RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 HCN4Q9Y3Q4 1203 aa9.61□□□□□ -0.87
GPN3-209ENST00000551079 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 ARHGEF15O94989 841 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 MAPTP10636 758 aaKnown RBP9.6□□□□□ -0.87
GPN3-209ENST00000551079 BCRP11274 1271 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 IGFBP4P22692 258 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 TNP2Q05952 138 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 LRRC69Q6ZNQ3 347 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 C14orf37Q86TY3 774 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
GPN3-209ENST00000551079 KLRG1Q96E93 195 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 PHACTR1Q9C0D0 580 aa9.6□□□□□ -0.87
GPN3-209ENST00000551079 NOVA2Q9UNW9 492 aaKnown RBP9.6□□□□□ -0.87
GPN3-209ENST00000551079 ARID3CA6NKF2 412 aa9.59□□□□□ -0.87
GPN3-209ENST00000551079 CTBSQ01459 385 aa9.59□□□□□ -0.87
GPN3-209ENST00000551079 ELOAQ14241 798 aaKnown RBP9.59□□□□□ -0.87
GPN3-209ENST00000551079 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
GPN3-209ENST00000551079 GDF2Q9UK05 429 aaPredicted RBP9.59□□□□□ -0.87
GPN3-209ENST00000551079 LAMC2Q13753 1193 aa9.58□□□□□ -0.88
GPN3-209ENST00000551079 FAM182BQ5T319 152 aa9.58□□□□□ -0.88
GPN3-209ENST00000551079 ALDH16A1Q8IZ83 802 aa9.58□□□□□ -0.88
GPN3-209ENST00000551079 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
GPN3-209ENST00000551079 LGR5O75473 907 aa9.57□□□□□ -0.88
GPN3-209ENST00000551079 SRPK2P78362 688 aaKnown RBP9.57□□□□□ -0.88
GPN3-209ENST00000551079 HIF1AQ16665 826 aa9.57□□□□□ -0.88
GPN3-209ENST00000551079 GOLGA6L1Q8N7Z2 621 aa9.57□□□□□ -0.88
GPN3-209ENST00000551079 RNF225M0QZC1 329 aaPredicted RBP9.56□□□□□ -0.88
GPN3-209ENST00000551079 C2CD2LO14523 706 aa9.56□□□□□ -0.88
GPN3-209ENST00000551079 EFSO43281 561 aa9.56□□□□□ -0.88
GPN3-209ENST00000551079 OIP5O43482 229 aa9.56□□□□□ -0.88
GPN3-209ENST00000551079 CD33P20138 364 aa9.56□□□□□ -0.88
GPN3-209ENST00000551079 WEE1P30291 646 aa9.56□□□□□ -0.88
GPN3-209ENST00000551079 MARSP56192 900 aaKnown RBP9.56□□□□□ -0.88
GPN3-209ENST00000551079 MARK1Q9P0L2 795 aa9.56□□□□□ -0.88
GPN3-209ENST00000551079 FOXO3O43524 673 aa9.55□□□□□ -0.88
GPN3-209ENST00000551079 SWI5Q1ZZU3 235 aa9.55□□□□□ -0.88
GPN3-209ENST00000551079 NEDD1Q8NHV4 660 aa9.55□□□□□ -0.88
GPN3-209ENST00000551079 PBXIP1Q96AQ6 731 aa9.55□□□□□ -0.88
GPN3-209ENST00000551079 NGLY1Q96IV0 654 aa9.55□□□□□ -0.88
GPN3-209ENST00000551079 ACIN1Q9UKV3 1341 aaKnown RBP9.55□□□□□ -0.88
GPN3-209ENST00000551079 ATG7O95352 703 aa9.54□□□□□ -0.88
GPN3-209ENST00000551079 ARAFP10398 606 aa9.54□□□□□ -0.88
GPN3-209ENST00000551079 SUSD3Q96L08 255 aa9.54□□□□□ -0.88
GPN3-209ENST00000551079 ZMIZ1Q9ULJ6 1067 aa9.54□□□□□ -0.88
GPN3-209ENST00000551079 RTN1Q16799 776 aa9.53□□□□□ -0.88
GPN3-209ENST00000551079 ERICH6Q7L0X2 663 aa9.53□□□□□ -0.88
GPN3-209ENST00000551079 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
GPN3-209ENST00000551079 VTI1AQ96AJ9 217 aa9.53□□□□□ -0.88
GPN3-209ENST00000551079 SCARF2Q96GP6 870 aaPredicted RBP9.53□□□□□ -0.88
GPN3-209ENST00000551079 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
GPN3-209ENST00000551079 AVENQ9NQS1 362 aaPredicted RBP9.53□□□□□ -0.88
GPN3-209ENST00000551079 GGA1Q9UJY5 639 aa9.53□□□□□ -0.88
GPN3-209ENST00000551079 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
GPN3-209ENST00000551079 SLCO4C1Q6ZQN7 724 aa9.52□□□□□ -0.89
GPN3-209ENST00000551079 CEP63Q96MT8 703 aa9.52□□□□□ -0.89
GPN3-209ENST00000551079 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.52□□□□□ -0.892e-6■■■■■ 96.1
GPN3-209ENST00000551079 STRN4Q9NRL3 753 aa9.52□□□□□ -0.89
GPN3-209ENST00000551079 PRR12Q9ULL5 1215 aa9.52□□□□□ -0.89
GPN3-209ENST00000551079 DNMT3AQ9Y6K1 912 aaPredicted RBP9.52□□□□□ -0.89
GPN3-209ENST00000551079 ADH6P28332 368 aa9.51□□□□□ -0.89
GPN3-209ENST00000551079 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
GPN3-209ENST00000551079 CCDC82Q8N4S0 544 aa9.51□□□□□ -0.89
GPN3-209ENST00000551079 ZNF280CQ8ND82 737 aa9.51□□□□□ -0.89
GPN3-209ENST00000551079 EDARADDQ8WWZ3 215 aa9.51□□□□□ -0.89
GPN3-209ENST00000551079 BRD7Q9NPI1 651 aa9.51□□□□□ -0.89
GPN3-209ENST00000551079 ZNF468Q5VIY5 522 aaPredicted RBP9.5□□□□□ -0.89
GPN3-209ENST00000551079 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
GPN3-209ENST00000551079 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
GPN3-209ENST00000551079 NEURL1BA8MQ27 555 aa9.49□□□□□ -0.89
GPN3-209ENST00000551079 C1orf229Q6ZS94 237 aaPredicted RBP9.49□□□□□ -0.89
GPN3-209ENST00000551079 BTLAQ7Z6A9 289 aa9.49□□□□□ -0.89
GPN3-209ENST00000551079 SHISA8B8ZZ34 492 aa9.48□□□□□ -0.89
GPN3-209ENST00000551079 EPXP11678 715 aa9.48□□□□□ -0.89
GPN3-209ENST00000551079 KCNQ4P56696 695 aa9.48□□□□□ -0.89
GPN3-209ENST00000551079 TYRO3Q06418 890 aa9.48□□□□□ -0.89
GPN3-209ENST00000551079 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
GPN3-209ENST00000551079 SFSWAPQ12872 951 aaKnown RBP9.48□□□□□ -0.89
GPN3-209ENST00000551079 IER5Q5VY09 327 aa9.48□□□□□ -0.89
GPN3-209ENST00000551079 BEND7Q8N7W2 519 aaPredicted RBP9.48□□□□□ -0.89
GPN3-209ENST00000551079 TGFBR3LH3BV60 316 aa9.47□□□□□ -0.89
GPN3-209ENST00000551079 PRMT3O60678 531 aa9.47□□□□□ -0.89
GPN3-209ENST00000551079 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
GPN3-209ENST00000551079 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
GPN3-209ENST00000551079 KCNH4Q9UQ05 1017 aa9.47□□□□□ -0.89
GPN3-209ENST00000551079 PHF20L1A8MW92 1017 aa9.46□□□□□ -0.9
GPN3-209ENST00000551079 AMPD1P23109 780 aa9.46□□□□□ -0.9
GPN3-209ENST00000551079 PCBP4P57723 403 aaKnown RBP9.46□□□□□ -0.9
GPN3-209ENST00000551079 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
GPN3-209ENST00000551079 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
GPN3-209ENST00000551079 MYO19Q96H55 970 aa9.46□□□□□ -0.9
GPN3-209ENST00000551079 QTRT2Q9H974 415 aaKnown RBP9.46□□□□□ -0.9
GPN3-209ENST00000551079 KLF15Q9UIH9 416 aa9.46□□□□□ -0.9
GPN3-209ENST00000551079 FKBP5Q13451 457 aaPredicted RBP9.45□□□□□ -0.9
GPN3-209ENST00000551079 OCLNQ16625 522 aa9.45□□□□□ -0.9
GPN3-209ENST00000551079 SYT9Q86SS6 491 aa9.45□□□□□ -0.9
GPN3-209ENST00000551079 FCHSD1Q86WN1 690 aa9.45□□□□□ -0.9
GPN3-209ENST00000551079 C1orf115Q9H7X2 142 aa9.45□□□□□ -0.9
GPN3-209ENST00000551079 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
GPN3-209ENST00000551079 IRS1P35568 1242 aa9.44□□□□□ -0.9
GPN3-209ENST00000551079 RASSF7Q02833 373 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms