RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 NNTQ13423 1086 aa6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 SYCP1Q15431 976 aa6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 GBP4Q96PP9 640 aa6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 CCDC85AQ96PX6 553 aaPredicted RBP6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 DNAJC2Q99543 621 aaKnown RBP6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 KLF16Q9BXK1 252 aaPredicted RBP6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 ANKRD30AQ9BXX3 1397 aa6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 POLA1P09884 1462 aaPredicted RBP6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 PLXNC1O60486 1568 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 FHOD3Q2V2M9 1422 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 CYP2E1P05181 493 aaPredicted RBP6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 CAPN2P17655 700 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 CREBRFQ8IUR6 639 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 CALR3Q96L12 384 aaKnown RBP6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 RBSNQ9H1K0 784 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 OGFRQ9NZT2 677 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 UHRF1BP1LA0JNW5 1464 aa6.53□□□□□ -1.36
LSM3P2-201ENST00000551246 RAD50Q92878 1312 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 SHROOM2Q13796 1616 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 VGLL3A8MV65 326 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 GFRA3O60609 400 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 AVPP01185 164 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 IRX3P78415 501 aaPredicted RBP6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 CBX1P83916 185 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 TSGA10IPQ3SY00 556 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 TRAF7Q6Q0C0 670 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 RNF135Q8IUD6 432 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 CCDC116Q8IYX3 515 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 NGEFQ8N5V2 710 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 NFATC2IPQ8NCF5 419 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 HPS1Q92902 700 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 C22orf23Q9BZE7 217 aa6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 UPF2Q9HAU5 1272 aaKnown RBP6.52□□□□□ -1.37
LSM3P2-201ENST00000551246 FAM187AA6NFU0 413 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 TIMP2P16035 220 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 PPP1R26Q5T8A7 1209 aaPredicted RBP6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 PIBF1Q8WXW3 757 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 KIF2CQ99661 725 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 TSPYL1Q9H0U9 437 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 TMPRSS4Q9NRS4 437 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 GEMIN8Q9NWZ8 242 aaKnown RBP6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 BCCIPQ9P287 314 aaKnown RBP eCLIP6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 WASF2Q9Y6W5 498 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 MORC2Q9Y6X9 1032 aaPredicted RBP6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 GPRASP1Q5JY77 1395 aa6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 NKTRP30414 1462 aaKnown RBP6.51□□□□□ -1.37
LSM3P2-201ENST00000551246 SUPT6HQ7KZ85 1726 aaKnown RBP6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 BAG4O95429 457 aaKnown RBP6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 RAB15P59190 212 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 SLFNL1Q499Z3 407 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 CFAP70Q5T0N1 1121 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 RNF20Q5VTR2 975 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 CCDC82Q8N4S0 544 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 PLPP7Q8NBV4 271 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 PMFBP1Q8TBY8 1022 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 ITPKCQ96DU7 683 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 CDCA7Q9BWT1 371 aaPredicted RBP6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 PPP1R12CQ9BZL4 782 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 EFCC1Q9HA90 598 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 LMBRD1Q9NUN5 540 aa6.5□□□□□ -1.37
LSM3P2-201ENST00000551246 CFTRP13569 1480 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 GRIN2AQ12879 1464 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 SENP3-EIF4A1A0A087X0R7 540 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 PALM3A6NDB9 673 aaPredicted RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 ATP9BO43861 1147 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 LILRA1O75019 489 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 SCTRP47872 440 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 DHX9Q08211 1270 aaKnown RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 LAPTM4AQ15012 233 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 TERF2Q15554 542 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 ZSCAN23Q3MJ62 389 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 DNTTIP2Q5QJE6 756 aaKnown RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 CCDC125Q86Z20 511 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 HSCBQ8IWL3 235 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 ZNF784Q8NCA9 323 aaPredicted RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 IRX2Q9BZI1 471 aaPredicted RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 CGNQ9P2M7 1197 aaKnown RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 CTNNA3Q9UI47 895 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 DDX41Q9UJV9 622 aaKnown RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 MAFBQ9Y5Q3 323 aaPredicted RBP6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 MAGI3Q5TCQ9 1506 aa6.49□□□□□ -1.37
LSM3P2-201ENST00000551246 COL17A1Q9UMD9 1497 aaPredicted RBP6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 KANK1Q14678 1352 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 LAMC1P11047 1609 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 USP17L5A8MUK1 530 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 LCE2BO14633 110 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 DGAT1O75907 488 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 SKIP12755 728 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 KCNJ4P48050 445 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 ERVK-9P63128 1117 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 KIAA2012Q0VF49 1180 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 PDCL2Q8N4E4 241 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 TIGD1Q96MW7 591 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 ZFAND3Q9H8U3 227 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 RRP7BPQ9NSQ0 103 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms