1353 aa19.57■□□□□ 0.72
PTCH1-224ENST00000551630 CACNA1FO60840 1977 aa19.56■□□□□ 0.72
PTCH1-224ENST00000551630 POLRMTO00411 1230 aaKnown RBP19.56■□□□□ 0.72
PTCH1-224ENST00000551630 RGL2O15211 777 aa19.56■□□□□ 0.72
PTCH1-224ENST00000551630 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
PTCH1-224ENST00000551630 GPTP24298 496 aa19.56■□□□□ 0.72
PTCH1-224ENST00000551630 NIP7Q9Y221 180 aaKnown RBP eCLIP19.56■□□□□ 0.72
PTCH1-224ENST00000551630 PARP3Q9Y6F1 533 aa19.56■□□□□ 0.72
PTCH1-224ENST00000551630 PI4KAP2A4QPH2 592 aa19.55■□□□□ 0.72
PTCH1-224ENST00000551630 PI4KAP1Q8N8J0 262 aa19.55■□□□□ 0.72
PTCH1-224ENST00000551630 MAP3K2Q9Y2U5 619 aa19.55■□□□□ 0.72
PTCH1-224ENST00000551630 ANKRD36CQ5JPF3 1778 aa19.55■□□□□ 0.72
PTCH1-224ENST00000551630 UBN2Q6ZU65 1347 aa19.54■□□□□ 0.72
PTCH1-224ENST00000551630 KSR2Q6VAB6 950 aa19.54■□□□□ 0.72
PTCH1-224ENST00000551630 SETDB2Q96T68 719 aa19.54■□□□□ 0.72
PTCH1-224ENST00000551630 CARMIL3Q8ND23 1372 aa19.54■□□□□ 0.72
PTCH1-224ENST00000551630 FAM177BA6PVY3 158 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 BCAR3O75815 825 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 SERPINB2P05120 415 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 TCIRG1Q13488 830 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 HSP90AB3PQ58FF7 597 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 ZNF34Q8IZ26 560 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 MYD88Q99836 296 aa19.53■□□□□ 0.72
PTCH1-224ENST00000551630 PPP1R1BQ9UD71 204 aaPredicted RBP19.53■□□□□ 0.72
PTCH1-224ENST00000551630 F6X3S4 739 aa19.52■□□□□ 0.72
PTCH1-224ENST00000551630 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
PTCH1-224ENST00000551630 AFDNP55196 1824 aaKnown RBP19.51■□□□□ 0.71
PTCH1-224ENST00000551630 METTL22Q9BUU2 404 aaPredicted RBP19.51■□□□□ 0.71
PTCH1-224ENST00000551630 NRXN2Q9P2S2 1712 aa19.51■□□□□ 0.71
PTCH1-224ENST00000551630 SUSD4Q5VX71 490 aa19.5■□□□□ 0.71
PTCH1-224ENST00000551630 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
PTCH1-224ENST00000551630 CCDC24Q8N4L8 307 aa19.5■□□□□ 0.71
PTCH1-224ENST00000551630 DNAAF4Q8WXU2 420 aa19.5■□□□□ 0.71
PTCH1-224ENST00000551630 ISCA1Q9BUE6 129 aa19.5■□□□□ 0.71
PTCH1-224ENST00000551630 NOB1Q9ULX3 412 aaKnown RBP19.5■□□□□ 0.71
PTCH1-224ENST00000551630 C10orf71Q711Q0 1435 aa19.5■□□□□ 0.71
PTCH1-224ENST00000551630 PTPRCP08575 1304 aa19.5■□□□□ 0.71
PTCH1-224ENST00000551630 BRPF1P55201 1214 aaPredicted RBP19.49■□□□□ 0.71
PTCH1-224ENST00000551630 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
PTCH1-224ENST00000551630 NLRP10Q86W26 655 aa19.49■□□□□ 0.71
PTCH1-224ENST00000551630 NPHP1O15259 732 aa19.48■□□□□ 0.71
PTCH1-224ENST00000551630 PARP10Q53GL7 1025 aa19.48■□□□□ 0.71
PTCH1-224ENST00000551630 CNBD1Q8NA66 436 aa19.48■□□□□ 0.71
PTCH1-224ENST00000551630 KIF16BQ96L93 1317 aa19.48■□□□□ 0.71
PTCH1-224ENST00000551630 NTSR2O95665 410 aa19.47■□□□□ 0.71
PTCH1-224ENST00000551630 IGKV5-2P06315 115 aa19.47■□□□□ 0.71
PTCH1-224ENST00000551630 NEXNQ0ZGT2 675 aa19.47■□□□□ 0.71
PTCH1-224ENST00000551630 NUTM1Q86Y26 1132 aa19.47■□□□□ 0.71
PTCH1-224ENST00000551630 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
PTCH1-224ENST00000551630 FHDC1Q9C0D6 1143 aaPredicted RBP19.47■□□□□ 0.71
PTCH1-224ENST00000551630 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
PTCH1-224ENST00000551630 ABCC12Q96J65 1359 aa19.46■□□□□ 0.71
PTCH1-224ENST00000551630 IBTKQ9P2D0 1353 aaPredicted RBP19.46■□□□□ 0.71
PTCH1-224ENST00000551630 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
PTCH1-224ENST00000551630 SLC4A10Q6U841 1118 aa19.46■□□□□ 0.71
PTCH1-224ENST00000551630 PPP1R42Q7Z4L9 355 aa19.46■□□□□ 0.71
PTCH1-224ENST00000551630 NEURL1BA8MQ27 555 aa19.45■□□□□ 0.7
PTCH1-224ENST00000551630 ERFEQ4G0M1 354 aa19.45■□□□□ 0.7
PTCH1-224ENST00000551630 TPTE2Q6XPS3 522 aa19.45■□□□□ 0.7
PTCH1-224ENST00000551630 UTP14AQ9BVJ6 771 aaKnown RBP19.45■□□□□ 0.7
PTCH1-224ENST00000551630 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
PTCH1-224ENST00000551630 TNNQ9UQP3 1299 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms