RNA–Protein interactions for RNA: ENST00000551317.5

EFCAB2-216, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-216ENST00000551317 LAMB2P55268 1798 aa9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 NUP98P52948 1817 aa9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 HDAC1Q13547 482 aaPredicted RBP9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 NECTIN2Q92692 538 aa9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 SMARCC1Q92922 1105 aaPredicted RBP9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 PHAXQ9H814 394 aaKnown RBP9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 MYH14Q7Z406 1995 aaKnown RBP9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 PALLDQ8WX93 1383 aa9.73□□□□□ -0.85
EFCAB2-216ENST00000551317 PROSER3Q2NL68 480 aa9.72□□□□□ -0.85
EFCAB2-216ENST00000551317 KSR2Q6VAB6 950 aa9.72□□□□□ -0.85
EFCAB2-216ENST00000551317 DNAAF4Q8WXU2 420 aa9.72□□□□□ -0.85
EFCAB2-216ENST00000551317 ASAP1Q9ULH1 1129 aa9.72□□□□□ -0.85
EFCAB2-216ENST00000551317 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
EFCAB2-216ENST00000551317 C4AP0C0L4 1744 aa9.72□□□□□ -0.85
EFCAB2-216ENST00000551317 C4BP0C0L5 1744 aa9.72□□□□□ -0.85
EFCAB2-216ENST00000551317 F6X3S4 739 aa9.71□□□□□ -0.86
EFCAB2-216ENST00000551317 ALDH1L1O75891 902 aa9.71□□□□□ -0.86
EFCAB2-216ENST00000551317 PRIM1P49642 420 aaKnown RBP9.71□□□□□ -0.86
EFCAB2-216ENST00000551317 MKRN4PQ13434 485 aaPredicted RBP9.71□□□□□ -0.86
EFCAB2-216ENST00000551317 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
EFCAB2-216ENST00000551317 MYH3P11055 1940 aa9.71□□□□□ -0.86
EFCAB2-216ENST00000551317 A0A0G2JS52 829 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 PTCD1O75127 700 aaKnown RBP9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 STARD3NLO95772 234 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 ANXA1P04083 346 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 GNAI3P08754 354 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 BEND3Q5T5X7 828 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 SEPT12Q8IYM1 358 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 PI4KAP1Q8N8J0 262 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 SYTL4Q96C24 671 aaPredicted RBP9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 SRCIN1Q9C0H9 1055 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 RWDD1Q9H446 243 aaPredicted RBP9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 QTRT2Q9H974 415 aaKnown RBP9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 COL15A1P39059 1388 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 COL24A1Q17RW2 1714 aa9.7□□□□□ -0.86
EFCAB2-216ENST00000551317 NBPF26B4DH59 902 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 UTYO14607 1347 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 RBM6P78332 1123 aaKnown RBP9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 NBPF14Q5TI25 921 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 NBPF10Q6P3W6 841 aaKnown RBP9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 SLC4A10Q6U841 1118 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 UBR3Q6ZT12 1888 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 DNAJC10Q8IXB1 793 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 NBPF15Q8N660 670 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 LINS1Q8NG48 757 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 MEIS3Q99687 375 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 MAP3K2Q9Y2U5 619 aa9.69□□□□□ -0.86
EFCAB2-216ENST00000551317 CASZ1Q86V15 1759 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 LOC102724428A0A0B4J2F2 783 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 ABCB7O75027 752 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 CYP19A1P11511 503 aaPredicted RBP9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 MYL6BP14649 208 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 SIK1P57059 783 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 RPAP2Q8IXW5 612 aaPredicted RBP9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 SMC5Q8IY18 1101 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 PLBD2Q8NHP8 589 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 ACSBG1Q96GR2 724 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 METTL22Q9BUU2 404 aaPredicted RBP9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 TUBGCP6Q96RT7 1819 aa9.68□□□□□ -0.86
EFCAB2-216ENST00000551317 CNTNAP4Q9C0A0 1308 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 IGHDP01880 384 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 GNAI2P04899 355 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 IL6STP40189 918 aaPredicted RBP9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 NEXNQ0ZGT2 675 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 CEP85Q6P2H3 762 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 COPS6Q7L5N1 327 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 ANKRD44Q8N8A2 993 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 GCC1Q96CN9 775 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 HDAC5Q9UQL6 1122 aa9.67□□□□□ -0.86
EFCAB2-216ENST00000551317 QSER1Q2KHR3 1735 aa9.66□□□□□ -0.86
EFCAB2-216ENST00000551317 A1BGP04217 495 aa9.66□□□□□ -0.86
EFCAB2-216ENST00000551317 UBTFL1P0CB47 393 aaPredicted RBP9.66□□□□□ -0.86
EFCAB2-216ENST00000551317 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
EFCAB2-216ENST00000551317 ANKRD13DQ6ZTN6 518 aa9.66□□□□□ -0.86
EFCAB2-216ENST00000551317 KRT27Q7Z3Y8 459 aa9.66□□□□□ -0.86
EFCAB2-216ENST00000551317 USP44Q9H0E7 712 aa9.66□□□□□ -0.86
EFCAB2-216ENST00000551317 MAP3K15Q6ZN16 1313 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 KCNQ2O43526 872 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 HMMRO75330 724 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 AIMP1Q12904 312 aaKnown RBP9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 MTX1Q13505 466 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 KIF6Q6ZMV9 814 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 FAM196AQ6ZSG2 479 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 C1orf115Q9H7X2 142 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 CCDC87Q9NVE4 849 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 CIZ1Q9ULV3 898 aaPredicted RBP9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 ZBTB1Q9Y2K1 713 aa9.65□□□□□ -0.86
EFCAB2-216ENST00000551317 DDX60Q8IY21 1712 aaKnown RBP9.65□□□□□ -0.87
EFCAB2-216ENST00000551317 LRP5O75197 1615 aa9.64□□□□□ -0.87
EFCAB2-216ENST00000551317 GRM8O00222 908 aa9.64□□□□□ -0.87
EFCAB2-216ENST00000551317 IGKV5-2P06315 115 aa9.64□□□□□ -0.87
EFCAB2-216ENST00000551317 ATP6V1AP38606 617 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms