RNA–Protein interactions for RNA: ENST00000551052.5

RPH3A-219, Transcript of rabphilin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPH3A, Length 2,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-219ENST00000551052 USP25Q9UHP3 1055 aa12.56□□□□□ -0.4
RPH3A-219ENST00000551052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
RPH3A-219ENST00000551052 ZNF445P59923 1031 aa12.56□□□□□ -0.4
RPH3A-219ENST00000551052 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
RPH3A-219ENST00000551052 PALD1Q9ULE6 856 aa12.56□□□□□ -0.4
RPH3A-219ENST00000551052 ZKSCAN5Q9Y2L8 839 aa12.56□□□□□ -0.4
RPH3A-219ENST00000551052 AMOTQ4VCS5 1084 aa12.55□□□□□ -0.4
RPH3A-219ENST00000551052 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
RPH3A-219ENST00000551052 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
RPH3A-219ENST00000551052 KLHDC4Q8TBB5 520 aa12.55□□□□□ -0.4
RPH3A-219ENST00000551052 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
RPH3A-219ENST00000551052 CBX1P83916 185 aa12.54□□□□□ -0.4
RPH3A-219ENST00000551052 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
RPH3A-219ENST00000551052 MST1RQ04912 1400 aa12.54□□□□□ -0.4
RPH3A-219ENST00000551052 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
RPH3A-219ENST00000551052 ZNF496Q96IT1 587 aaPredicted RBP12.54□□□□□ -0.4
RPH3A-219ENST00000551052 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
RPH3A-219ENST00000551052 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPH3A-219ENST00000551052 IBTKQ9P2D0 1353 aaPredicted RBP12.53□□□□□ -0.4
RPH3A-219ENST00000551052 CYP27B1O15528 508 aa12.53□□□□□ -0.4
RPH3A-219ENST00000551052 SPC24Q8NBT2 197 aa12.53□□□□□ -0.4
RPH3A-219ENST00000551052 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
RPH3A-219ENST00000551052 USP54Q70EL1 1684 aa12.53□□□□□ -0.4
RPH3A-219ENST00000551052 MEGF6O75095 1541 aa12.53□□□□□ -0.4
RPH3A-219ENST00000551052 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
RPH3A-219ENST00000551052 SIL1Q9H173 461 aa12.53□□□□□ -0.4
RPH3A-219ENST00000551052 SALL3Q9BXA9 1300 aa12.52□□□□□ -0.4
RPH3A-219ENST00000551052 ERC2O15083 957 aa12.52□□□□□ -0.4
RPH3A-219ENST00000551052 ZNF790Q6PG37 636 aa12.52□□□□□ -0.4
RPH3A-219ENST00000551052 SLIT3O75094 1523 aa12.52□□□□□ -0.41
RPH3A-219ENST00000551052 TRPM3Q9HCF6 1732 aaPredicted RBP12.52□□□□□ -0.41
RPH3A-219ENST00000551052 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
RPH3A-219ENST00000551052 REC8O95072 547 aa12.52□□□□□ -0.41
RPH3A-219ENST00000551052 PHKG2P15735 406 aa12.52□□□□□ -0.41
RPH3A-219ENST00000551052 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
RPH3A-219ENST00000551052 RHPN1Q8TCX5 695 aa12.52□□□□□ -0.41
RPH3A-219ENST00000551052 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
RPH3A-219ENST00000551052 NPHP3Q7Z494 1330 aa12.52□□□□□ -0.41
RPH3A-219ENST00000551052 ZNF335Q9H4Z2 1342 aaPredicted RBP12.52□□□□□ -0.41
RPH3A-219ENST00000551052 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
RPH3A-219ENST00000551052 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 FIBPO43427 364 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 CPA1P15085 419 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 PDIA6Q15084 440 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 STRN4Q9NRL3 753 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 KDM6AO15550 1401 aaPredicted RBP12.51□□□□□ -0.41
RPH3A-219ENST00000551052 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
RPH3A-219ENST00000551052 XAGE3Q8WTP9 111 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
RPH3A-219ENST00000551052 BRINP3Q76B58 766 aa12.5□□□□□ -0.41
RPH3A-219ENST00000551052 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
RPH3A-219ENST00000551052 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
RPH3A-219ENST00000551052 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
RPH3A-219ENST00000551052 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
RPH3A-219ENST00000551052 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
RPH3A-219ENST00000551052 RIC3Q7Z5B4 369 aa12.5□□□□□ -0.41
RPH3A-219ENST00000551052 USP48Q86UV5 1035 aa12.5□□□□□ -0.41
RPH3A-219ENST00000551052 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
RPH3A-219ENST00000551052 CCDC9Q9Y3X0 531 aaKnown RBP12.5□□□□□ -0.41
RPH3A-219ENST00000551052 CHMLP26374 656 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 KAZALD1Q96I82 304 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 PDLIM2Q96JY6 352 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
RPH3A-219ENST00000551052 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 KDM3BQ7LBC6 1761 aa12.49□□□□□ -0.41
RPH3A-219ENST00000551052 IGKV5-2P06315 115 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 POLA2Q14181 598 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 MYD88Q99836 296 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
RPH3A-219ENST00000551052 EPHA10Q5JZY3 1008 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 CCDC8Q9H0W5 538 aaPredicted RBP12.48□□□□□ -0.41
RPH3A-219ENST00000551052 NDUFB9Q9Y6M9 179 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 SPATA31A3Q5VYP0 1347 aa12.48□□□□□ -0.41
RPH3A-219ENST00000551052 ADCY5O95622 1261 aa12.47□□□□□ -0.41
RPH3A-219ENST00000551052 SASS6Q6UVJ0 657 aa12.47□□□□□ -0.41
RPH3A-219ENST00000551052 PI4K2BQ8TCG2 481 aa12.47□□□□□ -0.41
RPH3A-219ENST00000551052 TLR7Q9NYK1 1049 aaKnown RBP12.47□□□□□ -0.41
RPH3A-219ENST00000551052 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
RPH3A-219ENST00000551052 HOXB7P09629 217 aa12.47□□□□□ -0.41
RPH3A-219ENST00000551052 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
RPH3A-219ENST00000551052 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
RPH3A-219ENST00000551052 ZNF330Q9Y3S2 320 aaPredicted RBP12.47□□□□□ -0.41
RPH3A-219ENST00000551052 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
RPH3A-219ENST00000551052 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
RPH3A-219ENST00000551052 CABP4P57796 275 aa12.46□□□□□ -0.42
RPH3A-219ENST00000551052 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.42
RPH3A-219ENST00000551052 CLEC17AQ6ZS10 378 aa12.46□□□□□ -0.42
RPH3A-219ENST00000551052 ALS2Q96Q42 1657 aa12.46□□□□□ -0.42
RPH3A-219ENST00000551052 KAT6BQ8WYB5 2073 aa12.45□□□□□ -0.42
RPH3A-219ENST00000551052 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms