RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
ERBB3-219ENST00000551242 DNAJC25Q9H1X3 360 aa14.53□□□□□ -0.08
ERBB3-219ENST00000551242 TFIP11Q9UBB9 837 aaKnown RBP14.53□□□□□ -0.08
ERBB3-219ENST00000551242 TIGD1Q96MW7 591 aa14.53□□□□□ -0.08
ERBB3-219ENST00000551242 CDC37L1Q7L3B6 337 aa14.52□□□□□ -0.08
ERBB3-219ENST00000551242 JAKMIP1Q96N16 626 aaKnown RBP14.52□□□□□ -0.09
ERBB3-219ENST00000551242 TRMT1Q9NXH9 659 aaKnown RBP14.52□□□□□ -0.09
ERBB3-219ENST00000551242 CDK12Q9NYV4 1490 aaPredicted RBP14.52□□□□□ -0.09
ERBB3-219ENST00000551242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.51□□□□□ -0.09
ERBB3-219ENST00000551242 ZNF165P49910 485 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 KRT85P78386 507 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 SIGLEC1Q9BZZ2 1709 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 NCKAP5LQ9HCH0 1330 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 ME3Q16798 604 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
ERBB3-219ENST00000551242 PDRG1Q9NUG6 133 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 NEO1Q92859 1461 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 RIMBP3CA6NJZ7 1639 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 RIMBP3BA6NNM3 1639 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 RIMBP3Q9UFD9 1639 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 GOLGA6L4A6NEF3 574 aa14.51□□□□□ -0.09
ERBB3-219ENST00000551242 FOXO3O43524 673 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 COL9A3Q14050 684 aaPredicted RBP14.5□□□□□ -0.09
ERBB3-219ENST00000551242 PTPN14Q15678 1187 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 PI4K2BQ8TCG2 481 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 COG3Q96JB2 828 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 ZNF446Q9NWS9 450 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 GNAI3P08754 354 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 PRPF40BQ6NWY9 871 aaKnown RBP14.5□□□□□ -0.09
ERBB3-219ENST00000551242 LRRC8AQ8IWT6 810 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 TDRD7Q8NHU6 1098 aaKnown RBP14.5□□□□□ -0.09
ERBB3-219ENST00000551242 IPO4Q8TEX9 1081 aaKnown RBP14.5□□□□□ -0.09
ERBB3-219ENST00000551242 TSPYL4Q9UJ04 414 aa14.5□□□□□ -0.09
ERBB3-219ENST00000551242 NR1I2O75469 434 aa14.49□□□□□ -0.09
ERBB3-219ENST00000551242 CAPN2P17655 700 aa14.49□□□□□ -0.09
ERBB3-219ENST00000551242 PTH1RQ03431 593 aa14.49□□□□□ -0.09
ERBB3-219ENST00000551242 EIF4A2Q14240 407 aaKnown RBP14.49□□□□□ -0.09
ERBB3-219ENST00000551242 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
ERBB3-219ENST00000551242 CLTCQ00610 1675 aaKnown RBP14.49□□□□□ -0.09
ERBB3-219ENST00000551242 SURF6O75683 361 aaKnown RBP14.49□□□□□ -0.09
ERBB3-219ENST00000551242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.49□□□□□ -0.09
ERBB3-219ENST00000551242 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
ERBB3-219ENST00000551242 ERBB3P21860 1342 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 EPB41L2O43491 1005 aaKnown RBP14.48□□□□□ -0.09
ERBB3-219ENST00000551242 SKILP12757 684 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 SPATA32Q96LK8 384 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 FAM53CQ9NYF3 392 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 FLIIQ13045 1269 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 FILIP1Q7Z7B0 1213 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 GTF3C6Q969F1 213 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 USP16Q9Y5T5 823 aa14.48□□□□□ -0.09
ERBB3-219ENST00000551242 NYAP1Q6ZVC0 841 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 SYTL4Q96C24 671 aaPredicted RBP14.47□□□□□ -0.09
ERBB3-219ENST00000551242 TCEANC2Q96MN5 208 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 TPCN1Q9ULQ1 816 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 PIK3C2BO00750 1634 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 A0A087WWV3 80 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 VPS53Q5VIR6 699 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 STK31Q9BXU1 1019 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 CLSTN2Q9H4D0 955 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 CYP46A1Q9Y6A2 500 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 AOX1Q06278 1338 aa14.47□□□□□ -0.09
ERBB3-219ENST00000551242 SOS1Q07889 1333 aaPredicted RBP14.47□□□□□ -0.09
ERBB3-219ENST00000551242 ERO1AQ96HE7 468 aa14.46□□□□□ -0.09
ERBB3-219ENST00000551242 CCDC171Q6TFL3 1326 aa14.46□□□□□ -0.09
ERBB3-219ENST00000551242 DIP2CQ9Y2E4 1556 aa14.46□□□□□ -0.09
ERBB3-219ENST00000551242 CNTROBQ8N137 903 aa14.46□□□□□ -0.09
ERBB3-219ENST00000551242 BICD2Q8TD16 824 aa14.46□□□□□ -0.09
ERBB3-219ENST00000551242 USP44Q9H0E7 712 aa14.46□□□□□ -0.09
ERBB3-219ENST00000551242 SH2B1Q9NRF2 756 aaPredicted RBP14.46□□□□□ -0.09
ERBB3-219ENST00000551242 CALCOCO1Q9P1Z2 691 aa14.46□□□□□ -0.09
ERBB3-219ENST00000551242 LRRN4CLQ8ND94 238 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 RHPN1Q8TCX5 695 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 ZSCAN31Q96LW9 406 aaPredicted RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 NOL10Q9BSC4 688 aaKnown RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 CRB1P82279 1406 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 ELP1O95163 1332 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 TTC21AQ8NDW8 1320 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 ATP7BP35670 1465 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 AATKQ6ZMQ8 1374 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 CCDC69A6NI79 296 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 ERCC6LQ2NKX8 1250 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 PPP1R42Q7Z4L9 355 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 LEO1Q8WVC0 666 aaPredicted RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 DDX19AQ9NUU7 478 aaKnown RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 SOX12O15370 315 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 SLU7O95391 586 aaKnown RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 UBTFL1P0CB47 393 aaPredicted RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 HNRNPH2P55795 449 aaKnown RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 RBM43Q6ZSC3 357 aaKnown RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 C11orf57Q6ZUT1 292 aaPredicted RBP14.45□□□□□ -0.1
ERBB3-219ENST00000551242 PGBD1Q96JS3 809 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 ZSWIM6Q9HCJ5 1215 aa14.45□□□□□ -0.1
ERBB3-219ENST00000551242 NPHP3Q7Z494 1330 aa14.44□□□□□ -0.1
ERBB3-219ENST00000551242 GOLGA6L19H0YKK7 550 aa14.44□□□□□ -0.1
ERBB3-219ENST00000551242 LARP1Q6PKG0 1096 aaKnown RBP14.44□□□□□ -0.1
ERBB3-219ENST00000551242 EDC4Q6P2E9 1401 aaKnown RBP14.44□□□□□ -0.1
ERBB3-219ENST00000551242 PREX1Q8TCU6 1659 aa14.44□□□□□ -0.1
ERBB3-219ENST00000551242 TULP2O00295 520 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms