RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
SCAF11-214ENST00000550893 LARP1Q6PKG0 1096 aaKnown RBP8.53□□□□□ -1.04
SCAF11-214ENST00000550893 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
SCAF11-214ENST00000550893 WHAMMQ8TF30 809 aa8.53□□□□□ -1.04
SCAF11-214ENST00000550893 VRTNQ9H8Y1 702 aa8.53□□□□□ -1.04
SCAF11-214ENST00000550893 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
SCAF11-214ENST00000550893 NOS2P35228 1153 aa8.52□□□□□ -1.05
SCAF11-214ENST00000550893 TXLNAP40222 546 aa8.52□□□□□ -1.05
SCAF11-214ENST00000550893 PTK7Q13308 1070 aa8.52□□□□□ -1.05
SCAF11-214ENST00000550893 TEAD4Q15561 434 aa8.52□□□□□ -1.05
SCAF11-214ENST00000550893 ZNF385CQ66K41 422 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-214ENST00000550893 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
SCAF11-214ENST00000550893 TSPAN10Q9H1Z9 355 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-214ENST00000550893 ZDHHC3Q9NYG2 299 aa8.52□□□□□ -1.05
SCAF11-214ENST00000550893 KIF27Q86VH2 1401 aa8.52□□□□□ -1.05
SCAF11-214ENST00000550893 TATP17735 454 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-214ENST00000550893 MX2P20592 715 aa8.51□□□□□ -1.05
SCAF11-214ENST00000550893 SEC13P55735 322 aa8.51□□□□□ -1.05
SCAF11-214ENST00000550893 ARSJQ5FYB0 599 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-214ENST00000550893 CHMP7Q8WUX9 453 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-214ENST00000550893 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
SCAF11-214ENST00000550893 CFHR5Q9BXR6 569 aa8.51□□□□□ -1.05
SCAF11-214ENST00000550893 KIAA0586Q9BVV6 1533 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 A0A1W2PNR3 127 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 FAM196BA6NMK8 535 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L15C9J2P7 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L10C9JJH3 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L13C9JLJ4 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L12C9JPN9 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L11C9JVI0 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L21D6R901 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L18D6R9N7 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L22D6RA61 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L17D6RBQ6 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L19D6RCP7 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L20D6RJB6 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 BNIP3LO60238 219 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 RFX1P22670 979 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 USP17L24Q0WX57 530 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 DPYDQ12882 1025 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 CDCA8Q53HL2 280 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 SH3PXD2AQ5TCZ1 1133 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 NDFIP2Q9NV92 336 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 ZNF232Q9UNY5 417 aa8.5□□□□□ -1.05
SCAF11-214ENST00000550893 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 IQGAP2Q13576 1575 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 SERTM1A2A2V5 107 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 NLRP8Q86W28 1048 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 SVOPQ8N4V2 548 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 ABHD17AQ96GS6 310 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 ZCCHC2Q9C0B9 1178 aaKnown RBP8.49□□□□□ -1.05
SCAF11-214ENST00000550893 PHF24Q9UPV7 400 aa8.49□□□□□ -1.05
SCAF11-214ENST00000550893 EML1O00423 815 aa8.48□□□□□ -1.05
SCAF11-214ENST00000550893 C21orf2O43822 256 aa8.48□□□□□ -1.05
SCAF11-214ENST00000550893 PSMA6P60900 246 aaKnown RBP8.48□□□□□ -1.05
SCAF11-214ENST00000550893 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
SCAF11-214ENST00000550893 ANKMY2Q8IV38 441 aa8.48□□□□□ -1.05
SCAF11-214ENST00000550893 ATXN7L1Q9ULK2 861 aaPredicted RBP8.48□□□□□ -1.05
SCAF11-214ENST00000550893 PRXQ9BXM0 1461 aa8.48□□□□□ -1.05
SCAF11-214ENST00000550893 PRG4Q92954 1404 aaPredicted RBP8.47□□□□□ -1.05
SCAF11-214ENST00000550893 LGR5O75473 907 aa8.47□□□□□ -1.05
SCAF11-214ENST00000550893 SUZ12Q15022 739 aaKnown RBP8.47□□□□□ -1.05
SCAF11-214ENST00000550893 CYB5RLQ6IPT4 315 aa8.47□□□□□ -1.05
SCAF11-214ENST00000550893 BICDL1Q6ZP65 573 aa8.47□□□□□ -1.05
SCAF11-214ENST00000550893 NSFL1CQ9UNZ2 370 aaKnown RBP8.47□□□□□ -1.05
SCAF11-214ENST00000550893 PCDHGC4Q9Y5F7 938 aa8.47□□□□□ -1.05
SCAF11-214ENST00000550893 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
SCAF11-214ENST00000550893 KIAA0556O60303 1618 aa8.47□□□□□ -1.05
SCAF11-214ENST00000550893 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
SCAF11-214ENST00000550893 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
SCAF11-214ENST00000550893 PPP1R12BO60237 982 aaPredicted RBP8.46□□□□□ -1.06
SCAF11-214ENST00000550893 ARHGEF15O94989 841 aa8.46□□□□□ -1.06
SCAF11-214ENST00000550893 CELA2BP08218 269 aaPredicted RBP8.46□□□□□ -1.06
SCAF11-214ENST00000550893 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
SCAF11-214ENST00000550893 C7orf43Q8WVR3 580 aa8.46□□□□□ -1.06
SCAF11-214ENST00000550893 SCG3Q8WXD2 468 aaKnown RBP8.46□□□□□ -1.06
SCAF11-214ENST00000550893 ARXQ96QS3 562 aa8.46□□□□□ -1.06
SCAF11-214ENST00000550893 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
SCAF11-214ENST00000550893 ADAMTS8Q9UP79 889 aa8.46□□□□□ -1.06
SCAF11-214ENST00000550893 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
SCAF11-214ENST00000550893 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.06
SCAF11-214ENST00000550893 DIP2BQ9P265 1576 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 FGFR3P22607 806 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 CTBSQ01459 385 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 ACDQ96AP0 544 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 KLRG1Q96E93 195 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 CHMP3Q9Y3E7 222 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 CARMIL1Q5VZK9 1371 aa8.45□□□□□ -1.06
SCAF11-214ENST00000550893 MAPKBP1O60336 1514 aa8.44□□□□□ -1.06
SCAF11-214ENST00000550893 ARID3CA6NKF2 412 aa8.44□□□□□ -1.06
SCAF11-214ENST00000550893 C2CD2LO14523 706 aa8.44□□□□□ -1.06
SCAF11-214ENST00000550893 MAP2K3P46734 347 aa8.44□□□□□ -1.06
SCAF11-214ENST00000550893 HIRAP54198 1017 aaPredicted RBP8.44□□□□□ -1.06
SCAF11-214ENST00000550893 HCN2Q9UL51 889 aa8.44□□□□□ -1.06
SCAF11-214ENST00000550893 DCDC2BA2VCK2 349 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
SCAF11-214ENST00000550893 TNP2Q05952 138 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 LRRC69Q6ZNQ3 347 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms