RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 KSR2Q6VAB6 950 aa15.72■□□□□ 0.11
CACNB3-219ENST00000551544 USP48Q86UV5 1035 aa15.72■□□□□ 0.11
CACNB3-219ENST00000551544 ANKRD24Q8TF21 1146 aa15.72■□□□□ 0.11
CACNB3-219ENST00000551544 RGPD2P0DJD1 1756 aa15.71■□□□□ 0.11
CACNB3-219ENST00000551544 TTC14Q96N46 770 aa15.71■□□□□ 0.11
CACNB3-219ENST00000551544 PXDNQ92626 1479 aa15.71■□□□□ 0.11
CACNB3-219ENST00000551544 CASTP20810 708 aaKnown RBP15.71■□□□□ 0.1
CACNB3-219ENST00000551544 RUFY3Q7L099 469 aa15.71■□□□□ 0.1
CACNB3-219ENST00000551544 ECHDC1Q9NTX5 307 aa15.71■□□□□ 0.1
CACNB3-219ENST00000551544 DTNBO60941 627 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 ALDH1L1O75891 902 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 MTX1Q13505 466 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 KDM3BQ7LBC6 1761 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 PTH1RQ03431 593 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 AACSQ86V21 672 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 PDLIM2Q96JY6 352 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 LIMCH1Q9UPQ0 1083 aa15.7■□□□□ 0.1
CACNB3-219ENST00000551544 USP42Q9H9J4 1324 aaKnown RBP15.7■□□□□ 0.1
CACNB3-219ENST00000551544 RUFY2Q8WXA3 655 aa15.69■□□□□ 0.1
CACNB3-219ENST00000551544 SYAP1Q96A49 352 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-219ENST00000551544 GPATCH3Q96I76 525 aa15.69■□□□□ 0.1
CACNB3-219ENST00000551544 RPAP1Q9BWH6 1393 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-219ENST00000551544 PRPF40BQ6NWY9 871 aaKnown RBP15.69■□□□□ 0.1
CACNB3-219ENST00000551544 VSIG10Q8N0Z9 540 aa15.69■□□□□ 0.1
CACNB3-219ENST00000551544 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
CACNB3-219ENST00000551544 TSPY26PQ9H489 355 aa15.68■□□□□ 0.1
CACNB3-219ENST00000551544 JAKMIP1Q96N16 626 aaKnown RBP15.68■□□□□ 0.1
CACNB3-219ENST00000551544 SMC3Q9UQE7 1217 aa15.68■□□□□ 0.1
CACNB3-219ENST00000551544 CNPY2Q9Y2B0 182 aa15.68■□□□□ 0.1
CACNB3-219ENST00000551544 AXIN2Q9Y2T1 843 aa15.68■□□□□ 0.1
CACNB3-219ENST00000551544 ADGRL3Q9HAR2 1447 aa15.68■□□□□ 0.1
CACNB3-219ENST00000551544 LARGE1O95461 756 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 TERF1P54274 439 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 ADCK5Q3MIX3 580 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 ERC1Q8IUD2 1116 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 SUCLG2Q96I99 432 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-219ENST00000551544 GRM8O00222 908 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 SYT1P21579 422 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-219ENST00000551544 STX6O43752 255 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 OFD1O75665 1012 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 ZSCAN22P10073 491 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-219ENST00000551544 CCDC83Q8IWF9 413 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 ZMYND15Q9H091 742 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 CCDC8Q9H0W5 538 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-219ENST00000551544 SIL1Q9H173 461 aa15.67■□□□□ 0.1
CACNB3-219ENST00000551544 BICC1Q9H694 974 aaKnown RBP15.67■□□□□ 0.1
CACNB3-219ENST00000551544 LMO7Q8WWI1 1683 aa15.66■□□□□ 0.1
CACNB3-219ENST00000551544 CHD2O14647 1828 aaKnown RBP15.66■□□□□ 0.1
CACNB3-219ENST00000551544 G3BP1Q13283 466 aaKnown RBP eCLIP15.66■□□□□ 0.1
CACNB3-219ENST00000551544 LINS1Q8NG48 757 aa15.66■□□□□ 0.1
CACNB3-219ENST00000551544 PDCL3Q9H2J4 239 aa15.66■□□□□ 0.1
CACNB3-219ENST00000551544 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
CACNB3-219ENST00000551544 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
CACNB3-219ENST00000551544 SLC39A6Q13433 755 aa15.66■□□□□ 0.1
CACNB3-219ENST00000551544 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
CACNB3-219ENST00000551544 NOL7Q9UMY1 257 aaKnown RBP15.66■□□□□ 0.1
CACNB3-219ENST00000551544 DDX58O95786 925 aaKnown RBP15.65■□□□□ 0.1
CACNB3-219ENST00000551544 KCNJ4P48050 445 aa15.65■□□□□ 0.1
CACNB3-219ENST00000551544 KAZALD1Q96I82 304 aa15.65■□□□□ 0.1
CACNB3-219ENST00000551544 SASH1O94885 1247 aa15.65■□□□□ 0.1
CACNB3-219ENST00000551544 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
CACNB3-219ENST00000551544 RIC3Q7Z5B4 369 aa15.65■□□□□ 0.1
CACNB3-219ENST00000551544 EAF2Q96CJ1 260 aaPredicted RBP15.65■□□□□ 0.1
CACNB3-219ENST00000551544 FAM227BQ96M60 508 aa15.65■□□□□ 0.1
CACNB3-219ENST00000551544 NCAPD2Q15021 1401 aa15.64■□□□□ 0.09
CACNB3-219ENST00000551544 PHF14O94880 888 aa15.64■□□□□ 0.09
CACNB3-219ENST00000551544 MYL6BP14649 208 aa15.64■□□□□ 0.09
CACNB3-219ENST00000551544 ZC3H6P61129 1189 aaKnown RBP15.64■□□□□ 0.09
CACNB3-219ENST00000551544 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.64■□□□□ 0.09
CACNB3-219ENST00000551544 KLHDC4Q8TBB5 520 aa15.64■□□□□ 0.09
CACNB3-219ENST00000551544 DDX21Q9NR30 783 aaKnown RBP eCLIP15.64■□□□□ 0.09
CACNB3-219ENST00000551544 CYP46A1Q9Y6A2 500 aa15.64■□□□□ 0.09
CACNB3-219ENST00000551544 HEG1Q9ULI3 1381 aa15.64■□□□□ 0.09
CACNB3-219ENST00000551544 FIBPO43427 364 aa15.64■□□□□ 0.09
CACNB3-219ENST00000551544 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.64■□□□□ 0.09
CACNB3-219ENST00000551544 F13A1P00488 732 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 GJB2P29033 226 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
CACNB3-219ENST00000551544 CCDC171Q6TFL3 1326 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 NMIQ13287 307 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-219ENST00000551544 VPS53Q5VIR6 699 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 BOLA2Q9H3K6 86 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 RBM8AQ9Y5S9 174 aaKnown RBP15.63■□□□□ 0.09
CACNB3-219ENST00000551544 TCHHQ07283 1943 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 ZKSCAN1P17029 563 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-219ENST00000551544 PDIA6Q15084 440 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
CACNB3-219ENST00000551544 NECAB1Q8N987 351 aa15.62■□□□□ 0.09
CACNB3-219ENST00000551544 ZSWIM6Q9HCJ5 1215 aa15.62■□□□□ 0.09
CACNB3-219ENST00000551544 IGKV5-2P06315 115 aa15.62■□□□□ 0.09
CACNB3-219ENST00000551544 NECTIN1Q15223 517 aa15.62■□□□□ 0.09
CACNB3-219ENST00000551544 TMEM87AQ8NBN3 555 aa15.62■□□□□ 0.09
CACNB3-219ENST00000551544 PTMAP06454 111 aaKnown RBP15.61■□□□□ 0.09
CACNB3-219ENST00000551544 CREB3L3Q68CJ9 461 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 FSD1Q9BTV5 496 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms