RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 GJA3Q9Y6H8 435 aa15.85■□□□□ 0.13
GPN3-208ENST00000550974 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
GPN3-208ENST00000550974 FZD9O00144 591 aa15.84■□□□□ 0.13
GPN3-208ENST00000550974 FKBP4Q02790 459 aaKnown RBP eCLIP15.84■□□□□ 0.13
GPN3-208ENST00000550974 PRR5LQ6MZQ0 368 aa15.84■□□□□ 0.13
GPN3-208ENST00000550974 SLX4Q8IY92 1834 aa15.84■□□□□ 0.13
GPN3-208ENST00000550974 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
GPN3-208ENST00000550974 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
GPN3-208ENST00000550974 HHIPL1Q96JK4 782 aa15.83■□□□□ 0.12
GPN3-208ENST00000550974 HPS5Q9UPZ3 1129 aa15.83■□□□□ 0.12
GPN3-208ENST00000550974 ZBTB1Q9Y2K1 713 aa15.83■□□□□ 0.12
GPN3-208ENST00000550974 ST20-MTHFSA0A0A6YYL1 179 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 NPHP1O15259 732 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 SRGNP10124 158 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 EPS15P42566 896 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 MTHFSP49914 203 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 NOGQ13253 232 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 CTU1Q7Z7A3 348 aaKnown RBP15.82■□□□□ 0.12
GPN3-208ENST00000550974 MASTLQ96GX5 879 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 ZNF408Q9H9D4 720 aa15.82■□□□□ 0.12
GPN3-208ENST00000550974 CYP19A1P11511 503 aaPredicted RBP15.81■□□□□ 0.12
GPN3-208ENST00000550974 C7orf43Q8WVR3 580 aa15.81■□□□□ 0.12
GPN3-208ENST00000550974 TRPM7Q96QT4 1865 aa15.81■□□□□ 0.12
GPN3-208ENST00000550974 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
GPN3-208ENST00000550974 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
GPN3-208ENST00000550974 USP50Q70EL3 339 aaPredicted RBP15.8■□□□□ 0.12
GPN3-208ENST00000550974 CACNA1SQ13698 1873 aa15.8■□□□□ 0.12
GPN3-208ENST00000550974 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
GPN3-208ENST00000550974 AKAP4Q5JQC9 854 aa15.79■□□□□ 0.12
GPN3-208ENST00000550974 ZNF530Q6P9A1 599 aaPredicted RBP15.79■□□□□ 0.12
GPN3-208ENST00000550974 OLFM4Q6UX06 510 aa15.79■□□□□ 0.12
GPN3-208ENST00000550974 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
GPN3-208ENST00000550974 TRPA1O75762 1119 aa15.78■□□□□ 0.12
GPN3-208ENST00000550974 SCNN1DP51172 638 aa15.78■□□□□ 0.12
GPN3-208ENST00000550974 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
GPN3-208ENST00000550974 PLEKHO1Q53GL0 409 aaPredicted RBP15.78■□□□□ 0.12
GPN3-208ENST00000550974 JDP2Q8WYK2 163 aa15.78■□□□□ 0.12
GPN3-208ENST00000550974 SAGE1Q9NXZ1 904 aa15.78■□□□□ 0.12
GPN3-208ENST00000550974 RTKN2Q8IZC4 609 aa15.77■□□□□ 0.12
GPN3-208ENST00000550974 SYNE4Q8N205 404 aa15.77■□□□□ 0.12
GPN3-208ENST00000550974 CNBD1Q8NA66 436 aa15.77■□□□□ 0.12
GPN3-208ENST00000550974 GLIS2Q9BZE0 524 aaPredicted RBP15.77■□□□□ 0.12
GPN3-208ENST00000550974 ST5P78524 1137 aa15.76■□□□□ 0.11
GPN3-208ENST00000550974 SLC17A8Q8NDX2 589 aa15.76■□□□□ 0.11
GPN3-208ENST00000550974 RNF186Q9NXI6 227 aa15.76■□□□□ 0.11
GPN3-208ENST00000550974 C1orf141Q5JVX7 400 aa15.75■□□□□ 0.11
GPN3-208ENST00000550974 KIF23Q02241 960 aaPredicted RBP15.74■□□□□ 0.11
GPN3-208ENST00000550974 ARFGEF2Q9Y6D5 1785 aa15.73■□□□□ 0.11
GPN3-208ENST00000550974 HUNKP57058 714 aa15.73■□□□□ 0.11
GPN3-208ENST00000550974 EIF4A2Q14240 407 aaKnown RBP15.73■□□□□ 0.11
GPN3-208ENST00000550974 SETDB2Q96T68 719 aa15.73■□□□□ 0.11
GPN3-208ENST00000550974 A0A087WZG4 1122 aa15.72■□□□□ 0.11
GPN3-208ENST00000550974 PKN2Q16513 984 aaKnown RBP15.72■□□□□ 0.11
GPN3-208ENST00000550974 AMOTQ4VCS5 1084 aa15.72■□□□□ 0.11
GPN3-208ENST00000550974 ZNF330Q9Y3S2 320 aaPredicted RBP15.72■□□□□ 0.11
GPN3-208ENST00000550974 NPR1P16066 1061 aa15.71■□□□□ 0.11
GPN3-208ENST00000550974 EIF5P55010 431 aaKnown RBP15.71■□□□□ 0.11
GPN3-208ENST00000550974 SLC39A6Q13433 755 aa15.71■□□□□ 0.11
GPN3-208ENST00000550974 ADARB2Q9NS39 739 aaKnown RBP15.71■□□□□ 0.11
GPN3-208ENST00000550974 HDAC9Q9UKV0 1011 aa15.71■□□□□ 0.11
GPN3-208ENST00000550974 TBC1D2BQ9UPU7 963 aa15.71■□□□□ 0.11
GPN3-208ENST00000550974 ANKRD26Q9UPS8 1709 aa15.71■□□□□ 0.1
GPN3-208ENST00000550974 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
GPN3-208ENST00000550974 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
GPN3-208ENST00000550974 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
GPN3-208ENST00000550974 KIF20BQ96Q89 1820 aa15.7■□□□□ 0.1
GPN3-208ENST00000550974 NEUROD1Q13562 356 aa15.69■□□□□ 0.1
GPN3-208ENST00000550974 COLQQ9Y215 455 aaPredicted RBP15.69■□□□□ 0.1
GPN3-208ENST00000550974 TESK2Q96S53 571 aa15.68■□□□□ 0.1
GPN3-208ENST00000550974 GPRC5DQ9NZD1 345 aa15.68■□□□□ 0.1
GPN3-208ENST00000550974 BCORQ6W2J9 1755 aa15.67■□□□□ 0.1
GPN3-208ENST00000550974 COL4A5P29400 1685 aa15.67■□□□□ 0.1
GPN3-208ENST00000550974 CDC37L1Q7L3B6 337 aa15.67■□□□□ 0.1
GPN3-208ENST00000550974 LARGE2Q8N3Y3 721 aa15.67■□□□□ 0.1
GPN3-208ENST00000550974 CCDC102AQ96A19 550 aa15.67■□□□□ 0.1
GPN3-208ENST00000550974 PSMD1Q99460 953 aa15.67■□□□□ 0.1
GPN3-208ENST00000550974 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
GPN3-208ENST00000550974 ZNF157P51786 506 aaPredicted RBP15.66■□□□□ 0.1
GPN3-208ENST00000550974 CSRNP1Q96S65 589 aa15.66■□□□□ 0.1
GPN3-208ENST00000550974 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
GPN3-208ENST00000550974 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
GPN3-208ENST00000550974 STARD3NLO95772 234 aa15.65■□□□□ 0.1
GPN3-208ENST00000550974 PGAP2Q9UHJ9 254 aa15.65■□□□□ 0.1
GPN3-208ENST00000550974 DLK2Q6UY11 383 aa15.64■□□□□ 0.09
GPN3-208ENST00000550974 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
GPN3-208ENST00000550974 NBPF5PQ86XG9 351 aaPredicted RBP15.64■□□□□ 0.09
GPN3-208ENST00000550974 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
GPN3-208ENST00000550974 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
GPN3-208ENST00000550974 FBXO46Q6PJ61 603 aaPredicted RBP15.63■□□□□ 0.09
GPN3-208ENST00000550974 ZNF296Q8WUU4 475 aaPredicted RBP15.63■□□□□ 0.09
GPN3-208ENST00000550974 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
GPN3-208ENST00000550974 SCN7AQ01118 1682 aa15.63■□□□□ 0.09
GPN3-208ENST00000550974 POTEFA5A3E0 1075 aa15.62■□□□□ 0.09
GPN3-208ENST00000550974 HIRAP54198 1017 aaPredicted RBP15.62■□□□□ 0.09
GPN3-208ENST00000550974 NPM2Q86SE8 214 aaKnown RBP15.62■□□□□ 0.09
GPN3-208ENST00000550974 AEBP1Q8IUX7 1158 aa15.62■□□□□ 0.09
GPN3-208ENST00000550974 NIM1KQ8IY84 436 aa15.62■□□□□ 0.09
GPN3-208ENST00000550974 ZC3H15Q8WU90 426 aaKnown RBP15.62■□□□□ 0.09
GPN3-208ENST00000550974 CARD14Q9BXL6 1004 aa15.62■□□□□ 0.09
GPN3-208ENST00000550974 KLRG2A4D1S0 409 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms